Incidental Mutation 'R2289:Dcaf10'
| ID |
244200 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Dcaf10
|
| Ensembl Gene |
ENSMUSG00000035572 |
| Gene Name |
DDB1 and CUL4 associated factor 10 |
| Synonyms |
Wdr32 |
| MMRRC Submission |
040288-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R2289 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
4 |
| Chromosomal Location |
45342101-45379759 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 45359816 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tryptophan to Arginine
at position 244
(W244R)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000117082
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000155551]
|
| AlphaFold |
A2AKB9 |
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000107798
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000130821
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000155551
AA Change: W244R
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000117082
Gene: ENSMUSG00000035572
AA Change: W244R
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
46 |
N/A |
INTRINSIC |
|
low complexity region
|
80 |
107 |
N/A |
INTRINSIC |
|
low complexity region
|
110 |
132 |
N/A |
INTRINSIC |
|
WD40
|
166 |
203 |
1.71e1 |
SMART |
|
WD40
|
206 |
245 |
7.85e-7 |
SMART |
|
WD40
|
249 |
288 |
2.59e-7 |
SMART |
|
WD40
|
295 |
334 |
2.05e1 |
SMART |
|
low complexity region
|
352 |
374 |
N/A |
INTRINSIC |
|
Blast:WD40
|
468 |
506 |
3e-10 |
BLAST |
|
WD40
|
524 |
563 |
1.31e-3 |
SMART |
|
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.5%
- 10x: 97.2%
- 20x: 95.0%
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 34 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Atp12a |
G |
A |
14: 56,610,719 (GRCm39) |
V288I |
possibly damaging |
Het |
| Cntn6 |
C |
T |
6: 104,545,989 (GRCm39) |
|
probably benign |
Het |
| Col1a2 |
G |
A |
6: 4,518,822 (GRCm39) |
|
probably benign |
Het |
| Cplx3 |
T |
A |
9: 57,520,941 (GRCm39) |
E220V |
possibly damaging |
Het |
| Cracdl |
T |
C |
1: 37,651,342 (GRCm39) |
K1175R |
possibly damaging |
Het |
| Dixdc1 |
A |
G |
9: 50,595,172 (GRCm39) |
|
probably null |
Het |
| Dlg4 |
T |
A |
11: 69,917,752 (GRCm39) |
Y12N |
probably damaging |
Het |
| Fsd1l |
T |
A |
4: 53,696,931 (GRCm39) |
Y442N |
possibly damaging |
Het |
| Grm7 |
G |
T |
6: 110,623,309 (GRCm39) |
V161F |
probably damaging |
Het |
| Hcrt |
C |
A |
11: 100,652,745 (GRCm39) |
A90S |
probably damaging |
Het |
| Itga6 |
T |
A |
2: 71,648,873 (GRCm39) |
V119D |
probably damaging |
Het |
| Klrh1 |
T |
C |
6: 129,745,140 (GRCm39) |
N152S |
probably null |
Het |
| Lmtk2 |
T |
A |
5: 144,112,924 (GRCm39) |
S1215T |
possibly damaging |
Het |
| Loxl2 |
G |
A |
14: 69,930,524 (GRCm39) |
E763K |
probably benign |
Het |
| Mcrip1 |
T |
C |
11: 120,435,530 (GRCm39) |
E35G |
probably damaging |
Het |
| Nle1 |
T |
A |
11: 82,793,879 (GRCm39) |
I386F |
probably benign |
Het |
| Nqo1 |
T |
C |
8: 108,119,630 (GRCm39) |
I8V |
probably benign |
Het |
| Nsf |
C |
T |
11: 103,821,578 (GRCm39) |
E26K |
possibly damaging |
Het |
| Pax8 |
T |
C |
2: 24,330,752 (GRCm39) |
D227G |
probably benign |
Het |
| Phf14 |
T |
C |
6: 12,047,845 (GRCm39) |
C885R |
probably damaging |
Het |
| Rhobtb3 |
A |
C |
13: 76,059,046 (GRCm39) |
C251G |
probably damaging |
Het |
| Samd13 |
C |
T |
3: 146,368,446 (GRCm39) |
A49T |
probably damaging |
Het |
| Snrpa1 |
T |
A |
7: 65,713,586 (GRCm39) |
V101E |
probably benign |
Het |
| Styx |
A |
G |
14: 45,592,404 (GRCm39) |
E20G |
possibly damaging |
Het |
| Thoc1 |
T |
C |
18: 9,984,488 (GRCm39) |
Y325H |
probably damaging |
Het |
| Tmem163 |
T |
A |
1: 127,423,477 (GRCm39) |
T262S |
possibly damaging |
Het |
| Tsr1 |
T |
G |
11: 74,790,111 (GRCm39) |
L102R |
probably damaging |
Het |
| Vash1 |
G |
C |
12: 86,726,952 (GRCm39) |
R64P |
probably damaging |
Het |
| Vps13b |
A |
C |
15: 35,572,251 (GRCm39) |
D956A |
probably damaging |
Het |
| Vrk1 |
G |
A |
12: 106,024,120 (GRCm39) |
G199S |
probably damaging |
Het |
| Vrk3 |
C |
T |
7: 44,424,866 (GRCm39) |
T427M |
probably benign |
Het |
| Zfp870 |
A |
T |
17: 33,102,334 (GRCm39) |
S333T |
probably benign |
Het |
| Zranb1 |
T |
C |
7: 132,551,768 (GRCm39) |
Y140H |
probably damaging |
Het |
| Zscan4b |
A |
G |
7: 10,635,789 (GRCm39) |
|
probably null |
Het |
|
| Other mutations in Dcaf10 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02431:Dcaf10
|
APN |
4 |
45,342,630 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL02660:Dcaf10
|
APN |
4 |
45,372,769 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R0048:Dcaf10
|
UTSW |
4 |
45,374,262 (GRCm39) |
nonsense |
probably null |
|
|
R0550:Dcaf10
|
UTSW |
4 |
45,372,753 (GRCm39) |
missense |
probably benign |
|
|
R0611:Dcaf10
|
UTSW |
4 |
45,373,011 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2973:Dcaf10
|
UTSW |
4 |
45,373,957 (GRCm39) |
missense |
probably benign |
0.04 |
|
R3610:Dcaf10
|
UTSW |
4 |
45,372,962 (GRCm39) |
nonsense |
probably null |
|
|
R3735:Dcaf10
|
UTSW |
4 |
45,348,117 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4655:Dcaf10
|
UTSW |
4 |
45,372,769 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R4665:Dcaf10
|
UTSW |
4 |
45,372,769 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R4690:Dcaf10
|
UTSW |
4 |
45,372,769 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R4724:Dcaf10
|
UTSW |
4 |
45,372,769 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R4725:Dcaf10
|
UTSW |
4 |
45,372,769 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R4735:Dcaf10
|
UTSW |
4 |
45,372,769 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R4743:Dcaf10
|
UTSW |
4 |
45,370,409 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R5220:Dcaf10
|
UTSW |
4 |
45,373,909 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R5254:Dcaf10
|
UTSW |
4 |
45,370,415 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R5855:Dcaf10
|
UTSW |
4 |
45,342,558 (GRCm39) |
missense |
probably benign |
0.18 |
|
R6833:Dcaf10
|
UTSW |
4 |
45,373,043 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7132:Dcaf10
|
UTSW |
4 |
45,342,391 (GRCm39) |
missense |
probably benign |
|
|
R7345:Dcaf10
|
UTSW |
4 |
45,342,583 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7366:Dcaf10
|
UTSW |
4 |
45,373,919 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7832:Dcaf10
|
UTSW |
4 |
45,348,196 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- AGAATGGCTGGGGTTCTACC -3'
(R):5'- GCAGAACACTGAACTTGCTC -3'
Sequencing Primer
(F):5'- CTGGGGTTCTACCGGGAG -3'
(R):5'- GAACTTGCTCCCCACCTTTTAAAGAG -3'
|
| Posted On |
2014-10-30 |
Incidental Mutation