Mutagenetix > Incidental Mutation

Incidental Mutation 'R2144:Mst1r'

236648

Institutional Source

Beutler Lab

Gene Symbol

Mst1r

Ensembl Gene

ENSMUSG00000032584

Gene Name

macrophage stimulating 1 receptor (c-met-related tyrosine kinase)

Synonyms

Fv2, Ron, STK, friend virus susceptibility 2, CDw136, Fv-2, PTK8

MMRRC Submission

040147-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.340) question?

Stock #

R2144 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

107784072-107797582 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 107790367 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 660 (V660A)

Ref Sequence

ENSEMBL: ENSMUSP00000035203 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000035203] [ENSMUST00000195617]

AlphaFold

Q62190

Predicted Effect

probably benign
Transcript: ENSMUST00000035203
AA Change: V660A

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000035203
Gene: ENSMUSG00000032584
AA Change: V660A

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
Sema	57	510	9.03e-116	SMART
PSI	528	570	8.72e-4	SMART
IPT	570	684	1.63e-18	SMART
IPT	685	769	4.03e-23	SMART
IPT	771	873	8.41e-12	SMART
IPT	878	972	5.36e0	SMART
TyrKc	1059	1318	8.2e-134	SMART
low complexity region	1349	1360	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000194527

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000195113

Predicted Effect

probably benign
Transcript: ENSMUST00000195617

SMART Domains

Protein: ENSMUSP00000142201
Gene: ENSMUSG00000032584

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
Sema	57	442	3.5e-63	SMART

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.4%
20x: 95.1%

Validation Efficiency

MGI Phenotype

FUNCTION: This gene encodes a precursor protein that is proteolytically cleaved to yield an alpha chain and a beta chain which form a membrane-spanning heterodimer. The encoded protein belongs to a family of cell-surface receptor tyrosine kinases involved in signaling from the cell surface to the intracellular environment. The binding of the encoded protein to its ligand, macrophage-stimulating protein, mediates several biological activities including wound healing, tumor immunity, macrophage activation and hematopoiesis as well as cell growth, motility, survival and adhesion. The protein encoded by this gene also functions in early development and the macrophage-mediated inflammatory response. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2013]
PHENOTYPE: This locus controls susceptibility to splenomegaly or spleen focus formation induced by inoculation with Friend leukemia virus. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 117 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930553M12Rik	T	A	4: 88,786,412 (GRCm39)	T69S	unknown	Het
4930553M12Rik	G	A	4: 88,786,411 (GRCm39)	T69I	unknown	Het
Acsl6	A	T	11: 54,232,604 (GRCm39)	Q485L	probably damaging	Het
Adam5	C	A	8: 25,305,496 (GRCm39)	V81F	probably benign	Het
Aoc1l1	A	G	6: 48,952,225 (GRCm39)	H50R	probably benign	Het
Bag2	A	G	1: 33,785,912 (GRCm39)	S137P	possibly damaging	Het
Birc6	A	T	17: 74,967,408 (GRCm39)	Q4103L	possibly damaging	Het
Camta2	A	G	11: 70,562,401 (GRCm39)	F999L	probably benign	Het
Cap2	A	T	13: 46,713,978 (GRCm39)		probably null	Het
Ccnk	T	A	12: 108,155,349 (GRCm39)	L102Q	probably null	Het
Cd52	T	C	4: 133,821,048 (GRCm39)		probably benign	Het
Cdc123	A	T	2: 5,815,617 (GRCm39)	I160K	probably benign	Het
Cep85l	T	C	10: 53,234,222 (GRCm39)	N52S	probably benign	Het
Cntnap5a	C	T	1: 116,029,440 (GRCm39)	T298I	probably benign	Het
Cpsf4	G	T	5: 145,115,572 (GRCm39)	S192I	probably benign	Het
Cpxm1	A	G	2: 130,239,330 (GRCm39)	S33P	probably benign	Het
Cyp2a12	A	T	7: 26,734,194 (GRCm39)	T376S	possibly damaging	Het
Cyp3a16	A	G	5: 145,392,894 (GRCm39)	F137S	probably damaging	Het
Des	A	G	1: 75,343,448 (GRCm39)	T444A	probably benign	Het
Dgcr8	C	T	16: 18,102,120 (GRCm39)	G54D	probably damaging	Het
Dmac2l	A	G	12: 69,787,828 (GRCm39)	Q88R	probably damaging	Het
Dsc3	A	G	18: 20,113,743 (GRCm39)	F393S	possibly damaging	Het
Dstyk	T	A	1: 132,391,113 (GRCm39)	M838K	probably damaging	Het
Dvl1	G	A	4: 155,932,273 (GRCm39)	V28I	possibly damaging	Het
Eml5	A	C	12: 98,776,864 (GRCm39)	F1417C	probably damaging	Het
Ep400	A	T	5: 110,851,384 (GRCm39)	M1366K	unknown	Het
Epg5	G	T	18: 77,997,412 (GRCm39)	C425F	possibly damaging	Het
Epha3	C	G	16: 63,593,680 (GRCm39)	R136P	possibly damaging	Het
Extl1	C	A	4: 134,098,355 (GRCm39)	E225D	probably benign	Het
Fam186b	A	G	15: 99,178,538 (GRCm39)	Y263H	probably benign	Het
Fbn2	A	G	18: 58,186,065 (GRCm39)	V1761A	possibly damaging	Het
Fer1l6	T	A	15: 58,499,383 (GRCm39)	M1251K	probably benign	Het
Gart	A	T	16: 91,426,969 (GRCm39)	I555N	probably damaging	Het
Gm11596	A	T	11: 99,683,789 (GRCm39)	C110*	probably null	Het
Gnptab	C	T	10: 88,264,368 (GRCm39)	S262L	possibly damaging	Het
Gpr21	T	C	2: 37,408,243 (GRCm39)	V263A	probably benign	Het
Gxylt1	T	C	15: 93,152,361 (GRCm39)	I224V	probably benign	Het
H2-Aa	A	G	17: 34,502,801 (GRCm39)	S122P	probably damaging	Het
Hsph1	A	C	5: 149,553,802 (GRCm39)		probably null	Het
Hunk	G	A	16: 90,229,420 (GRCm39)	D94N	probably damaging	Het
Ikbke	C	A	1: 131,201,211 (GRCm39)	V176L	probably damaging	Het
Inpp5k	A	T	11: 75,538,017 (GRCm39)		probably null	Het
Ints10	A	G	8: 69,249,457 (GRCm39)	T96A	probably damaging	Het
Kansl2	A	T	15: 98,424,512 (GRCm39)	V306E	probably benign	Het
Kif20a	A	G	18: 34,758,657 (GRCm39)	D42G	possibly damaging	Het
Klhl7	A	T	5: 24,305,861 (GRCm39)	M37L	probably benign	Het
Krtap1-5	T	C	11: 99,471,644 (GRCm39)	I50V	probably benign	Het
Ktn1	A	G	14: 47,952,109 (GRCm39)	E983G	probably damaging	Het
Lrrk1	G	A	7: 65,945,911 (GRCm39)	S566L	probably damaging	Het
M6pr	A	G	6: 122,292,326 (GRCm39)	M174V	probably benign	Het
Man2a2	A	G	7: 80,013,264 (GRCm39)	S510P	probably damaging	Het
Mmrn1	G	A	6: 60,922,059 (GRCm39)	S172N	possibly damaging	Het
Mpv17	A	G	5: 31,311,533 (GRCm39)		probably null	Het
Mrgpra9	T	C	7: 46,885,211 (GRCm39)	E152G	probably benign	Het
Myof	A	G	19: 37,969,669 (GRCm39)		probably null	Het
Myrf	G	A	19: 10,206,038 (GRCm39)	P126L	probably benign	Het
Nckap1l	C	T	15: 103,384,103 (GRCm39)	A567V	probably damaging	Het
Nphs1	A	G	7: 30,160,395 (GRCm39)	E169G	probably benign	Het
Npy1r	T	A	8: 67,157,836 (GRCm39)	V382D	probably benign	Het
Nrl	A	T	14: 55,758,307 (GRCm39)	M140K	possibly damaging	Het
Odad2	C	T	18: 7,127,229 (GRCm39)	E995K	probably damaging	Het
Or14c39	T	A	7: 86,344,488 (GRCm39)	F275I	probably damaging	Het
Or2ag1b	A	T	7: 106,288,164 (GRCm39)	M258K	probably damaging	Het
Or4f56	A	G	2: 111,703,768 (GRCm39)	I144T	probably damaging	Het
Or5ac17	C	T	16: 59,036,389 (GRCm39)	V196M	probably benign	Het
Or8d2	C	T	9: 38,759,635 (GRCm39)	T75I	probably damaging	Het
Orc5	T	A	5: 22,752,925 (GRCm39)	L36F	possibly damaging	Het
Osbpl1a	A	T	18: 13,004,230 (GRCm39)	S396T	probably benign	Het
Pappa	T	A	4: 65,099,186 (GRCm39)	Y568*	probably null	Het
Pask	C	T	1: 93,249,019 (GRCm39)	A794T	probably benign	Het
Pclo	C	T	5: 14,908,766 (GRCm39)	L5025F	unknown	Het
Pde3a	T	C	6: 141,435,837 (GRCm39)	V924A	probably benign	Het
Pdpr	A	G	8: 111,844,668 (GRCm39)	N355S	probably damaging	Het
Pepd	A	T	7: 34,620,843 (GRCm39)	K36M	probably benign	Het
Pet100	T	G	8: 3,672,355 (GRCm39)	L14R	probably damaging	Het
Pfkfb2	T	C	1: 130,626,460 (GRCm39)	T438A	probably benign	Het
Pik3r6	T	A	11: 68,434,437 (GRCm39)	L546*	probably null	Het
Pira2	A	T	7: 3,847,344 (GRCm39)	L115Q	probably damaging	Het
Plxdc1	T	C	11: 97,824,838 (GRCm39)	Y339C	probably damaging	Het
Primpol	A	T	8: 47,039,378 (GRCm39)	M414K	probably damaging	Het
Prol1	A	T	5: 88,476,254 (GRCm39)	T215S	unknown	Het
Prss22	A	G	17: 24,213,656 (GRCm39)	Y212H	probably damaging	Het
Ralgapa2	C	A	2: 146,230,524 (GRCm39)	V1014L	probably damaging	Het
Rap1gap2	G	A	11: 74,316,802 (GRCm39)	T245M	probably damaging	Het
Rbm26	T	A	14: 105,352,638 (GRCm39)	R1009*	probably null	Het
Rbm42	A	G	7: 30,340,535 (GRCm39)	*450Q	probably null	Het
Rere	T	C	4: 150,701,388 (GRCm39)	V1256A	probably damaging	Het
Rmi1	G	T	13: 58,555,797 (GRCm39)	L15F	probably damaging	Het
Rnf213	T	C	11: 119,334,516 (GRCm39)	S3242P	probably damaging	Het
Rtel1	T	A	2: 180,965,499 (GRCm39)	V167E	probably damaging	Het
Scgb1b2	G	T	7: 30,991,188 (GRCm39)		probably benign	Het
Sin3b	T	C	8: 73,457,893 (GRCm39)	L203P	probably damaging	Het
Skint6	T	C	4: 113,093,457 (GRCm39)	S229G	possibly damaging	Het
Slco1a4	T	C	6: 141,755,104 (GRCm39)	Y566C	probably damaging	Het
Smgc	T	G	15: 91,728,624 (GRCm39)	D121E	possibly damaging	Het
Sned1	T	A	1: 93,199,406 (GRCm39)	F495L	probably damaging	Het
St7	A	T	6: 17,886,006 (GRCm39)	N52I	possibly damaging	Het
Sycn	C	A	7: 28,240,494 (GRCm39)	Q54K	probably benign	Het
Syngr4	A	G	7: 45,536,464 (GRCm39)	V186A	probably benign	Het
Tars3	G	A	7: 65,305,539 (GRCm39)	M254I	possibly damaging	Het
Tcaf2	A	T	6: 42,619,738 (GRCm39)	H96Q	probably benign	Het
Tcp11l2	T	C	10: 84,449,363 (GRCm39)	Y443H	probably damaging	Het
Tmem200c	A	T	17: 69,149,244 (GRCm39)	Q609L	possibly damaging	Het
Tmx3	G	A	18: 90,535,614 (GRCm39)	G83R	probably damaging	Het
Tpgs2	A	C	18: 25,301,598 (GRCm39)	V23G	possibly damaging	Het
Trhr	T	C	15: 44,060,579 (GRCm39)	V33A	probably benign	Het
Trim66	A	T	7: 109,074,320 (GRCm39)	I647N	probably damaging	Het
Trnt1	A	G	6: 106,755,000 (GRCm39)	K244E	probably damaging	Het
Tsfm	G	A	10: 126,864,314 (GRCm39)	Q134*	probably null	Het
Ttll9	A	G	2: 152,844,927 (GRCm39)	T432A	probably benign	Het
Vmn2r78	C	T	7: 86,603,690 (GRCm39)	L623F	probably damaging	Het
Wdr55	A	G	18: 36,895,419 (GRCm39)	N132S	possibly damaging	Het
Wipf2	A	T	11: 98,787,040 (GRCm39)	R356S	possibly damaging	Het
Wnk1	A	G	6: 119,925,949 (GRCm39)		probably benign	Het
Zfp260	A	G	7: 29,804,765 (GRCm39)	K222E	probably damaging	Het
Zfp300	A	G	X: 20,948,190 (GRCm39)	S525P	possibly damaging	Het
Zfp592	A	G	7: 80,687,950 (GRCm39)	T959A	probably benign	Het

Other mutations in Mst1r

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00429:Mst1r	APN	9	107,790,449 (GRCm39)	splice site	probably benign
IGL01327:Mst1r	APN	9	107,785,043 (GRCm39)	missense	probably benign	0.03
IGL01572:Mst1r	APN	9	107,788,791 (GRCm39)	missense	probably damaging	1.00
IGL01968:Mst1r	APN	9	107,794,005 (GRCm39)	splice site	probably null
IGL01983:Mst1r	APN	9	107,794,475 (GRCm39)	missense	probably damaging	0.99
IGL02096:Mst1r	APN	9	107,794,478 (GRCm39)	missense	probably damaging	0.97
IGL02203:Mst1r	APN	9	107,785,068 (GRCm39)	missense	probably damaging	1.00
IGL02203:Mst1r	APN	9	107,790,348 (GRCm39)	missense	possibly damaging	0.61
IGL02332:Mst1r	APN	9	107,785,025 (GRCm39)	nonsense	probably null
IGL02402:Mst1r	APN	9	107,794,026 (GRCm39)	missense	probably damaging	0.99
IGL02404:Mst1r	APN	9	107,790,266 (GRCm39)	splice site	probably benign
IGL02942:Mst1r	APN	9	107,790,352 (GRCm39)	missense	possibly damaging	0.89
IGL02951:Mst1r	APN	9	107,785,403 (GRCm39)	missense	possibly damaging	0.88
IGL02975:Mst1r	APN	9	107,790,379 (GRCm39)	missense	probably benign	0.20
IGL03005:Mst1r	APN	9	107,791,748 (GRCm39)	nonsense	probably null
IGL03304:Mst1r	APN	9	107,785,137 (GRCm39)	missense	probably damaging	1.00
R0386:Mst1r	UTSW	9	107,794,003 (GRCm39)	splice site	probably null
R0833:Mst1r	UTSW	9	107,791,975 (GRCm39)	missense	probably benign	0.00
R0833:Mst1r	UTSW	9	107,790,366 (GRCm39)	missense	probably benign
R1139:Mst1r	UTSW	9	107,797,168 (GRCm39)	missense	possibly damaging	0.93
R1371:Mst1r	UTSW	9	107,794,424 (GRCm39)	missense	probably damaging	1.00
R1477:Mst1r	UTSW	9	107,785,523 (GRCm39)	missense	probably benign
R1479:Mst1r	UTSW	9	107,790,544 (GRCm39)	splice site	probably benign
R1541:Mst1r	UTSW	9	107,794,562 (GRCm39)	missense	probably damaging	0.99
R1698:Mst1r	UTSW	9	107,797,179 (GRCm39)	missense	probably benign	0.06
R1891:Mst1r	UTSW	9	107,790,661 (GRCm39)	missense	probably damaging	1.00
R1971:Mst1r	UTSW	9	107,790,411 (GRCm39)	missense	probably benign	0.06
R1974:Mst1r	UTSW	9	107,793,132 (GRCm39)	critical splice donor site	probably null
R1974:Mst1r	UTSW	9	107,791,962 (GRCm39)	missense	probably damaging	1.00
R2221:Mst1r	UTSW	9	107,785,547 (GRCm39)	missense	probably damaging	1.00
R2356:Mst1r	UTSW	9	107,795,069 (GRCm39)	missense	probably damaging	1.00
R3913:Mst1r	UTSW	9	107,791,945 (GRCm39)	missense	probably benign
R4768:Mst1r	UTSW	9	107,788,849 (GRCm39)	missense	probably damaging	1.00
R4793:Mst1r	UTSW	9	107,797,124 (GRCm39)	missense	probably damaging	0.96
R5141:Mst1r	UTSW	9	107,789,440 (GRCm39)	missense	probably damaging	0.99
R5191:Mst1r	UTSW	9	107,788,750 (GRCm39)	missense	probably damaging	0.98
R5238:Mst1r	UTSW	9	107,784,773 (GRCm39)	missense	probably damaging	1.00
R6024:Mst1r	UTSW	9	107,785,350 (GRCm39)	missense	probably benign	0.00
R6220:Mst1r	UTSW	9	107,784,547 (GRCm39)	missense	probably benign	0.11
R6256:Mst1r	UTSW	9	107,794,465 (GRCm39)	missense	probably damaging	1.00
R6361:Mst1r	UTSW	9	107,793,052 (GRCm39)	missense	probably benign
R6522:Mst1r	UTSW	9	107,790,438 (GRCm39)	missense	probably benign	0.00
R6559:Mst1r	UTSW	9	107,785,470 (GRCm39)	missense	possibly damaging	0.91
R6863:Mst1r	UTSW	9	107,797,225 (GRCm39)	missense	probably benign
R6868:Mst1r	UTSW	9	107,793,132 (GRCm39)	critical splice donor site	probably null
R6873:Mst1r	UTSW	9	107,788,843 (GRCm39)	missense	possibly damaging	0.90
R6978:Mst1r	UTSW	9	107,789,793 (GRCm39)	missense	probably benign	0.23
R7168:Mst1r	UTSW	9	107,785,392 (GRCm39)	missense	probably benign	0.01
R7299:Mst1r	UTSW	9	107,791,989 (GRCm39)	missense	possibly damaging	0.46
R7301:Mst1r	UTSW	9	107,791,989 (GRCm39)	missense	possibly damaging	0.46
R7405:Mst1r	UTSW	9	107,792,321 (GRCm39)	missense	possibly damaging	0.87
R7615:Mst1r	UTSW	9	107,797,211 (GRCm39)	missense	probably benign	0.05
R7684:Mst1r	UTSW	9	107,788,762 (GRCm39)	missense	probably benign	0.01
R7741:Mst1r	UTSW	9	107,784,319 (GRCm39)	start gained	probably benign
R7916:Mst1r	UTSW	9	107,784,777 (GRCm39)	missense	probably damaging	1.00
R7987:Mst1r	UTSW	9	107,789,997 (GRCm39)	splice site	probably null
R8177:Mst1r	UTSW	9	107,784,784 (GRCm39)	missense	probably damaging	1.00
R8356:Mst1r	UTSW	9	107,794,463 (GRCm39)	missense	probably damaging	1.00
R8494:Mst1r	UTSW	9	107,791,718 (GRCm39)	missense	possibly damaging	0.90
R8692:Mst1r	UTSW	9	107,792,050 (GRCm39)	missense	possibly damaging	0.82
R8979:Mst1r	UTSW	9	107,792,478 (GRCm39)	missense	probably damaging	0.98
R9012:Mst1r	UTSW	9	107,791,960 (GRCm39)	missense	probably benign	0.01
X0026:Mst1r	UTSW	9	107,790,402 (GRCm39)	missense	probably damaging	0.97

Predicted Primers

PCR Primer
(F):5'- GGTTAGCCCACTTGATCCTGTC -3'
(R):5'- ATGTGGAAGAGGCTCAGCTG -3'

Sequencing Primer
(F):5'- GAGATGCTCCTCTGAGGTTC -3'
(R):5'- GAGGCTCAGCTGAAACAAACCATTC -3'

Posted On

2014-10-01