Incidental Mutation 'R2233:Zscan25'
ID 240170
Institutional Source Beutler Lab
Gene Symbol Zscan25
Ensembl Gene ENSMUSG00000070420
Gene Name zinc finger and SCAN domain containing 25
Synonyms Zfp498, EG666311
MMRRC Submission 040234-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.156) question?
Stock # R2233 (G1)
Quality Score 225
Status Not validated
Chromosome 5
Chromosomal Location 145280500-145291278 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) A to G at 145283692 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Cysteine at position 99 (Y99C)
Ref Sequence ENSEMBL: ENSMUSP00000142367 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000094116] [ENSMUST00000199563] [ENSMUST00000200246]
AlphaFold B2RX31
Predicted Effect probably damaging
Transcript: ENSMUST00000094116
AA Change: Y99C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000091664
Gene: ENSMUSG00000070420
AA Change: Y99C

DomainStartEndE-ValueType
SCAN 38 150 5.94e-53 SMART
Blast:KRAB 231 288 4e-31 BLAST
ZnF_C2H2 346 368 2.15e-5 SMART
ZnF_C2H2 374 396 5.06e-2 SMART
ZnF_C2H2 402 424 8.34e-3 SMART
ZnF_C2H2 430 452 3.39e-3 SMART
ZnF_C2H2 458 479 1.08e1 SMART
ZnF_C2H2 485 507 4.47e-3 SMART
ZnF_C2H2 513 536 5.59e-4 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000199563
AA Change: Y99C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000143449
Gene: ENSMUSG00000070420
AA Change: Y99C

DomainStartEndE-ValueType
SCAN 38 150 2.1e-54 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000200246
AA Change: Y99C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000142367
Gene: ENSMUSG00000070420
AA Change: Y99C

DomainStartEndE-ValueType
SCAN 38 150 1.9e-55 SMART
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 94.9%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that bears some similarity to zinc finger proteins, which are involved in DNA binding and protein-protein interactions. Multiple alternatively spliced transcript variants have been identified, but the full-length nature for most of them has not been determined. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 63 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam23 A G 1: 63,545,512 I360V probably benign Het
Adarb1 A G 10: 77,317,349 V322A probably damaging Het
Atad2b T G 12: 5,006,745 F867C probably damaging Het
Ccdc24 T C 4: 117,869,916 K79R possibly damaging Het
Cfap44 A G 16: 44,451,525 I1214V probably benign Het
Chrm4 A G 2: 91,928,530 S428G probably benign Het
Chrnb1 A T 11: 69,795,602 I64N probably damaging Het
Crh A T 3: 19,693,932 M182K probably damaging Het
Dazap1 A G 10: 80,277,599 K110E possibly damaging Het
Dhx16 T C 17: 35,887,886 C737R probably damaging Het
Dst A G 1: 34,274,262 E6384G probably damaging Het
Dync1i2 C T 2: 71,249,420 Q419* probably null Het
E2f4 T A 8: 105,298,651 V121E probably damaging Het
Enah G A 1: 181,921,972 P415L probably damaging Het
Fat3 G A 9: 15,998,271 S2145F probably damaging Het
Fezf1 T C 6: 23,246,003 T388A probably damaging Het
Gimap6 T A 6: 48,704,484 H72L possibly damaging Het
Gm11149 A G 9: 49,562,146 probably benign Het
Gm12695 C T 4: 96,724,029 R499Q probably damaging Het
Grhl1 A G 12: 24,608,511 D385G probably damaging Het
Hyou1 C T 9: 44,389,091 T855M probably benign Het
Igf1r T A 7: 68,212,080 N1129K probably damaging Het
Iglon5 T C 7: 43,480,638 E34G probably damaging Het
Kcnab1 T A 3: 65,319,467 V189D probably damaging Het
Kifap3 T A 1: 163,856,065 D438E probably benign Het
Lmo2 T C 2: 103,981,062 Y147H probably damaging Het
Lrrc41 G A 4: 116,096,385 R756Q possibly damaging Het
Lrrc49 A T 9: 60,598,157 F538L possibly damaging Het
Nphp3 G A 9: 104,037,376 R1052H probably benign Het
Nynrin G A 14: 55,872,067 V1544I possibly damaging Het
Obscn T C 11: 59,131,646 R758G possibly damaging Het
Olfr1154 G A 2: 87,903,475 S67F probably damaging Het
Olfr1346 T C 7: 6,474,442 S111P possibly damaging Het
Osbpl6 T C 2: 76,586,769 F577L probably damaging Het
Otc A G X: 10,303,367 Q216R probably benign Het
Ppp1r12a A G 10: 108,198,919 I108M possibly damaging Het
Prl7a1 C A 13: 27,642,419 probably null Het
Prss16 T C 13: 22,009,409 D72G possibly damaging Het
Qrsl1 T C 10: 43,896,096 K33E probably benign Het
Rabepk A T 2: 34,795,234 I58N possibly damaging Het
Ralgapa1 A T 12: 55,717,071 H1403Q probably benign Het
Rhobtb3 C A 13: 75,872,365 C606F possibly damaging Het
Rnf216 G A 5: 143,090,926 H68Y probably benign Het
Scap T C 9: 110,381,593 C998R probably damaging Het
Scgb1b27 T C 7: 34,021,824 Y46H probably damaging Het
Sel1l2 T C 2: 140,244,165 Y502C probably damaging Het
Sf3a2 G T 10: 80,802,829 A95S probably benign Het
Sis A T 3: 72,913,194 F1412L probably benign Het
Slc25a29 A T 12: 108,835,661 C9S possibly damaging Het
Snap91 T C 9: 86,798,571 T427A probably benign Het
St3gal6 A G 16: 58,473,534 F211L probably damaging Het
Stab1 G A 14: 31,161,880 S240F probably benign Het
Sun3 T A 11: 9,023,371 K109* probably null Het
Syne1 T C 10: 5,041,484 N8410S probably benign Het
Tbx18 G T 9: 87,724,350 S247R probably damaging Het
Tenm3 T C 8: 48,276,169 I1601V probably benign Het
Tmem135 T C 7: 89,154,074 N297S probably damaging Het
Tnk1 C T 11: 69,855,191 probably null Het
Txnl4b A G 8: 109,568,919 probably benign Het
Uck1 T C 2: 32,258,303 D167G probably damaging Het
Vmn2r124 A T 17: 18,049,665 H61L possibly damaging Het
Xylt2 C T 11: 94,669,996 V239M possibly damaging Het
Zmpste24 T C 4: 121,097,965 D12G probably benign Het
Other mutations in Zscan25
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00309:Zscan25 APN 5 145,283,749 (GRCm38) missense probably damaging 1.00
IGL02622:Zscan25 APN 5 145,290,702 (GRCm38) missense probably damaging 1.00
IGL02881:Zscan25 APN 5 145,290,486 (GRCm38) missense probably benign 0.25
PIT4445001:Zscan25 UTSW 5 145,290,612 (GRCm38) missense probably damaging 1.00
R1713:Zscan25 UTSW 5 145,283,691 (GRCm38) missense probably damaging 0.99
R1828:Zscan25 UTSW 5 145,291,048 (GRCm38) missense possibly damaging 0.95
R3882:Zscan25 UTSW 5 145,291,052 (GRCm38) missense probably damaging 1.00
R4330:Zscan25 UTSW 5 145,290,551 (GRCm38) missense probably damaging 0.99
R4527:Zscan25 UTSW 5 145,283,458 (GRCm38) missense probably damaging 1.00
R4539:Zscan25 UTSW 5 145,288,391 (GRCm38) missense probably benign 0.01
R4598:Zscan25 UTSW 5 145,291,005 (GRCm38) missense probably benign 0.30
R4611:Zscan25 UTSW 5 145,291,116 (GRCm38) missense probably damaging 1.00
R4662:Zscan25 UTSW 5 145,286,310 (GRCm38) missense unknown
R6733:Zscan25 UTSW 5 145,290,913 (GRCm38) splice site probably null
R6751:Zscan25 UTSW 5 145,290,563 (GRCm38) missense probably damaging 1.00
R7161:Zscan25 UTSW 5 145,286,441 (GRCm38) missense probably benign 0.00
R7912:Zscan25 UTSW 5 145,290,511 (GRCm38) missense probably benign 0.00
R8746:Zscan25 UTSW 5 145,287,347 (GRCm38) missense possibly damaging 0.81
R8936:Zscan25 UTSW 5 145,286,390 (GRCm38) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GTGCTCCAGTGGTCAAACTG -3'
(R):5'- AATGGAGGAGGTCCCATGTC -3'

Sequencing Primer
(F):5'- TCGAGTCCCGAGGCATTTC -3'
(R):5'- AGGAGGTCCCATGTCTCATC -3'
Posted On 2014-10-15