Incidental Mutation 'R2156:Trpm1'
ID |
234815 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Trpm1
|
Ensembl Gene |
ENSMUSG00000030523 |
Gene Name |
transient receptor potential cation channel, subfamily M, member 1 |
Synonyms |
Mlsn1, melastatin, 4732499L03Rik, LTRPC1 |
MMRRC Submission |
040159-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R2156 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
7 |
Chromosomal Location |
63803583-63919523 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 63884736 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Phenylalanine
at position 806
(I806F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000146226
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000085222]
[ENSMUST00000206263]
[ENSMUST00000206277]
[ENSMUST00000206314]
|
AlphaFold |
Q2TV84 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000085222
AA Change: I806F
PolyPhen 2
Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
|
SMART Domains |
Protein: ENSMUSP00000082318 Gene: ENSMUSG00000030523 AA Change: I806F
Domain | Start | End | E-Value | Type |
low complexity region
|
8 |
28 |
N/A |
INTRINSIC |
low complexity region
|
183 |
195 |
N/A |
INTRINSIC |
low complexity region
|
289 |
307 |
N/A |
INTRINSIC |
low complexity region
|
456 |
491 |
N/A |
INTRINSIC |
Blast:ANK
|
505 |
533 |
1e-5 |
BLAST |
low complexity region
|
621 |
650 |
N/A |
INTRINSIC |
low complexity region
|
823 |
835 |
N/A |
INTRINSIC |
transmembrane domain
|
876 |
895 |
N/A |
INTRINSIC |
Pfam:Ion_trans
|
907 |
1120 |
6e-16 |
PFAM |
transmembrane domain
|
1150 |
1167 |
N/A |
INTRINSIC |
low complexity region
|
1216 |
1225 |
N/A |
INTRINSIC |
PDB:3E7K|H
|
1228 |
1279 |
1e-7 |
PDB |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000107525
AA Change: I806F
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000103149 Gene: ENSMUSG00000030523 AA Change: I806F
Domain | Start | End | E-Value | Type |
low complexity region
|
8 |
28 |
N/A |
INTRINSIC |
low complexity region
|
183 |
195 |
N/A |
INTRINSIC |
low complexity region
|
289 |
307 |
N/A |
INTRINSIC |
low complexity region
|
456 |
491 |
N/A |
INTRINSIC |
Blast:ANK
|
505 |
533 |
1e-5 |
BLAST |
low complexity region
|
621 |
650 |
N/A |
INTRINSIC |
low complexity region
|
823 |
835 |
N/A |
INTRINSIC |
Pfam:Ion_trans
|
876 |
1138 |
7.6e-22 |
PFAM |
transmembrane domain
|
1156 |
1173 |
N/A |
INTRINSIC |
Pfam:TRPM_tetra
|
1230 |
1285 |
9.4e-28 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000205939
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000206000
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000206263
AA Change: I690F
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000206277
AA Change: I806F
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000206314
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.7%
- 10x: 97.5%
- 20x: 95.6%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the transient receptor potential melastatin subfamily of transient receptor potential ion channels. The encoded protein is a calcium permeable cation channel that is expressed in melanocytes and may play a role in melanin synthesis. Specific mutations in this gene are the cause autosomal recessive complete congenital stationary night blindness-1C. The expression of this protein is inversely correlated with melanoma aggressiveness and as such it is used as a prognostic marker for melanoma metastasis. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2011] PHENOTYPE: Homozygous mutants have defects in rod and cone electrophysiology affecting the photoresponses. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 85 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1810065E05Rik |
T |
A |
11: 58,313,134 (GRCm39) |
|
probably null |
Het |
Acaa2 |
T |
C |
18: 74,926,476 (GRCm39) |
|
probably null |
Het |
Adam7 |
T |
C |
14: 68,748,792 (GRCm39) |
Q485R |
probably benign |
Het |
Adcy4 |
T |
G |
14: 56,006,627 (GRCm39) |
T1069P |
probably benign |
Het |
Arsj |
T |
C |
3: 126,232,337 (GRCm39) |
L361P |
probably damaging |
Het |
Birc2 |
A |
C |
9: 7,826,939 (GRCm39) |
L349R |
probably damaging |
Het |
C1qa |
T |
C |
4: 136,623,727 (GRCm39) |
Y159C |
probably damaging |
Het |
Cdh13 |
A |
G |
8: 119,963,703 (GRCm39) |
K428E |
probably damaging |
Het |
Cenpe |
T |
C |
3: 134,953,235 (GRCm39) |
M1563T |
probably benign |
Het |
Col10a1 |
T |
C |
10: 34,271,696 (GRCm39) |
V556A |
probably benign |
Het |
Creg2 |
G |
A |
1: 39,662,338 (GRCm39) |
L265F |
probably damaging |
Het |
Cyp1a2 |
T |
A |
9: 57,589,433 (GRCm39) |
D127V |
probably damaging |
Het |
Cyp3a44 |
A |
T |
5: 145,740,480 (GRCm39) |
Y53* |
probably null |
Het |
Cyth1 |
C |
T |
11: 118,073,634 (GRCm39) |
R233Q |
probably damaging |
Het |
Dnmbp |
G |
A |
19: 43,890,346 (GRCm39) |
H474Y |
possibly damaging |
Het |
Dvl1 |
G |
A |
4: 155,932,273 (GRCm39) |
V28I |
possibly damaging |
Het |
Ercc2 |
G |
A |
7: 19,120,717 (GRCm39) |
R206H |
possibly damaging |
Het |
Evx2 |
T |
A |
2: 74,486,360 (GRCm39) |
H343L |
probably damaging |
Het |
Fcrl2 |
T |
A |
3: 87,164,648 (GRCm39) |
I293F |
probably benign |
Het |
Gcnt4 |
A |
G |
13: 97,082,974 (GRCm39) |
E90G |
probably damaging |
Het |
Gid8 |
T |
G |
2: 180,358,751 (GRCm39) |
C139G |
probably benign |
Het |
Gm11938 |
C |
A |
11: 99,493,933 (GRCm39) |
C54F |
probably damaging |
Het |
Gm3336 |
G |
A |
8: 71,174,509 (GRCm39) |
V158I |
probably benign |
Het |
Gucy1b1 |
T |
C |
3: 81,968,327 (GRCm39) |
N60D |
probably benign |
Het |
Hdac7 |
T |
C |
15: 97,691,944 (GRCm39) |
K810E |
probably benign |
Het |
Hsp90ab1 |
A |
G |
17: 45,880,629 (GRCm39) |
F361L |
possibly damaging |
Het |
Igf2bp3 |
A |
T |
6: 49,085,858 (GRCm39) |
|
probably null |
Het |
Inpp4b |
T |
A |
8: 82,775,118 (GRCm39) |
I772N |
probably damaging |
Het |
Iqca1 |
A |
G |
1: 90,017,238 (GRCm39) |
L390P |
possibly damaging |
Het |
Itgb2 |
C |
T |
10: 77,396,082 (GRCm39) |
R586W |
probably benign |
Het |
Itih1 |
A |
G |
14: 30,655,432 (GRCm39) |
S588P |
possibly damaging |
Het |
Iyd |
T |
A |
10: 3,497,166 (GRCm39) |
|
probably null |
Het |
Kl |
A |
G |
5: 150,912,425 (GRCm39) |
K725E |
probably benign |
Het |
Layn |
T |
A |
9: 50,968,697 (GRCm39) |
M349L |
probably benign |
Het |
Map3k5 |
T |
C |
10: 19,900,683 (GRCm39) |
Y286H |
probably damaging |
Het |
Med4 |
C |
T |
14: 73,755,472 (GRCm39) |
|
probably benign |
Het |
Mfn1 |
T |
A |
3: 32,588,400 (GRCm39) |
N42K |
possibly damaging |
Het |
Mindy2 |
T |
C |
9: 70,563,874 (GRCm39) |
D152G |
probably benign |
Het |
Mrc2 |
A |
G |
11: 105,238,682 (GRCm39) |
|
probably null |
Het |
Mrpl11 |
C |
A |
19: 5,012,497 (GRCm39) |
A26E |
probably damaging |
Het |
Msh6 |
G |
A |
17: 88,293,568 (GRCm39) |
W774* |
probably null |
Het |
Mtch1 |
A |
T |
17: 29,561,841 (GRCm39) |
V121E |
probably damaging |
Het |
Mtg2 |
G |
T |
2: 179,725,923 (GRCm39) |
E178* |
probably null |
Het |
Nbas |
A |
T |
12: 13,491,510 (GRCm39) |
N1461Y |
probably damaging |
Het |
Ndfip2 |
A |
G |
14: 105,525,204 (GRCm39) |
T65A |
probably benign |
Het |
Ninl |
G |
T |
2: 150,786,503 (GRCm39) |
Q1146K |
probably damaging |
Het |
Notch1 |
T |
C |
2: 26,350,873 (GRCm39) |
D2089G |
possibly damaging |
Het |
Notch3 |
C |
T |
17: 32,366,818 (GRCm39) |
V906M |
probably damaging |
Het |
Or51l14 |
A |
G |
7: 103,101,371 (GRCm39) |
I276V |
probably benign |
Het |
Or6b6 |
A |
G |
7: 106,570,775 (GRCm39) |
Y259H |
probably damaging |
Het |
Osmr |
A |
T |
15: 6,873,891 (GRCm39) |
Y169N |
probably benign |
Het |
Ovgp1 |
T |
C |
3: 105,885,033 (GRCm39) |
V124A |
possibly damaging |
Het |
P2rx1 |
T |
C |
11: 72,904,939 (GRCm39) |
M369T |
probably benign |
Het |
Pde4dip |
T |
C |
3: 97,631,534 (GRCm39) |
Q1125R |
probably damaging |
Het |
Podn |
A |
T |
4: 107,878,892 (GRCm39) |
V180E |
probably damaging |
Het |
Pold1 |
A |
T |
7: 44,188,542 (GRCm39) |
V475E |
probably damaging |
Het |
Polg |
A |
G |
7: 79,111,468 (GRCm39) |
I261T |
possibly damaging |
Het |
Satb1 |
G |
T |
17: 52,047,438 (GRCm39) |
Q595K |
probably benign |
Het |
Scaf8 |
T |
A |
17: 3,214,407 (GRCm39) |
|
probably null |
Het |
Semp2l1 |
T |
A |
1: 32,585,128 (GRCm39) |
M261L |
probably benign |
Het |
Serpinb3a |
C |
T |
1: 106,975,202 (GRCm39) |
|
probably null |
Het |
Slc22a26 |
T |
C |
19: 7,779,480 (GRCm39) |
D112G |
probably damaging |
Het |
Slc25a23 |
A |
G |
17: 57,352,562 (GRCm39) |
F441L |
probably benign |
Het |
Slc25a53 |
T |
C |
X: 135,884,216 (GRCm39) |
T42A |
probably damaging |
Het |
Slc6a15 |
T |
C |
10: 103,229,269 (GRCm39) |
Y103H |
probably damaging |
Het |
Slx4 |
A |
G |
16: 3,804,223 (GRCm39) |
S864P |
probably benign |
Het |
Snap91 |
T |
C |
9: 86,707,130 (GRCm39) |
E220G |
probably damaging |
Het |
Spam1 |
T |
C |
6: 24,796,267 (GRCm39) |
F73L |
probably damaging |
Het |
Sphkap |
C |
T |
1: 83,255,710 (GRCm39) |
V393M |
probably benign |
Het |
Spred2 |
T |
C |
11: 19,971,241 (GRCm39) |
Y370H |
probably damaging |
Het |
Sqle |
T |
C |
15: 59,195,578 (GRCm39) |
|
probably null |
Het |
Srrm2 |
A |
G |
17: 24,037,237 (GRCm39) |
T1390A |
probably benign |
Het |
Tas1r2 |
A |
G |
4: 139,396,352 (GRCm39) |
R564G |
possibly damaging |
Het |
Tbl2 |
G |
T |
5: 135,185,374 (GRCm39) |
|
probably null |
Het |
Tcof1 |
T |
C |
18: 60,964,901 (GRCm39) |
D606G |
possibly damaging |
Het |
Tdpoz3 |
T |
A |
3: 93,734,087 (GRCm39) |
L254H |
probably damaging |
Het |
Ttc22 |
A |
G |
4: 106,496,237 (GRCm39) |
D429G |
probably benign |
Het |
Ube2o |
C |
A |
11: 116,471,972 (GRCm39) |
G90C |
probably damaging |
Het |
Usp34 |
T |
A |
11: 23,332,602 (GRCm39) |
F1110I |
probably damaging |
Het |
Vmn2r82 |
T |
C |
10: 79,214,722 (GRCm39) |
L235P |
probably damaging |
Het |
Vps35 |
A |
G |
8: 86,013,129 (GRCm39) |
V116A |
probably benign |
Het |
Wdfy3 |
A |
G |
5: 102,046,291 (GRCm39) |
|
probably null |
Het |
Zeb2 |
T |
C |
2: 44,878,821 (GRCm39) |
K1138E |
probably benign |
Het |
Zfp513 |
G |
A |
5: 31,357,866 (GRCm39) |
T169I |
probably benign |
Het |
Zfp629 |
T |
C |
7: 127,211,551 (GRCm39) |
D86G |
probably benign |
Het |
|
Other mutations in Trpm1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00093:Trpm1
|
APN |
7 |
63,893,198 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00465:Trpm1
|
APN |
7 |
63,897,215 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL01118:Trpm1
|
APN |
7 |
63,885,572 (GRCm39) |
missense |
probably benign |
0.24 |
IGL01148:Trpm1
|
APN |
7 |
63,893,312 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01303:Trpm1
|
APN |
7 |
63,860,578 (GRCm39) |
critical splice acceptor site |
probably benign |
0.00 |
IGL01432:Trpm1
|
APN |
7 |
63,884,767 (GRCm39) |
missense |
probably benign |
0.18 |
IGL01433:Trpm1
|
APN |
7 |
63,854,276 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01506:Trpm1
|
APN |
7 |
63,893,329 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01626:Trpm1
|
APN |
7 |
63,918,637 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01640:Trpm1
|
APN |
7 |
63,876,645 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01899:Trpm1
|
APN |
7 |
63,884,742 (GRCm39) |
missense |
probably benign |
0.24 |
IGL01959:Trpm1
|
APN |
7 |
63,858,723 (GRCm39) |
missense |
possibly damaging |
0.81 |
IGL02210:Trpm1
|
APN |
7 |
63,860,613 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02268:Trpm1
|
APN |
7 |
63,867,362 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02331:Trpm1
|
APN |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
IGL02334:Trpm1
|
APN |
7 |
63,895,690 (GRCm39) |
critical splice acceptor site |
probably null |
|
IGL02407:Trpm1
|
APN |
7 |
63,868,869 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02425:Trpm1
|
APN |
7 |
63,890,175 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02485:Trpm1
|
APN |
7 |
63,918,862 (GRCm39) |
missense |
possibly damaging |
0.52 |
IGL02635:Trpm1
|
APN |
7 |
63,848,972 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02640:Trpm1
|
APN |
7 |
63,868,881 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02827:Trpm1
|
APN |
7 |
63,868,908 (GRCm39) |
missense |
probably null |
1.00 |
PIT4458001:Trpm1
|
UTSW |
7 |
63,918,309 (GRCm39) |
missense |
possibly damaging |
0.94 |
PIT4544001:Trpm1
|
UTSW |
7 |
63,848,998 (GRCm39) |
intron |
probably benign |
|
R0012:Trpm1
|
UTSW |
7 |
63,918,339 (GRCm39) |
missense |
possibly damaging |
0.88 |
R0014:Trpm1
|
UTSW |
7 |
63,897,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R0056:Trpm1
|
UTSW |
7 |
63,893,334 (GRCm39) |
missense |
probably damaging |
1.00 |
R0445:Trpm1
|
UTSW |
7 |
63,894,590 (GRCm39) |
unclassified |
probably benign |
|
R0463:Trpm1
|
UTSW |
7 |
63,870,002 (GRCm39) |
missense |
probably benign |
0.05 |
R0469:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
R0510:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
R1301:Trpm1
|
UTSW |
7 |
63,852,801 (GRCm39) |
splice site |
probably null |
|
R1397:Trpm1
|
UTSW |
7 |
63,867,406 (GRCm39) |
missense |
probably damaging |
1.00 |
R1588:Trpm1
|
UTSW |
7 |
63,873,565 (GRCm39) |
missense |
possibly damaging |
0.93 |
R1618:Trpm1
|
UTSW |
7 |
63,890,283 (GRCm39) |
missense |
probably damaging |
1.00 |
R1724:Trpm1
|
UTSW |
7 |
63,885,569 (GRCm39) |
nonsense |
probably null |
|
R1827:Trpm1
|
UTSW |
7 |
63,884,755 (GRCm39) |
missense |
probably damaging |
1.00 |
R1829:Trpm1
|
UTSW |
7 |
63,876,530 (GRCm39) |
missense |
probably damaging |
1.00 |
R1835:Trpm1
|
UTSW |
7 |
63,880,016 (GRCm39) |
missense |
probably damaging |
1.00 |
R1864:Trpm1
|
UTSW |
7 |
63,917,764 (GRCm39) |
missense |
probably damaging |
1.00 |
R1895:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R1946:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R1959:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
R1960:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
R1980:Trpm1
|
UTSW |
7 |
63,858,182 (GRCm39) |
missense |
possibly damaging |
0.83 |
R1989:Trpm1
|
UTSW |
7 |
63,858,780 (GRCm39) |
intron |
probably null |
|
R2054:Trpm1
|
UTSW |
7 |
63,890,303 (GRCm39) |
missense |
possibly damaging |
0.69 |
R2251:Trpm1
|
UTSW |
7 |
63,859,724 (GRCm39) |
missense |
probably damaging |
1.00 |
R3051:Trpm1
|
UTSW |
7 |
63,918,849 (GRCm39) |
missense |
probably damaging |
1.00 |
R3148:Trpm1
|
UTSW |
7 |
63,884,760 (GRCm39) |
missense |
probably benign |
0.00 |
R3195:Trpm1
|
UTSW |
7 |
63,849,061 (GRCm39) |
nonsense |
probably null |
|
R3615:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
R3616:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
R3623:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
R3624:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
R3721:Trpm1
|
UTSW |
7 |
63,867,475 (GRCm39) |
intron |
probably benign |
|
R3822:Trpm1
|
UTSW |
7 |
63,867,451 (GRCm39) |
intron |
probably benign |
|
R4441:Trpm1
|
UTSW |
7 |
63,851,666 (GRCm39) |
missense |
probably damaging |
1.00 |
R4490:Trpm1
|
UTSW |
7 |
63,858,660 (GRCm39) |
nonsense |
probably null |
|
R4666:Trpm1
|
UTSW |
7 |
63,852,782 (GRCm39) |
missense |
probably damaging |
1.00 |
R4701:Trpm1
|
UTSW |
7 |
63,893,248 (GRCm39) |
missense |
probably damaging |
1.00 |
R4781:Trpm1
|
UTSW |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
R4811:Trpm1
|
UTSW |
7 |
63,858,054 (GRCm39) |
missense |
probably damaging |
1.00 |
R5017:Trpm1
|
UTSW |
7 |
63,894,580 (GRCm39) |
unclassified |
probably benign |
|
R5030:Trpm1
|
UTSW |
7 |
63,885,579 (GRCm39) |
missense |
probably damaging |
1.00 |
R5195:Trpm1
|
UTSW |
7 |
63,887,441 (GRCm39) |
missense |
possibly damaging |
0.84 |
R5238:Trpm1
|
UTSW |
7 |
63,918,702 (GRCm39) |
missense |
probably damaging |
1.00 |
R5304:Trpm1
|
UTSW |
7 |
63,858,694 (GRCm39) |
missense |
probably benign |
0.00 |
R5575:Trpm1
|
UTSW |
7 |
63,870,018 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5613:Trpm1
|
UTSW |
7 |
63,858,159 (GRCm39) |
missense |
probably damaging |
1.00 |
R5855:Trpm1
|
UTSW |
7 |
63,918,710 (GRCm39) |
nonsense |
probably null |
|
R5947:Trpm1
|
UTSW |
7 |
63,873,547 (GRCm39) |
missense |
probably benign |
0.07 |
R5988:Trpm1
|
UTSW |
7 |
63,876,553 (GRCm39) |
missense |
probably benign |
0.16 |
R6054:Trpm1
|
UTSW |
7 |
63,918,450 (GRCm39) |
missense |
probably benign |
0.00 |
R6088:Trpm1
|
UTSW |
7 |
63,917,724 (GRCm39) |
missense |
probably damaging |
0.98 |
R6259:Trpm1
|
UTSW |
7 |
63,918,226 (GRCm39) |
missense |
possibly damaging |
0.47 |
R6379:Trpm1
|
UTSW |
7 |
63,848,942 (GRCm39) |
missense |
probably benign |
0.00 |
R6380:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.24 |
R6429:Trpm1
|
UTSW |
7 |
63,918,252 (GRCm39) |
missense |
probably benign |
0.00 |
R6600:Trpm1
|
UTSW |
7 |
63,803,781 (GRCm39) |
start codon destroyed |
probably null |
0.56 |
R6622:Trpm1
|
UTSW |
7 |
63,890,343 (GRCm39) |
missense |
probably damaging |
0.96 |
R6939:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.03 |
R6944:Trpm1
|
UTSW |
7 |
63,893,181 (GRCm39) |
missense |
probably damaging |
1.00 |
R7025:Trpm1
|
UTSW |
7 |
63,876,462 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7112:Trpm1
|
UTSW |
7 |
63,885,593 (GRCm39) |
missense |
probably damaging |
0.97 |
R7168:Trpm1
|
UTSW |
7 |
63,918,445 (GRCm39) |
missense |
probably benign |
0.01 |
R7219:Trpm1
|
UTSW |
7 |
63,854,333 (GRCm39) |
missense |
possibly damaging |
0.68 |
R7224:Trpm1
|
UTSW |
7 |
63,868,854 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7285:Trpm1
|
UTSW |
7 |
63,859,729 (GRCm39) |
nonsense |
probably null |
|
R7367:Trpm1
|
UTSW |
7 |
63,918,549 (GRCm39) |
missense |
probably benign |
0.06 |
R7449:Trpm1
|
UTSW |
7 |
63,858,723 (GRCm39) |
missense |
probably benign |
0.14 |
R7466:Trpm1
|
UTSW |
7 |
63,890,330 (GRCm39) |
missense |
probably damaging |
0.99 |
R7498:Trpm1
|
UTSW |
7 |
63,858,657 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7581:Trpm1
|
UTSW |
7 |
63,854,303 (GRCm39) |
missense |
probably benign |
0.00 |
R7776:Trpm1
|
UTSW |
7 |
63,897,939 (GRCm39) |
missense |
probably benign |
0.04 |
R8062:Trpm1
|
UTSW |
7 |
63,851,689 (GRCm39) |
missense |
probably benign |
0.18 |
R8069:Trpm1
|
UTSW |
7 |
63,858,718 (GRCm39) |
missense |
possibly damaging |
0.55 |
R8157:Trpm1
|
UTSW |
7 |
63,849,017 (GRCm39) |
missense |
probably damaging |
1.00 |
R8219:Trpm1
|
UTSW |
7 |
63,851,699 (GRCm39) |
missense |
probably benign |
0.35 |
R8258:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
R8259:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
R8320:Trpm1
|
UTSW |
7 |
63,918,541 (GRCm39) |
missense |
possibly damaging |
0.56 |
R8536:Trpm1
|
UTSW |
7 |
63,897,155 (GRCm39) |
missense |
probably damaging |
1.00 |
R8544:Trpm1
|
UTSW |
7 |
63,874,356 (GRCm39) |
splice site |
probably null |
|
R8813:Trpm1
|
UTSW |
7 |
63,851,756 (GRCm39) |
missense |
possibly damaging |
0.68 |
R8912:Trpm1
|
UTSW |
7 |
63,918,628 (GRCm39) |
missense |
probably benign |
0.06 |
R8954:Trpm1
|
UTSW |
7 |
63,858,089 (GRCm39) |
missense |
probably damaging |
0.98 |
R9139:Trpm1
|
UTSW |
7 |
63,848,943 (GRCm39) |
missense |
probably benign |
0.00 |
R9205:Trpm1
|
UTSW |
7 |
63,890,319 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9258:Trpm1
|
UTSW |
7 |
63,884,713 (GRCm39) |
missense |
probably benign |
0.01 |
R9283:Trpm1
|
UTSW |
7 |
63,873,623 (GRCm39) |
missense |
probably benign |
0.18 |
R9394:Trpm1
|
UTSW |
7 |
63,918,480 (GRCm39) |
missense |
probably benign |
0.00 |
R9430:Trpm1
|
UTSW |
7 |
63,873,446 (GRCm39) |
missense |
probably benign |
0.38 |
R9537:Trpm1
|
UTSW |
7 |
63,803,616 (GRCm39) |
unclassified |
probably benign |
|
R9616:Trpm1
|
UTSW |
7 |
63,858,132 (GRCm39) |
missense |
probably damaging |
0.99 |
R9774:Trpm1
|
UTSW |
7 |
63,898,041 (GRCm39) |
missense |
possibly damaging |
0.90 |
X0026:Trpm1
|
UTSW |
7 |
63,918,658 (GRCm39) |
missense |
probably benign |
0.05 |
Z1176:Trpm1
|
UTSW |
7 |
63,854,342 (GRCm39) |
critical splice donor site |
probably null |
|
Z1176:Trpm1
|
UTSW |
7 |
63,852,879 (GRCm39) |
critical splice donor site |
probably null |
|
Z1177:Trpm1
|
UTSW |
7 |
63,867,439 (GRCm39) |
missense |
unknown |
|
|
Predicted Primers |
PCR Primer
(F):5'- CAGGATGTGAGCTGCTTTGC -3'
(R):5'- GCCCCTGTTAGCAAGCTTTC -3'
Sequencing Primer
(F):5'- TCCACTACGATGAGTTAAAACAAGTC -3'
(R):5'- CCCTGTTAGCAAGCTTTCTAAATGG -3'
|
Posted On |
2014-10-01 |