Incidental Mutation 'R2242:Or2n1b'
| ID |
240709 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or2n1b
|
| Ensembl Gene |
ENSMUSG00000063240 |
| Gene Name |
olfactory receptor family 2 subfamily N member 1B |
| Synonyms |
GA_x6K02T2PSCP-2597192-2598130, MOR256-6, Olfr133 |
| MMRRC Submission |
040242-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.246)
|
| Stock # |
R2242 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
17 |
| Chromosomal Location |
38459481-38460419 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 38459613 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Isoleucine to Valine
at position 45
(I45V)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150597
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000113636]
[ENSMUST00000173610]
[ENSMUST00000215078]
[ENSMUST00000215549]
|
| AlphaFold |
Q8VG94 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000113636
AA Change: I45V
PolyPhen 2
Score 0.868 (Sensitivity: 0.83; Specificity: 0.93)
|
| SMART Domains |
Protein: ENSMUSP00000109266
Gene: ENSMUSG00000063240
AA Change: I45V
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7TM_GPCR_Srv
|
27 |
305 |
3.4e-7 |
PFAM |
|
Pfam:7tm_4
|
31 |
308 |
6.1e-52 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
1.5e-26 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000173610
AA Change: I45V
PolyPhen 2
Score 0.868 (Sensitivity: 0.83; Specificity: 0.93)
|
| SMART Domains |
Protein: ENSMUSP00000133824
Gene: ENSMUSG00000063240
AA Change: I45V
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_1
|
55 |
109 |
3.3e-8 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000215078
AA Change: I45V
PolyPhen 2
Score 0.868 (Sensitivity: 0.83; Specificity: 0.93)
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000215549
AA Change: I45V
PolyPhen 2
Score 0.868 (Sensitivity: 0.83; Specificity: 0.93)
|
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.0%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 25 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adcy2 |
A |
T |
13: 68,837,460 (GRCm39) |
S630T |
probably benign |
Het |
| Afap1l2 |
T |
C |
19: 56,902,900 (GRCm39) |
I760V |
possibly damaging |
Het |
| Cdc20 |
A |
G |
4: 118,290,722 (GRCm39) |
V426A |
probably benign |
Het |
| Clca3a2 |
T |
C |
3: 144,796,551 (GRCm39) |
S219G |
probably damaging |
Het |
| Corin |
A |
T |
5: 72,490,054 (GRCm39) |
D603E |
probably damaging |
Het |
| Dctn1 |
A |
G |
6: 83,176,687 (GRCm39) |
Y1205C |
probably damaging |
Het |
| Dync2h1 |
A |
T |
9: 7,037,828 (GRCm39) |
|
probably null |
Het |
| Dysf |
G |
A |
6: 84,163,491 (GRCm39) |
|
probably null |
Het |
| Eif1ad |
CGAGGAGGAGGAGGAGGAGG |
CGAGGAGGAGGAGGAGG |
19: 5,420,086 (GRCm39) |
|
probably benign |
Het |
| Fes |
T |
G |
7: 80,031,473 (GRCm39) |
E467A |
probably damaging |
Het |
| Ftsj3 |
T |
A |
11: 106,141,604 (GRCm39) |
Q548L |
probably benign |
Het |
| Gpc6 |
A |
T |
14: 117,424,199 (GRCm39) |
T96S |
probably benign |
Het |
| Hivep2 |
C |
A |
10: 14,004,713 (GRCm39) |
T437K |
probably benign |
Het |
| Jarid2 |
T |
A |
13: 45,059,752 (GRCm39) |
N661K |
probably damaging |
Het |
| Lama4 |
G |
A |
10: 38,902,689 (GRCm39) |
C221Y |
probably damaging |
Het |
| Malrd1 |
T |
C |
2: 16,106,755 (GRCm39) |
C1856R |
unknown |
Het |
| Mfsd6 |
G |
T |
1: 52,748,757 (GRCm39) |
P36Q |
probably benign |
Het |
| Ofcc1 |
A |
G |
13: 40,296,263 (GRCm39) |
S524P |
probably benign |
Het |
| Or13c3 |
A |
G |
4: 52,855,769 (GRCm39) |
V248A |
probably damaging |
Het |
| Ripor2 |
A |
G |
13: 24,855,755 (GRCm39) |
E65G |
probably benign |
Het |
| Sardh |
A |
T |
2: 27,125,527 (GRCm39) |
V329E |
possibly damaging |
Het |
| Slc37a3 |
A |
G |
6: 39,315,739 (GRCm39) |
S446P |
probably benign |
Het |
| Vmn2r57 |
T |
C |
7: 41,077,498 (GRCm39) |
T223A |
probably benign |
Het |
| Wdr47 |
A |
G |
3: 108,526,431 (GRCm39) |
D318G |
probably damaging |
Het |
| Zic4 |
C |
T |
9: 91,260,706 (GRCm39) |
|
probably benign |
Het |
|
| Other mutations in Or2n1b |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02212:Or2n1b
|
APN |
17 |
38,459,746 (GRCm39) |
missense |
probably benign |
|
|
IGL02486:Or2n1b
|
APN |
17 |
38,460,112 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02574:Or2n1b
|
APN |
17 |
38,460,280 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
PIT4243001:Or2n1b
|
UTSW |
17 |
38,460,394 (GRCm39) |
missense |
probably benign |
0.06 |
|
PIT4504001:Or2n1b
|
UTSW |
17 |
38,460,060 (GRCm39) |
missense |
probably benign |
|
|
R0726:Or2n1b
|
UTSW |
17 |
38,459,515 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2496:Or2n1b
|
UTSW |
17 |
38,460,322 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R4579:Or2n1b
|
UTSW |
17 |
38,460,296 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5085:Or2n1b
|
UTSW |
17 |
38,460,003 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6273:Or2n1b
|
UTSW |
17 |
38,459,833 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R6344:Or2n1b
|
UTSW |
17 |
38,459,611 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7046:Or2n1b
|
UTSW |
17 |
38,459,691 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7090:Or2n1b
|
UTSW |
17 |
38,460,385 (GRCm39) |
missense |
probably benign |
0.33 |
|
R7213:Or2n1b
|
UTSW |
17 |
38,459,965 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8874:Or2n1b
|
UTSW |
17 |
38,459,623 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R9185:Or2n1b
|
UTSW |
17 |
38,459,754 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9334:Or2n1b
|
UTSW |
17 |
38,459,840 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9703:Or2n1b
|
UTSW |
17 |
38,459,856 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
| Predicted Primers |
PCR Primer
(F):5'- CTTGGTTTCCATAGTCACAAGCAATG -3'
(R):5'- GCTGAACTGCACACCTCATG -3'
Sequencing Primer
(F):5'- CAAGCAATGGATCATGAGGTTTTGC -3'
(R):5'- ACACCTCATGTAGCTGATGG -3'
|
| Posted On |
2014-10-15 |
Incidental Mutation