Incidental Mutation 'R2287:Naalad2'
| ID |
244156 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Naalad2
|
| Ensembl Gene |
ENSMUSG00000043943 |
| Gene Name |
N-acetylated alpha-linked acidic dipeptidase 2 |
| Synonyms |
D9Ertd285e, NAALADASE2, GCPIII, GCP3, Folh1b, NAADALASE2 |
| MMRRC Submission |
040286-MU
|
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.269)
|
| Stock # |
R2287 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
9 |
| Chromosomal Location |
18233247-18308834 bp(-) (GRCm39) |
| Type of Mutation |
splice site |
| DNA Base Change (assembly) |
A to T
at 18246317 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000130752
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000001826]
[ENSMUST00000166825]
[ENSMUST00000172171]
|
| AlphaFold |
Q9CZR2 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000001826
|
| SMART Domains |
Protein: ENSMUSP00000001826
Gene: ENSMUSG00000043943
| Domain | Start | End | E-Value | Type |
|---|
|
transmembrane domain
|
47 |
69 |
N/A |
INTRINSIC |
|
Pfam:PA
|
198 |
290 |
2.2e-14 |
PFAM |
|
Pfam:Peptidase_M28
|
385 |
593 |
9.4e-22 |
PFAM |
|
Pfam:TFR_dimer
|
655 |
775 |
1.9e-35 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000166825
|
| SMART Domains |
Protein: ENSMUSP00000128674
Gene: ENSMUSG00000043943
| Domain | Start | End | E-Value | Type |
|---|
|
transmembrane domain
|
7 |
29 |
N/A |
INTRINSIC |
|
Pfam:PA
|
155 |
253 |
2.8e-14 |
PFAM |
|
Pfam:Peptidase_M28
|
360 |
554 |
8.2e-18 |
PFAM |
|
Pfam:TFR_dimer
|
616 |
739 |
3.8e-42 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000172171
|
| SMART Domains |
Protein: ENSMUSP00000130752
Gene: ENSMUSG00000043943
| Domain | Start | End | E-Value | Type |
|---|
|
transmembrane domain
|
47 |
69 |
N/A |
INTRINSIC |
|
Pfam:PA
|
193 |
291 |
3.5e-14 |
PFAM |
|
Pfam:Peptidase_M28
|
398 |
592 |
1.2e-17 |
PFAM |
|
Pfam:TFR_dimer
|
654 |
777 |
6.4e-42 |
PFAM |
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.2%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a member of the N-acetylated alpha-linked acidic dipeptidase (NAALADase) gene family. The representative member of this family is the gene encoding human prostate-specific membrane antigen (PSM), which is a marker of prostatic carcinomas and is the first to be shown to possess NAALADase activity. NAALADase cleaves N-acetyl-L-aspartate-L-glutamate (NAAG), which is a neuropeptide expressed both in the central nervous systems and in the periphery and is thought to function as a neurotransmitter. The product of this gene is a type II integral membrane protein. Transient transfection of this gene confers both NAALADase and dipetidyl peptidase IV activities to mammalian cells. This gene is highly expressed in ovary and testis as well as within discrete brain areas. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2014]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 21 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Clec4f |
CTT |
CT |
6: 83,630,247 (GRCm39) |
|
probably null |
Het |
| Dis3l |
T |
A |
9: 64,214,779 (GRCm39) |
Q930L |
probably benign |
Het |
| Edem2 |
T |
C |
2: 155,555,279 (GRCm39) |
K275E |
probably benign |
Het |
| Ehf |
T |
C |
2: 103,097,469 (GRCm39) |
I193V |
possibly damaging |
Het |
| Gsdma3 |
A |
G |
11: 98,528,830 (GRCm39) |
N428S |
possibly damaging |
Het |
| Gtf2h4 |
C |
A |
17: 35,982,117 (GRCm39) |
|
probably null |
Het |
| Kcnd3 |
C |
T |
3: 105,566,082 (GRCm39) |
A421V |
probably damaging |
Het |
| Ndufa8 |
C |
T |
2: 35,926,554 (GRCm39) |
A161T |
probably benign |
Het |
| Nlrp14 |
A |
T |
7: 106,781,869 (GRCm39) |
L355F |
probably damaging |
Het |
| Nsf |
C |
T |
11: 103,821,578 (GRCm39) |
E26K |
possibly damaging |
Het |
| Obscn |
T |
C |
11: 59,022,472 (GRCm39) |
R758G |
possibly damaging |
Het |
| Pcnx4 |
T |
C |
12: 72,622,172 (GRCm39) |
I1047T |
probably benign |
Het |
| Pcolce2 |
G |
A |
9: 95,560,458 (GRCm39) |
W169* |
probably null |
Het |
| Plxdc2 |
A |
G |
2: 16,517,001 (GRCm39) |
D94G |
probably benign |
Het |
| Rp1 |
A |
T |
1: 4,416,182 (GRCm39) |
Y1643* |
probably null |
Het |
| Skint4 |
A |
G |
4: 111,975,402 (GRCm39) |
T121A |
possibly damaging |
Het |
| Speg |
A |
G |
1: 75,407,109 (GRCm39) |
I3133V |
possibly damaging |
Het |
| Top2b |
T |
G |
14: 16,409,189 (GRCm38) |
I777M |
probably damaging |
Het |
| Trim34a |
T |
A |
7: 103,910,262 (GRCm39) |
S355T |
probably damaging |
Het |
| Trpv6 |
T |
G |
6: 41,603,045 (GRCm39) |
N276H |
probably damaging |
Het |
| Vps8 |
T |
C |
16: 21,387,163 (GRCm39) |
V1175A |
probably damaging |
Het |
|
| Other mutations in Naalad2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01337:Naalad2
|
APN |
9 |
18,238,669 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL02160:Naalad2
|
APN |
9 |
18,291,233 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03246:Naalad2
|
APN |
9 |
18,296,395 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
IGL03351:Naalad2
|
APN |
9 |
18,275,483 (GRCm39) |
missense |
possibly damaging |
0.57 |
|
ithaca
|
UTSW |
9 |
18,289,995 (GRCm39) |
missense |
probably damaging |
1.00 |
|
odysseus
|
UTSW |
9 |
18,287,829 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R0112:Naalad2
|
UTSW |
9 |
18,262,743 (GRCm39) |
nonsense |
probably null |
|
|
R0266:Naalad2
|
UTSW |
9 |
18,262,239 (GRCm39) |
splice site |
probably benign |
|
|
R0505:Naalad2
|
UTSW |
9 |
18,297,191 (GRCm39) |
missense |
probably benign |
|
|
R1077:Naalad2
|
UTSW |
9 |
18,258,802 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1442:Naalad2
|
UTSW |
9 |
18,262,328 (GRCm39) |
splice site |
probably benign |
|
|
R1553:Naalad2
|
UTSW |
9 |
18,289,965 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1694:Naalad2
|
UTSW |
9 |
18,238,683 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R1912:Naalad2
|
UTSW |
9 |
18,287,831 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1976:Naalad2
|
UTSW |
9 |
18,289,995 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2224:Naalad2
|
UTSW |
9 |
18,287,829 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R2225:Naalad2
|
UTSW |
9 |
18,287,829 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R2227:Naalad2
|
UTSW |
9 |
18,287,829 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R4126:Naalad2
|
UTSW |
9 |
18,258,766 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4784:Naalad2
|
UTSW |
9 |
18,262,214 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5426:Naalad2
|
UTSW |
9 |
18,258,815 (GRCm39) |
missense |
probably benign |
0.11 |
|
R5470:Naalad2
|
UTSW |
9 |
18,242,147 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5644:Naalad2
|
UTSW |
9 |
18,246,227 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R5888:Naalad2
|
UTSW |
9 |
18,241,937 (GRCm39) |
missense |
probably benign |
0.34 |
|
R6194:Naalad2
|
UTSW |
9 |
18,262,443 (GRCm39) |
missense |
probably benign |
0.23 |
|
R6238:Naalad2
|
UTSW |
9 |
18,296,361 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6701:Naalad2
|
UTSW |
9 |
18,296,444 (GRCm39) |
missense |
probably null |
0.05 |
|
R6764:Naalad2
|
UTSW |
9 |
18,314,185 (GRCm39) |
start gained |
probably benign |
|
|
R6791:Naalad2
|
UTSW |
9 |
18,296,426 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R7133:Naalad2
|
UTSW |
9 |
18,238,673 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7137:Naalad2
|
UTSW |
9 |
18,234,783 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7212:Naalad2
|
UTSW |
9 |
18,275,337 (GRCm39) |
splice site |
probably null |
|
|
R7588:Naalad2
|
UTSW |
9 |
18,262,775 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8024:Naalad2
|
UTSW |
9 |
18,308,769 (GRCm39) |
splice site |
probably benign |
|
|
R8409:Naalad2
|
UTSW |
9 |
18,242,134 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8413:Naalad2
|
UTSW |
9 |
18,241,939 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8703:Naalad2
|
UTSW |
9 |
18,290,008 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8810:Naalad2
|
UTSW |
9 |
18,297,230 (GRCm39) |
splice site |
probably benign |
|
|
R8979:Naalad2
|
UTSW |
9 |
18,242,146 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9178:Naalad2
|
UTSW |
9 |
18,242,152 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9256:Naalad2
|
UTSW |
9 |
18,274,534 (GRCm39) |
missense |
probably benign |
0.06 |
|
Z1177:Naalad2
|
UTSW |
9 |
18,262,398 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1186:Naalad2
|
UTSW |
9 |
18,297,110 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
| Predicted Primers |
PCR Primer
(F):5'- AGCAAGCATCGTTACAGTTCC -3'
(R):5'- CTGCCAAACTCTTGTCATATTCAG -3'
Sequencing Primer
(F):5'- AAGGTGAGCAGCTTTCCTC -3'
(R):5'- CAAACTCTTGTCATATTCAGTGTAGC -3'
|
| Posted On |
2014-10-30 |
Incidental Mutation