Incidental Mutation 'R2368:Lyst'
ID |
246407 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Lyst
|
Ensembl Gene |
ENSMUSG00000019726 |
Gene Name |
lysosomal trafficking regulator |
Synonyms |
D13Sfk13 |
Accession Numbers |
Ncbi RefSeq: NM_010748.2; MGI:107448
|
Essential gene? |
Possibly non essential
(E-score: 0.298)
|
Stock # |
R2368 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
13 |
Chromosomal Location |
13590397-13778803 bp(+) (GRCm38) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 13696663 bp (GRCm38)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Serine to Cysteine
at position 2662
(S2662C)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000106188
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000110559]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000110559
AA Change: S2662C
PolyPhen 2
Score 0.959 (Sensitivity: 0.78; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000106188 Gene: ENSMUSG00000019726 AA Change: S2662C
Domain | Start | End | E-Value | Type |
low complexity region
|
26 |
36 |
N/A |
INTRINSIC |
low complexity region
|
72 |
82 |
N/A |
INTRINSIC |
low complexity region
|
399 |
412 |
N/A |
INTRINSIC |
low complexity region
|
1333 |
1344 |
N/A |
INTRINSIC |
low complexity region
|
2295 |
2307 |
N/A |
INTRINSIC |
low complexity region
|
2427 |
2445 |
N/A |
INTRINSIC |
low complexity region
|
2534 |
2546 |
N/A |
INTRINSIC |
Pfam:PH_BEACH
|
3006 |
3101 |
5.8e-25 |
PFAM |
Beach
|
3118 |
3408 |
1.25e-193 |
SMART |
Blast:Beach
|
3441 |
3478 |
9e-13 |
BLAST |
WD40
|
3539 |
3579 |
5.75e-1 |
SMART |
WD40
|
3591 |
3630 |
2.89e-5 |
SMART |
WD40
|
3633 |
3676 |
1.38e0 |
SMART |
WD40
|
3724 |
3765 |
1.27e-1 |
SMART |
|
Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 97.3%
- 20x: 95.0%
|
Validation Efficiency |
|
MGI Phenotype |
Strain: 1855968
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that regulates intracellular protein trafficking in endosomes, and may be involved in pigmentation. Mutations in this gene are associated with Chediak-Higashi syndrome, a lysosomal storage disorder. Alternative splicing results in multiple transcript variants, though the full-length nature of some of these variants has not been determined. [provided by RefSeq, Apr 2013] PHENOTYPE: Homozygous mice have a phenotype similar to human Chediak-Higashi syndrome patients, exhibiting lysosomal dysfunction with resultant protein storage; diluted coat color; abnormal melanogenesis; immune cell dysfunction resulting in increased susceptibility to bacterial, viral, and parasitic infections and decreased cytotoxic activity against tumor cells. [provided by MGI curators]
|
Allele List at MGI |
All alleles(52) : Targeted(3) Gene trapped(34) Spontaneous(8) Chemically induced(6) Radiation induced(1)
|
Other mutations in this stock |
Total: 18 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Arid2 |
A |
G |
15: 96,350,012 |
K102E |
possibly damaging |
Het |
Bsn |
G |
A |
9: 108,111,030 |
Q2508* |
probably null |
Het |
Cc2d2a |
A |
G |
5: 43,703,888 |
T549A |
probably benign |
Het |
Nek9 |
A |
G |
12: 85,329,887 |
V240A |
possibly damaging |
Het |
Nol4l |
T |
C |
2: 153,418,039 |
D165G |
probably damaging |
Het |
Olfr1098 |
A |
T |
2: 86,923,107 |
Y142N |
probably benign |
Het |
Olfr126 |
A |
T |
17: 37,850,618 |
M9L |
probably benign |
Het |
Olfr1335 |
A |
G |
4: 118,809,822 |
V14A |
probably benign |
Het |
Olfr494 |
A |
G |
7: 108,368,369 |
Y293C |
probably damaging |
Het |
Plin5 |
T |
C |
17: 56,115,588 |
E116G |
probably damaging |
Het |
Slc35d2 |
C |
T |
13: 64,129,305 |
M1I |
probably null |
Het |
Srgap1 |
A |
T |
10: 121,829,289 |
S493T |
probably benign |
Het |
Syt9 |
T |
A |
7: 107,436,699 |
Y308N |
probably damaging |
Het |
Ttc23l |
CT |
CTTGGATT |
15: 10,537,562 |
|
probably benign |
Het |
Ttc23l |
G |
A |
15: 10,537,566 |
S206L |
probably benign |
Het |
Vmn2r74 |
C |
T |
7: 85,961,314 |
D57N |
probably benign |
Het |
Vstm5 |
A |
T |
9: 15,257,731 |
M166L |
probably benign |
Het |
Zbtb12 |
T |
C |
17: 34,895,698 |
L153P |
possibly damaging |
Het |
|
Other mutations in Lyst |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00156:Lyst
|
APN |
13 |
13648878 |
missense |
probably benign |
|
IGL00474:Lyst
|
APN |
13 |
13643536 |
missense |
possibly damaging |
0.48 |
IGL00484:Lyst
|
APN |
13 |
13709603 |
missense |
probably benign |
0.02 |
IGL00492:Lyst
|
APN |
13 |
13678175 |
missense |
possibly damaging |
0.54 |
IGL00807:Lyst
|
APN |
13 |
13650423 |
missense |
possibly damaging |
0.91 |
IGL00949:Lyst
|
APN |
13 |
13635485 |
missense |
possibly damaging |
0.87 |
IGL00952:Lyst
|
APN |
13 |
13678107 |
missense |
probably benign |
0.05 |
IGL01305:Lyst
|
APN |
13 |
13678056 |
missense |
probably benign |
0.01 |
IGL01317:Lyst
|
APN |
13 |
13670870 |
missense |
probably benign |
|
IGL01419:Lyst
|
APN |
13 |
13635838 |
missense |
probably benign |
0.00 |
IGL01445:Lyst
|
APN |
13 |
13651714 |
missense |
probably benign |
0.00 |
IGL01690:Lyst
|
APN |
13 |
13743246 |
missense |
probably damaging |
1.00 |
IGL01791:Lyst
|
APN |
13 |
13635302 |
missense |
probably damaging |
1.00 |
IGL01809:Lyst
|
APN |
13 |
13637803 |
missense |
probably damaging |
1.00 |
IGL01896:Lyst
|
APN |
13 |
13635577 |
missense |
probably benign |
0.04 |
IGL01938:Lyst
|
APN |
13 |
13637424 |
missense |
possibly damaging |
0.93 |
IGL01986:Lyst
|
APN |
13 |
13775627 |
critical splice donor site |
probably null |
|
IGL02022:Lyst
|
APN |
13 |
13664044 |
nonsense |
probably null |
|
IGL02044:Lyst
|
APN |
13 |
13712846 |
missense |
probably damaging |
1.00 |
IGL02157:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02185:Lyst
|
APN |
13 |
13661093 |
nonsense |
probably null |
|
IGL02215:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02245:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02246:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02247:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02297:Lyst
|
APN |
13 |
13638092 |
nonsense |
probably null |
|
IGL02411:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02415:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02419:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02420:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02429:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02501:Lyst
|
APN |
13 |
13711645 |
missense |
probably benign |
0.02 |
IGL02522:Lyst
|
APN |
13 |
13634705 |
missense |
possibly damaging |
0.81 |
IGL02535:Lyst
|
APN |
13 |
13650342 |
missense |
probably benign |
0.00 |
IGL02596:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02601:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02603:Lyst
|
APN |
13 |
13660956 |
missense |
probably benign |
|
IGL02608:Lyst
|
APN |
13 |
13712754 |
missense |
probably damaging |
0.98 |
IGL02622:Lyst
|
APN |
13 |
13681390 |
missense |
probably damaging |
1.00 |
IGL02690:Lyst
|
APN |
13 |
13641125 |
missense |
possibly damaging |
0.58 |
IGL02715:Lyst
|
APN |
13 |
13674320 |
splice site |
probably null |
|
IGL02725:Lyst
|
APN |
13 |
13760827 |
missense |
probably damaging |
1.00 |
IGL02729:Lyst
|
APN |
13 |
13674339 |
missense |
possibly damaging |
0.81 |
IGL02729:Lyst
|
APN |
13 |
13746609 |
missense |
possibly damaging |
0.95 |
IGL02820:Lyst
|
APN |
13 |
13638058 |
missense |
probably benign |
0.03 |
IGL02945:Lyst
|
APN |
13 |
13761198 |
missense |
possibly damaging |
0.48 |
IGL02981:Lyst
|
APN |
13 |
13634911 |
missense |
probably damaging |
0.99 |
IGL03087:Lyst
|
APN |
13 |
13635056 |
missense |
probably damaging |
1.00 |
IGL03149:Lyst
|
APN |
13 |
13681444 |
missense |
probably benign |
0.14 |
IGL03158:Lyst
|
APN |
13 |
13651752 |
critical splice donor site |
probably null |
|
IGL03226:Lyst
|
APN |
13 |
13709559 |
missense |
probably benign |
0.01 |
IGL03242:Lyst
|
APN |
13 |
13656881 |
nonsense |
probably null |
|
IGL03385:Lyst
|
APN |
13 |
13656980 |
nonsense |
probably null |
|
50-cal
|
UTSW |
13 |
13708212 |
critical splice donor site |
probably null |
|
charcoal
|
UTSW |
13 |
13696761 |
nonsense |
probably null |
|
charlotte_gray
|
UTSW |
13 |
13602026 |
intron |
probably benign |
|
charzard
|
UTSW |
13 |
13647083 |
nonsense |
probably null |
|
grey_wolf
|
UTSW |
13 |
|
unclassified |
|
|
lightspeed
|
UTSW |
13 |
13740536 |
missense |
possibly damaging |
0.91 |
pardon
|
UTSW |
13 |
13677952 |
missense |
probably benign |
0.00 |
robin
|
UTSW |
13 |
13648802 |
nonsense |
probably null |
|
sooty
|
UTSW |
13 |
|
unclassified |
|
|
souris
|
UTSW |
13 |
13683223 |
unclassified |
probably benign |
|
Swallow
|
UTSW |
13 |
13757422 |
missense |
probably benign |
0.00 |
vulpix
|
UTSW |
13 |
13696794 |
splice site |
probably null |
|
ANU22:Lyst
|
UTSW |
13 |
13678056 |
missense |
probably benign |
0.01 |
IGL02835:Lyst
|
UTSW |
13 |
13661100 |
missense |
possibly damaging |
0.82 |
P0031:Lyst
|
UTSW |
13 |
13664031 |
missense |
probably damaging |
1.00 |
R0012:Lyst
|
UTSW |
13 |
13687694 |
missense |
probably benign |
0.10 |
R0012:Lyst
|
UTSW |
13 |
13687694 |
missense |
probably benign |
0.10 |
R0031:Lyst
|
UTSW |
13 |
13708156 |
missense |
probably benign |
0.14 |
R0115:Lyst
|
UTSW |
13 |
13677952 |
missense |
probably benign |
0.00 |
R0212:Lyst
|
UTSW |
13 |
13635985 |
missense |
possibly damaging |
0.93 |
R0386:Lyst
|
UTSW |
13 |
13708214 |
splice site |
probably benign |
|
R0393:Lyst
|
UTSW |
13 |
13647079 |
missense |
probably benign |
0.01 |
R0415:Lyst
|
UTSW |
13 |
13711610 |
splice site |
probably benign |
|
R0446:Lyst
|
UTSW |
13 |
13638048 |
missense |
probably benign |
0.00 |
R0481:Lyst
|
UTSW |
13 |
13677952 |
missense |
probably benign |
0.00 |
R0499:Lyst
|
UTSW |
13 |
13616713 |
missense |
probably damaging |
1.00 |
R0506:Lyst
|
UTSW |
13 |
13638015 |
missense |
probably benign |
|
R0530:Lyst
|
UTSW |
13 |
13757306 |
splice site |
probably benign |
|
R0541:Lyst
|
UTSW |
13 |
13681293 |
missense |
probably benign |
0.00 |
R0570:Lyst
|
UTSW |
13 |
13709386 |
missense |
probably benign |
0.26 |
R0680:Lyst
|
UTSW |
13 |
13650341 |
missense |
probably benign |
0.01 |
R0842:Lyst
|
UTSW |
13 |
13678241 |
nonsense |
probably null |
|
R0848:Lyst
|
UTSW |
13 |
13634930 |
missense |
probably benign |
0.00 |
R1014:Lyst
|
UTSW |
13 |
13634060 |
missense |
possibly damaging |
0.49 |
R1205:Lyst
|
UTSW |
13 |
13680202 |
missense |
probably benign |
|
R1251:Lyst
|
UTSW |
13 |
13634483 |
missense |
probably benign |
0.00 |
R1304:Lyst
|
UTSW |
13 |
13751984 |
nonsense |
probably null |
|
R1398:Lyst
|
UTSW |
13 |
13740536 |
missense |
possibly damaging |
0.91 |
R1445:Lyst
|
UTSW |
13 |
13640054 |
missense |
possibly damaging |
0.94 |
R1475:Lyst
|
UTSW |
13 |
13708212 |
critical splice donor site |
probably null |
|
R1479:Lyst
|
UTSW |
13 |
13634482 |
missense |
probably benign |
0.00 |
R1484:Lyst
|
UTSW |
13 |
13678190 |
missense |
probably benign |
0.01 |
R1498:Lyst
|
UTSW |
13 |
13650375 |
missense |
possibly damaging |
0.49 |
R1540:Lyst
|
UTSW |
13 |
13635101 |
missense |
possibly damaging |
0.81 |
R1611:Lyst
|
UTSW |
13 |
13634897 |
missense |
probably damaging |
0.97 |
R1653:Lyst
|
UTSW |
13 |
13635226 |
missense |
probably damaging |
1.00 |
R1669:Lyst
|
UTSW |
13 |
13644087 |
missense |
possibly damaging |
0.90 |
R1686:Lyst
|
UTSW |
13 |
13634705 |
missense |
possibly damaging |
0.81 |
R1694:Lyst
|
UTSW |
13 |
13661161 |
missense |
probably damaging |
0.98 |
R1747:Lyst
|
UTSW |
13 |
13757422 |
missense |
probably benign |
0.00 |
R1793:Lyst
|
UTSW |
13 |
13647083 |
nonsense |
probably null |
|
R1871:Lyst
|
UTSW |
13 |
13651712 |
missense |
probably benign |
0.00 |
R1905:Lyst
|
UTSW |
13 |
13634134 |
missense |
probably benign |
|
R1958:Lyst
|
UTSW |
13 |
13616618 |
missense |
probably damaging |
1.00 |
R1969:Lyst
|
UTSW |
13 |
13730344 |
missense |
probably damaging |
0.99 |
R2040:Lyst
|
UTSW |
13 |
13641222 |
missense |
probably benign |
0.00 |
R2109:Lyst
|
UTSW |
13 |
13712820 |
missense |
possibly damaging |
0.46 |
R2116:Lyst
|
UTSW |
13 |
13635701 |
missense |
probably damaging |
0.99 |
R2121:Lyst
|
UTSW |
13 |
13660971 |
missense |
probably damaging |
1.00 |
R2127:Lyst
|
UTSW |
13 |
13635262 |
missense |
probably damaging |
1.00 |
R2187:Lyst
|
UTSW |
13 |
13709341 |
missense |
possibly damaging |
0.61 |
R2238:Lyst
|
UTSW |
13 |
13743263 |
missense |
probably benign |
0.41 |
R2258:Lyst
|
UTSW |
13 |
13637658 |
missense |
probably benign |
0.00 |
R2292:Lyst
|
UTSW |
13 |
13740495 |
missense |
probably damaging |
1.00 |
R2908:Lyst
|
UTSW |
13 |
13669873 |
missense |
probably benign |
0.03 |
R3001:Lyst
|
UTSW |
13 |
13696705 |
missense |
probably benign |
|
R3002:Lyst
|
UTSW |
13 |
13696705 |
missense |
probably benign |
|
R3024:Lyst
|
UTSW |
13 |
13658687 |
missense |
probably benign |
|
R3113:Lyst
|
UTSW |
13 |
13669927 |
missense |
probably benign |
0.12 |
R3406:Lyst
|
UTSW |
13 |
13635230 |
missense |
possibly damaging |
0.56 |
R3972:Lyst
|
UTSW |
13 |
13706625 |
missense |
possibly damaging |
0.67 |
R3978:Lyst
|
UTSW |
13 |
13634168 |
missense |
possibly damaging |
0.82 |
R4032:Lyst
|
UTSW |
13 |
13616665 |
missense |
probably damaging |
1.00 |
R4192:Lyst
|
UTSW |
13 |
13740513 |
missense |
probably damaging |
1.00 |
R4206:Lyst
|
UTSW |
13 |
13635989 |
missense |
probably benign |
0.03 |
R4298:Lyst
|
UTSW |
13 |
13634887 |
missense |
probably damaging |
1.00 |
R4344:Lyst
|
UTSW |
13 |
13698466 |
missense |
probably benign |
0.06 |
R4441:Lyst
|
UTSW |
13 |
13635383 |
missense |
probably damaging |
1.00 |
R4445:Lyst
|
UTSW |
13 |
13709564 |
missense |
probably benign |
0.42 |
R4477:Lyst
|
UTSW |
13 |
13635383 |
missense |
probably damaging |
1.00 |
R4493:Lyst
|
UTSW |
13 |
13635383 |
missense |
probably damaging |
1.00 |
R4494:Lyst
|
UTSW |
13 |
13635383 |
missense |
probably damaging |
1.00 |
R4495:Lyst
|
UTSW |
13 |
13635383 |
missense |
probably damaging |
1.00 |
R4622:Lyst
|
UTSW |
13 |
13674398 |
missense |
probably benign |
0.01 |
R4638:Lyst
|
UTSW |
13 |
13696794 |
splice site |
probably null |
|
R4658:Lyst
|
UTSW |
13 |
13635383 |
missense |
probably damaging |
1.00 |
R4675:Lyst
|
UTSW |
13 |
13635383 |
missense |
probably damaging |
1.00 |
R4719:Lyst
|
UTSW |
13 |
13650350 |
missense |
probably benign |
|
R4729:Lyst
|
UTSW |
13 |
13637901 |
missense |
probably damaging |
1.00 |
R4774:Lyst
|
UTSW |
13 |
13740597 |
missense |
probably damaging |
1.00 |
R4811:Lyst
|
UTSW |
13 |
13777100 |
missense |
probably benign |
0.33 |
R4877:Lyst
|
UTSW |
13 |
13683149 |
missense |
probably damaging |
1.00 |
R4920:Lyst
|
UTSW |
13 |
13647060 |
missense |
possibly damaging |
0.79 |
R4933:Lyst
|
UTSW |
13 |
13637764 |
missense |
probably damaging |
0.98 |
R4933:Lyst
|
UTSW |
13 |
13759378 |
missense |
probably benign |
0.12 |
R4958:Lyst
|
UTSW |
13 |
13635463 |
missense |
probably benign |
0.00 |
R4982:Lyst
|
UTSW |
13 |
13725954 |
missense |
probably damaging |
1.00 |
R4992:Lyst
|
UTSW |
13 |
13661163 |
missense |
probably damaging |
1.00 |
R5024:Lyst
|
UTSW |
13 |
13634404 |
missense |
probably benign |
|
R5049:Lyst
|
UTSW |
13 |
13636064 |
missense |
probably damaging |
1.00 |
R5079:Lyst
|
UTSW |
13 |
13757353 |
missense |
probably benign |
0.08 |
R5254:Lyst
|
UTSW |
13 |
13683070 |
missense |
probably benign |
0.00 |
R5266:Lyst
|
UTSW |
13 |
13660970 |
missense |
probably damaging |
1.00 |
R5279:Lyst
|
UTSW |
13 |
13648802 |
nonsense |
probably null |
|
R5285:Lyst
|
UTSW |
13 |
13634426 |
missense |
probably benign |
0.01 |
R5364:Lyst
|
UTSW |
13 |
13656854 |
missense |
probably benign |
0.35 |
R5435:Lyst
|
UTSW |
13 |
13777064 |
missense |
possibly damaging |
0.64 |
R5516:Lyst
|
UTSW |
13 |
13644122 |
missense |
probably benign |
0.10 |
R5524:Lyst
|
UTSW |
13 |
13746779 |
missense |
probably benign |
0.03 |
R5591:Lyst
|
UTSW |
13 |
13743333 |
missense |
probably damaging |
0.99 |
R5592:Lyst
|
UTSW |
13 |
13743333 |
missense |
probably damaging |
0.99 |
R5593:Lyst
|
UTSW |
13 |
13743333 |
missense |
probably damaging |
0.99 |
R5594:Lyst
|
UTSW |
13 |
13743333 |
missense |
probably damaging |
0.99 |
R5594:Lyst
|
UTSW |
13 |
13759397 |
missense |
probably benign |
0.00 |
R5644:Lyst
|
UTSW |
13 |
13637496 |
missense |
possibly damaging |
0.58 |
R5659:Lyst
|
UTSW |
13 |
13634627 |
missense |
possibly damaging |
0.58 |
R5741:Lyst
|
UTSW |
13 |
13634030 |
missense |
probably benign |
0.44 |
R5908:Lyst
|
UTSW |
13 |
13696761 |
nonsense |
probably null |
|
R5969:Lyst
|
UTSW |
13 |
13687813 |
splice site |
probably null |
|
R6128:Lyst
|
UTSW |
13 |
13759379 |
missense |
possibly damaging |
0.67 |
R6271:Lyst
|
UTSW |
13 |
13658754 |
missense |
probably benign |
0.30 |
R6315:Lyst
|
UTSW |
13 |
13643504 |
missense |
probably benign |
|
R6318:Lyst
|
UTSW |
13 |
13743311 |
missense |
possibly damaging |
0.88 |
R6555:Lyst
|
UTSW |
13 |
13648925 |
missense |
probably benign |
0.01 |
R6663:Lyst
|
UTSW |
13 |
13664116 |
splice site |
probably null |
|
R6701:Lyst
|
UTSW |
13 |
13681485 |
missense |
probably benign |
0.06 |
R6711:Lyst
|
UTSW |
13 |
13635235 |
missense |
possibly damaging |
0.80 |
R6909:Lyst
|
UTSW |
13 |
13743375 |
missense |
probably damaging |
1.00 |
R6915:Lyst
|
UTSW |
13 |
13726044 |
missense |
probably benign |
0.01 |
R6929:Lyst
|
UTSW |
13 |
13743324 |
missense |
probably damaging |
1.00 |
R6960:Lyst
|
UTSW |
13 |
13634078 |
missense |
probably benign |
0.12 |
R7018:Lyst
|
UTSW |
13 |
13743459 |
critical splice donor site |
probably null |
|
R7037:Lyst
|
UTSW |
13 |
13616666 |
missense |
probably damaging |
1.00 |
R7045:Lyst
|
UTSW |
13 |
13634900 |
missense |
probably benign |
0.34 |
R7045:Lyst
|
UTSW |
13 |
13637708 |
missense |
probably damaging |
1.00 |
R7070:Lyst
|
UTSW |
13 |
13757444 |
missense |
probably benign |
0.23 |
R7188:Lyst
|
UTSW |
13 |
13752090 |
missense |
possibly damaging |
0.66 |
R7201:Lyst
|
UTSW |
13 |
13709300 |
nonsense |
probably null |
|
R7210:Lyst
|
UTSW |
13 |
13656983 |
missense |
probably damaging |
1.00 |
R7229:Lyst
|
UTSW |
13 |
13643509 |
missense |
probably benign |
0.00 |
R7293:Lyst
|
UTSW |
13 |
13680237 |
missense |
probably benign |
0.01 |
R7318:Lyst
|
UTSW |
13 |
13757443 |
missense |
probably benign |
0.13 |
R7344:Lyst
|
UTSW |
13 |
13706555 |
missense |
probably benign |
|
R7426:Lyst
|
UTSW |
13 |
13637524 |
missense |
probably benign |
|
R7522:Lyst
|
UTSW |
13 |
13647083 |
nonsense |
probably null |
|
R7583:Lyst
|
UTSW |
13 |
13635887 |
missense |
probably damaging |
1.00 |
R7606:Lyst
|
UTSW |
13 |
13637475 |
missense |
probably damaging |
1.00 |
R7636:Lyst
|
UTSW |
13 |
13616747 |
critical splice donor site |
probably null |
|
R7658:Lyst
|
UTSW |
13 |
13730476 |
missense |
possibly damaging |
0.63 |
R7685:Lyst
|
UTSW |
13 |
13669865 |
missense |
probably benign |
0.00 |
R7689:Lyst
|
UTSW |
13 |
13683223 |
critical splice donor site |
probably null |
|
R7765:Lyst
|
UTSW |
13 |
13709532 |
missense |
possibly damaging |
0.75 |
R7779:Lyst
|
UTSW |
13 |
13634543 |
missense |
probably damaging |
1.00 |
R7871:Lyst
|
UTSW |
13 |
13636052 |
nonsense |
probably null |
|
R7872:Lyst
|
UTSW |
13 |
13635865 |
missense |
probably benign |
0.14 |
R7884:Lyst
|
UTSW |
13 |
13707683 |
missense |
probably benign |
0.09 |
R7890:Lyst
|
UTSW |
13 |
13740569 |
missense |
probably damaging |
0.99 |
R7916:Lyst
|
UTSW |
13 |
13647072 |
missense |
possibly damaging |
0.64 |
R7948:Lyst
|
UTSW |
13 |
13746589 |
missense |
possibly damaging |
0.59 |
R7956:Lyst
|
UTSW |
13 |
13641203 |
missense |
possibly damaging |
0.80 |
R8048:Lyst
|
UTSW |
13 |
13687645 |
missense |
probably benign |
0.12 |
R8085:Lyst
|
UTSW |
13 |
13634309 |
missense |
probably damaging |
0.98 |
R8165:Lyst
|
UTSW |
13 |
13698360 |
missense |
probably damaging |
0.99 |
R8235:Lyst
|
UTSW |
13 |
13760738 |
missense |
possibly damaging |
0.69 |
R8237:Lyst
|
UTSW |
13 |
13651732 |
missense |
probably benign |
0.00 |
R8275:Lyst
|
UTSW |
13 |
13776082 |
missense |
probably benign |
0.02 |
R8300:Lyst
|
UTSW |
13 |
13664058 |
missense |
possibly damaging |
0.79 |
R8350:Lyst
|
UTSW |
13 |
13650388 |
nonsense |
probably null |
|
R8526:Lyst
|
UTSW |
13 |
13760806 |
missense |
probably damaging |
0.99 |
R8551:Lyst
|
UTSW |
13 |
13634060 |
missense |
possibly damaging |
0.77 |
R8723:Lyst
|
UTSW |
13 |
13712757 |
missense |
possibly damaging |
0.89 |
R8772:Lyst
|
UTSW |
13 |
13637492 |
nonsense |
probably null |
|
R8778:Lyst
|
UTSW |
13 |
13635776 |
missense |
possibly damaging |
0.89 |
R8778:Lyst
|
UTSW |
13 |
13728567 |
missense |
possibly damaging |
0.89 |
R8801:Lyst
|
UTSW |
13 |
13661010 |
missense |
probably benign |
0.10 |
R8837:Lyst
|
UTSW |
13 |
13677963 |
missense |
probably benign |
|
R8874:Lyst
|
UTSW |
13 |
13637562 |
missense |
probably benign |
|
R8878:Lyst
|
UTSW |
13 |
13641076 |
missense |
probably benign |
0.00 |
R8891:Lyst
|
UTSW |
13 |
13712850 |
missense |
possibly damaging |
0.67 |
R9077:Lyst
|
UTSW |
13 |
13683108 |
missense |
probably benign |
0.02 |
R9127:Lyst
|
UTSW |
13 |
13634242 |
missense |
probably damaging |
1.00 |
R9143:Lyst
|
UTSW |
13 |
13661165 |
missense |
probably damaging |
0.98 |
R9216:Lyst
|
UTSW |
13 |
13648603 |
missense |
probably benign |
|
R9217:Lyst
|
UTSW |
13 |
13696660 |
missense |
probably benign |
0.01 |
R9291:Lyst
|
UTSW |
13 |
13709353 |
missense |
probably benign |
0.01 |
R9302:Lyst
|
UTSW |
13 |
13730362 |
missense |
possibly damaging |
0.46 |
R9370:Lyst
|
UTSW |
13 |
13760748 |
missense |
probably damaging |
1.00 |
R9402:Lyst
|
UTSW |
13 |
13637878 |
missense |
probably benign |
|
R9457:Lyst
|
UTSW |
13 |
13687745 |
missense |
possibly damaging |
0.83 |
R9481:Lyst
|
UTSW |
13 |
13683068 |
missense |
possibly damaging |
0.68 |
R9563:Lyst
|
UTSW |
13 |
13637823 |
missense |
probably benign |
0.36 |
R9623:Lyst
|
UTSW |
13 |
13678002 |
missense |
probably benign |
|
R9661:Lyst
|
UTSW |
13 |
13634194 |
missense |
probably benign |
0.01 |
R9682:Lyst
|
UTSW |
13 |
13656941 |
missense |
probably benign |
0.21 |
R9743:Lyst
|
UTSW |
13 |
13634738 |
missense |
possibly damaging |
0.67 |
R9801:Lyst
|
UTSW |
13 |
13634705 |
missense |
probably damaging |
0.97 |
RF001:Lyst
|
UTSW |
13 |
13635841 |
missense |
probably benign |
|
RF002:Lyst
|
UTSW |
13 |
13634363 |
missense |
probably benign |
0.05 |
X0024:Lyst
|
UTSW |
13 |
13634448 |
missense |
probably benign |
0.00 |
X0026:Lyst
|
UTSW |
13 |
13751970 |
missense |
probably damaging |
0.99 |
Z1088:Lyst
|
UTSW |
13 |
13743433 |
missense |
probably benign |
0.09 |
Z1176:Lyst
|
UTSW |
13 |
13640107 |
missense |
probably damaging |
1.00 |
Z1176:Lyst
|
UTSW |
13 |
13777079 |
missense |
probably benign |
0.27 |
Z1177:Lyst
|
UTSW |
13 |
13680134 |
missense |
possibly damaging |
0.73 |
|
Predicted Primers |
PCR Primer
(F):5'- GCTATGTCAGATGTCCTCAGTG -3'
(R):5'- CATTTTGTAACAGGTTAGCCAAGC -3'
Sequencing Primer
(F):5'- GTCAGATGTCCTCAGTGTTACTTATC -3'
(R):5'- TGAGTTCAAAGTCAACCTAGGC -3'
|
Posted On |
2014-10-30 |