Mutagenetix > Incidental Mutation

Incidental Mutation 'R2176:Zswim3'

236857

Institutional Source

Beutler Lab

Gene Symbol

Zswim3

Ensembl Gene

ENSMUSG00000045822

Gene Name

zinc finger SWIM-type containing 3

Synonyms

4921517A06Rik

MMRRC Submission

040178-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.078) question?

Stock #

R2176 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

164647034-164664047 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 164662614 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Alanine to Serine at position 365 (A365S)

Ref Sequence

ENSEMBL: ENSMUSP00000050970 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000017908] [ENSMUST00000052107] [ENSMUST00000132282]

AlphaFold

Q8CFL8

Predicted Effect

probably benign
Transcript: ENSMUST00000017908

SMART Domains

Protein: ENSMUSP00000017908
Gene: ENSMUSG00000017764

Domain	Start	End	E-Value	Type
Pfam:SWIM	342	375	2e-9	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000052107
AA Change: A365S

PolyPhen 2 Score 0.075 (Sensitivity: 0.93; Specificity: 0.85)

SMART Domains

Protein: ENSMUSP00000050970
Gene: ENSMUSG00000045822
AA Change: A365S

Domain	Start	End	E-Value	Type
low complexity region	436	453	N/A	INTRINSIC
low complexity region	474	489	N/A	INTRINSIC
ZnF_PMZ	546	573	2.09e-2	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000132282

Meta Mutation Damage Score

0.1144

Coding Region Coverage

1x: 99.2%
3x: 98.7%
10x: 97.5%
20x: 95.6%

Validation Efficiency

100% (64/64)

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam1a	T	A	5: 121,657,649 (GRCm39)	Y548F	probably benign	Het
Armc9	T	C	1: 86,127,614 (GRCm39)	L83P	probably damaging	Het
BC051665	A	T	13: 60,932,344 (GRCm39)		probably benign	Het
Casp3	A	G	8: 47,082,791 (GRCm39)	N3S	probably damaging	Het
Ccdc174	G	A	6: 91,865,070 (GRCm39)	M109I	probably benign	Het
Ccr6	T	A	17: 8,475,073 (GRCm39)	F93I	probably damaging	Het
Clvs2	T	C	10: 33,471,811 (GRCm39)	S165G	probably damaging	Het
Cntnap5c	T	C	17: 58,320,941 (GRCm39)	V171A	probably benign	Het
Dennd5a	C	A	7: 109,504,327 (GRCm39)		probably null	Het
Dock2	T	A	11: 34,586,044 (GRCm39)	Y546F	probably benign	Het
Fat2	A	G	11: 55,158,401 (GRCm39)		probably null	Het
Focad	T	A	4: 88,197,481 (GRCm39)	Y625N	unknown	Het
Fyb1	A	G	15: 6,609,435 (GRCm39)	K3E	probably damaging	Het
Gm14496	G	A	2: 181,633,130 (GRCm39)	D38N	probably benign	Het
Gm20403	T	C	12: 55,033,155 (GRCm39)	T54A	probably benign	Het
Gm9830	A	G	9: 44,375,556 (GRCm39)		noncoding transcript	Het
Hectd1	A	T	12: 51,792,277 (GRCm39)	S2487R	probably damaging	Het
Il5ra	A	G	6: 106,715,233 (GRCm39)	L175S	probably benign	Het
Inhca	A	G	9: 103,136,566 (GRCm39)		probably benign	Het
Itgav	C	T	2: 83,633,599 (GRCm39)	R983C	probably damaging	Het
Kcna10	T	C	3: 107,102,032 (GRCm39)	V221A	probably damaging	Het
Kif13b	G	A	14: 64,907,120 (GRCm39)	V35I	probably benign	Het
Kif6	G	A	17: 50,062,258 (GRCm39)	E473K	probably damaging	Het
Mfsd14a	T	C	3: 116,426,042 (GRCm39)	T452A	probably benign	Het
Mllt1	A	G	17: 57,204,398 (GRCm39)	S382P	probably benign	Het
Myo15b	T	C	11: 115,757,398 (GRCm39)	W1083R	probably damaging	Het
Nell2	T	C	15: 95,333,038 (GRCm39)	I174V	probably damaging	Het
Noct	G	A	3: 51,157,117 (GRCm39)		probably null	Het
Nvl	A	T	1: 180,962,639 (GRCm39)		probably benign	Het
Ofcc1	T	C	13: 40,250,595 (GRCm39)	S574G	probably benign	Het
Or10a3m	G	A	7: 108,313,339 (GRCm39)	V248I	probably damaging	Het
Or11h4	T	C	14: 50,973,681 (GRCm39)	M313V	probably benign	Het
Or4a75	A	T	2: 89,447,924 (GRCm39)	M204K	possibly damaging	Het
Pip5k1a	A	T	3: 94,972,807 (GRCm39)	S415T	probably damaging	Het
Pkhd1	G	A	1: 20,623,741 (GRCm39)	P785S	probably damaging	Het
Plcg2	A	G	8: 118,339,733 (GRCm39)	Y1048C	probably damaging	Het
Ppp3cb	A	T	14: 20,570,720 (GRCm39)	V337E	probably benign	Het
Prkg2	T	C	5: 99,114,368 (GRCm39)		probably benign	Het
Prl7a2	T	G	13: 27,843,089 (GRCm39)	Y238S	probably benign	Het
Psg28	T	A	7: 18,161,804 (GRCm39)	D233V	probably damaging	Het
Rad50	A	G	11: 53,589,036 (GRCm39)	C221R	probably benign	Het
Rgl3	A	G	9: 21,887,254 (GRCm39)		probably benign	Het
Rgsl1	T	A	1: 153,701,014 (GRCm39)		probably benign	Het
Ror1	C	A	4: 100,299,071 (GRCm39)	R815S	probably damaging	Het
Rrp1b	C	A	17: 32,275,534 (GRCm39)	D360E	probably benign	Het
Ryr3	T	C	2: 112,496,680 (GRCm39)	Q3682R	possibly damaging	Het
Sdr42e1	A	T	8: 118,389,616 (GRCm39)	F342I	possibly damaging	Het
Setd5	A	G	6: 113,128,114 (GRCm39)	R1337G	probably benign	Het
Siglecf	T	C	7: 43,001,140 (GRCm39)	V36A	probably damaging	Het
Slc4a5	G	A	6: 83,239,542 (GRCm39)	G152D	probably damaging	Het
Sptbn4	T	G	7: 27,063,587 (GRCm39)	M2280L	probably benign	Het
Syngr2	T	C	11: 117,703,406 (GRCm39)	I74T	probably damaging	Het
Tm9sf1	T	C	14: 55,878,866 (GRCm39)	I175M	possibly damaging	Het
Tmc3	A	G	7: 83,258,516 (GRCm39)	E502G	probably damaging	Het
Tph1	T	A	7: 46,311,463 (GRCm39)	D88V	possibly damaging	Het
Tpr	A	G	1: 150,295,691 (GRCm39)	K979E	possibly damaging	Het
Usp47	A	G	7: 111,691,934 (GRCm39)	T799A	probably benign	Het
Utf1	A	G	7: 139,523,920 (GRCm39)	E45G	possibly damaging	Het
Vmn1r208	A	T	13: 22,956,772 (GRCm39)	C242S	probably damaging	Het
Wrnip1	T	C	13: 33,004,223 (GRCm39)	I498T	probably damaging	Het
Ypel2	T	A	11: 86,862,699 (GRCm39)	H18L	probably benign	Het
Zan	T	G	5: 137,420,110 (GRCm39)	D2849A	unknown	Het
Zfp647	A	T	15: 76,795,860 (GRCm39)	F267I	probably damaging	Het
Zfp786	G	T	6: 47,797,905 (GRCm39)	H344Q	possibly damaging	Het
Zswim5	T	C	4: 116,830,238 (GRCm39)	W538R	probably damaging	Het

Other mutations in Zswim3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00517:Zswim3	APN	2	164,663,011 (GRCm39)	missense	probably damaging	1.00
IGL01345:Zswim3	APN	2	164,662,057 (GRCm39)	missense	probably damaging	1.00
IGL01608:Zswim3	APN	2	164,663,440 (GRCm39)	missense	probably damaging	1.00
IGL01621:Zswim3	APN	2	164,663,440 (GRCm39)	missense	probably damaging	1.00
IGL01634:Zswim3	APN	2	164,661,922 (GRCm39)	missense	probably damaging	0.99
IGL02165:Zswim3	APN	2	164,663,035 (GRCm39)	missense	possibly damaging	0.94
IGL02173:Zswim3	APN	2	164,662,759 (GRCm39)	missense	probably damaging	1.00
IGL02336:Zswim3	APN	2	164,662,297 (GRCm39)	missense	probably damaging	0.98
IGL02379:Zswim3	APN	2	164,662,602 (GRCm39)	splice site	probably null
R0321:Zswim3	UTSW	2	164,662,279 (GRCm39)	missense	possibly damaging	0.83
R1489:Zswim3	UTSW	2	164,661,901 (GRCm39)	missense	probably benign	0.00
R2126:Zswim3	UTSW	2	164,661,913 (GRCm39)	missense	probably benign	0.31
R2859:Zswim3	UTSW	2	164,662,309 (GRCm39)	missense	probably damaging	1.00
R3853:Zswim3	UTSW	2	164,662,777 (GRCm39)	missense	possibly damaging	0.61
R4434:Zswim3	UTSW	2	164,662,563 (GRCm39)	missense	probably benign	0.00
R4435:Zswim3	UTSW	2	164,662,563 (GRCm39)	missense	probably benign	0.00
R4436:Zswim3	UTSW	2	164,662,563 (GRCm39)	missense	probably benign	0.00
R4438:Zswim3	UTSW	2	164,662,563 (GRCm39)	missense	probably benign	0.00
R4805:Zswim3	UTSW	2	164,662,099 (GRCm39)	missense	possibly damaging	0.52
R5874:Zswim3	UTSW	2	164,662,032 (GRCm39)	missense	probably benign	0.06
R6417:Zswim3	UTSW	2	164,662,653 (GRCm39)	missense	probably damaging	0.97
R6420:Zswim3	UTSW	2	164,662,653 (GRCm39)	missense	probably damaging	0.97
R6722:Zswim3	UTSW	2	164,662,544 (GRCm39)	splice site	probably null
R6786:Zswim3	UTSW	2	164,662,771 (GRCm39)	missense	probably damaging	1.00
R7266:Zswim3	UTSW	2	164,662,402 (GRCm39)	missense	probably benign	0.41
R7467:Zswim3	UTSW	2	164,661,795 (GRCm39)	missense	possibly damaging	0.59
R7487:Zswim3	UTSW	2	164,662,135 (GRCm39)	missense	probably damaging	0.99
R7788:Zswim3	UTSW	2	164,661,699 (GRCm39)	missense	probably damaging	1.00
R8191:Zswim3	UTSW	2	164,662,128 (GRCm39)	missense	probably damaging	1.00
R8308:Zswim3	UTSW	2	164,663,566 (GRCm39)	missense	probably damaging	1.00
R8794:Zswim3	UTSW	2	164,662,687 (GRCm39)	missense	probably damaging	0.98
R9353:Zswim3	UTSW	2	164,662,261 (GRCm39)	missense	probably damaging	1.00
R9527:Zswim3	UTSW	2	164,662,285 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- ACACCACTCGTCTCTTGGAG -3'
(R):5'- CCTTAACTTGGGAGCATTTGTG -3'

Sequencing Primer
(F):5'- CGTCTCTTGGAGAAGAAGTTACACC -3'
(R):5'- CATTTGTGGGCAAGCTCTTCAGAC -3'

Posted On

2014-10-02