Incidental Mutation 'R2340:Or9q2'
| ID |
246732 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or9q2
|
| Ensembl Gene |
ENSMUSG00000044040 |
| Gene Name |
olfactory receptor family 9 subfamily Q member 2 |
| Synonyms |
GA_x6K02T2RE5P-4127765-4126821, Olfr1497, MOR212-1 |
| MMRRC Submission |
040326-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.236)
|
| Stock # |
R2340 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
19 |
| Chromosomal Location |
13772029-13772973 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 13772135 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Alanine
at position 280
(V280A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149151
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000061993]
[ENSMUST00000217384]
|
| AlphaFold |
Q8VG11 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000061993
AA Change: V280A
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| SMART Domains |
Protein: ENSMUSP00000053465
Gene: ENSMUSG00000044040
AA Change: V280A
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
1.3e-46 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
302 |
7e-7 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
5.5e-21 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000217384
AA Change: V280A
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| Meta Mutation Damage Score |
0.1030 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.1%
|
| Validation Efficiency |
97% (37/38) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 37 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2700049A03Rik |
G |
T |
12: 71,211,320 (GRCm39) |
E685* |
probably null |
Het |
| 2700049A03Rik |
A |
T |
12: 71,211,321 (GRCm39) |
E685V |
possibly damaging |
Het |
| Abca13 |
A |
T |
11: 9,349,165 (GRCm39) |
I3580F |
probably damaging |
Het |
| B3glct |
A |
G |
5: 149,668,905 (GRCm39) |
K280E |
probably benign |
Het |
| Chd6 |
TG |
T |
2: 160,807,679 (GRCm39) |
|
probably null |
Het |
| Clu |
T |
C |
14: 66,218,358 (GRCm39) |
V406A |
probably damaging |
Het |
| D930020B18Rik |
A |
G |
10: 121,490,741 (GRCm39) |
K114E |
probably damaging |
Het |
| Dsg1c |
T |
A |
18: 20,400,945 (GRCm39) |
D149E |
probably damaging |
Het |
| Entrep2 |
A |
G |
7: 64,425,565 (GRCm39) |
S176P |
probably benign |
Het |
| Fat2 |
A |
T |
11: 55,160,922 (GRCm39) |
D3269E |
possibly damaging |
Het |
| Frmd4a |
A |
G |
2: 4,591,187 (GRCm39) |
D69G |
probably damaging |
Het |
| Hacd1 |
G |
T |
2: 14,040,698 (GRCm39) |
P186T |
probably damaging |
Het |
| Hlx |
G |
T |
1: 184,464,184 (GRCm39) |
A52D |
probably damaging |
Het |
| Kif2c |
A |
G |
4: 117,027,038 (GRCm39) |
V320A |
probably damaging |
Het |
| Lypd2 |
T |
A |
15: 74,606,103 (GRCm39) |
I12L |
probably benign |
Het |
| Midn |
G |
T |
10: 79,985,946 (GRCm39) |
R12L |
possibly damaging |
Het |
| Or2b6 |
T |
C |
13: 21,822,757 (GRCm39) |
K312R |
probably benign |
Het |
| Or8g34 |
A |
G |
9: 39,373,105 (GRCm39) |
Y126C |
probably damaging |
Het |
| Pkhd1 |
A |
T |
1: 20,271,079 (GRCm39) |
V3158E |
probably damaging |
Het |
| Plxna2 |
C |
T |
1: 194,431,625 (GRCm39) |
S538F |
probably damaging |
Het |
| Rad51d |
T |
C |
11: 82,772,647 (GRCm39) |
D206G |
probably damaging |
Het |
| Rcan1 |
A |
G |
16: 92,194,240 (GRCm39) |
F58L |
probably damaging |
Het |
| Rnf145 |
T |
C |
11: 44,422,205 (GRCm39) |
I96T |
probably benign |
Het |
| Rnf216 |
A |
T |
5: 143,066,089 (GRCm39) |
F500I |
probably damaging |
Het |
| Rph3al |
T |
C |
11: 75,724,258 (GRCm39) |
T282A |
probably benign |
Het |
| Serpina11 |
T |
C |
12: 103,951,002 (GRCm39) |
R240G |
probably benign |
Het |
| Slc12a2 |
T |
A |
18: 58,033,122 (GRCm39) |
I400N |
probably benign |
Het |
| Slco1a4 |
C |
A |
6: 141,787,103 (GRCm39) |
C28F |
probably benign |
Het |
| Sned1 |
T |
A |
1: 93,184,174 (GRCm39) |
I134N |
probably damaging |
Het |
| Spock3 |
T |
A |
8: 63,798,747 (GRCm39) |
M253K |
probably damaging |
Het |
| Tmem184b |
T |
A |
15: 79,262,732 (GRCm39) |
M42L |
probably benign |
Het |
| Tnnt1 |
G |
A |
7: 4,516,615 (GRCm39) |
|
probably benign |
Het |
| Ttll5 |
T |
A |
12: 85,938,922 (GRCm39) |
S407T |
probably benign |
Het |
| Ugcg |
C |
T |
4: 59,207,798 (GRCm39) |
P46S |
probably benign |
Het |
| Vmn2r112 |
T |
A |
17: 22,822,096 (GRCm39) |
V258E |
probably damaging |
Het |
| Zfat |
T |
C |
15: 67,973,390 (GRCm39) |
E1117G |
probably damaging |
Het |
| Zfp606 |
A |
G |
7: 12,227,016 (GRCm39) |
E321G |
possibly damaging |
Het |
|
| Other mutations in Or9q2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02377:Or9q2
|
APN |
19 |
13,772,693 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
IGL02471:Or9q2
|
APN |
19 |
13,772,589 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0167:Or9q2
|
UTSW |
19 |
13,772,931 (GRCm39) |
missense |
probably benign |
0.03 |
|
R0602:Or9q2
|
UTSW |
19 |
13,772,026 (GRCm39) |
splice site |
probably null |
|
|
R1448:Or9q2
|
UTSW |
19 |
13,772,140 (GRCm39) |
nonsense |
probably null |
|
|
R2211:Or9q2
|
UTSW |
19 |
13,772,733 (GRCm39) |
missense |
probably benign |
|
|
R2295:Or9q2
|
UTSW |
19 |
13,772,108 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3773:Or9q2
|
UTSW |
19 |
13,772,568 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4596:Or9q2
|
UTSW |
19 |
13,772,264 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4676:Or9q2
|
UTSW |
19 |
13,772,838 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R4767:Or9q2
|
UTSW |
19 |
13,772,409 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4921:Or9q2
|
UTSW |
19 |
13,772,829 (GRCm39) |
missense |
probably benign |
0.03 |
|
R4930:Or9q2
|
UTSW |
19 |
13,772,915 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5784:Or9q2
|
UTSW |
19 |
13,772,710 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7402:Or9q2
|
UTSW |
19 |
13,772,358 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7473:Or9q2
|
UTSW |
19 |
13,772,526 (GRCm39) |
missense |
probably benign |
0.11 |
|
R8140:Or9q2
|
UTSW |
19 |
13,772,603 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R9112:Or9q2
|
UTSW |
19 |
13,772,780 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9359:Or9q2
|
UTSW |
19 |
13,772,200 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9375:Or9q2
|
UTSW |
19 |
13,772,214 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- AAGTAAAGATGGGGTGTTTCAGTAC -3'
(R):5'- TGGCCATTATGCAAATCCGC -3'
Sequencing Primer
(F):5'- TTGAGTTCAAGAAAGCCTGCC -3'
(R):5'- ATTATGCAAATCCGCTCAGCTGG -3'
|
| Posted On |
2014-10-30 |
Incidental Mutation