Incidental Mutation 'R2354:Bpifb9b'
| ID |
246816 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Bpifb9b
|
| Ensembl Gene |
ENSMUSG00000067996 |
| Gene Name |
BPI fold containing family B, member 9B |
| Synonyms |
OTTMUSG00000015915, 5430413K10Rik |
| MMRRC Submission |
040336-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.130)
|
| Stock # |
R2354 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
2 |
| Chromosomal Location |
154307227-154320646 bp(+) (GRCm38) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 154311742 bp (GRCm38)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Leucine to Phenylalanine
at position 243
(L243F)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000086311
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000088921]
|
| AlphaFold |
A2AJD1 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000088921
AA Change: L243F
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| SMART Domains |
Protein: ENSMUSP00000086311
Gene: ENSMUSG00000067996
AA Change: L243F
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
29 |
42 |
N/A |
INTRINSIC |
|
low complexity region
|
60 |
77 |
N/A |
INTRINSIC |
|
low complexity region
|
122 |
157 |
N/A |
INTRINSIC |
|
low complexity region
|
167 |
181 |
N/A |
INTRINSIC |
|
low complexity region
|
184 |
203 |
N/A |
INTRINSIC |
|
Pfam:LBP_BPI_CETP
|
216 |
377 |
1.7e-11 |
PFAM |
|
| Meta Mutation Damage Score |
0.0898 |
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 97.4%
- 20x: 95.2%
|
| Validation Efficiency |
97% (34/35) |
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 34 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Ap3b2 |
C |
T |
7: 81,473,850 (GRCm38) |
|
probably benign |
Het |
| B4galt3 |
C |
A |
1: 171,274,043 (GRCm38) |
H196N |
probably damaging |
Het |
| Cd226 |
A |
T |
18: 89,246,983 (GRCm38) |
|
probably null |
Het |
| Cdh15 |
G |
A |
8: 122,862,024 (GRCm38) |
R279Q |
probably damaging |
Het |
| Cep295 |
A |
G |
9: 15,334,784 (GRCm38) |
I792T |
possibly damaging |
Het |
| Cfap46 |
T |
C |
7: 139,661,046 (GRCm38) |
Y469C |
probably damaging |
Het |
| Col9a2 |
C |
G |
4: 121,054,258 (GRCm38) |
R599G |
probably damaging |
Het |
| D630045J12Rik |
G |
A |
6: 38,158,091 (GRCm38) |
P1385S |
possibly damaging |
Het |
| Ddb1 |
A |
T |
19: 10,606,973 (GRCm38) |
M64L |
probably benign |
Het |
| Dyrk1b |
G |
A |
7: 28,185,372 (GRCm38) |
R404Q |
possibly damaging |
Het |
| Gal3st2b |
A |
G |
1: 93,939,786 (GRCm38) |
T52A |
probably damaging |
Het |
| Galk2 |
C |
A |
2: 125,931,273 (GRCm38) |
S208R |
probably benign |
Het |
| Hap1 |
A |
T |
11: 100,354,715 (GRCm38) |
I141N |
probably damaging |
Het |
| Hif3a |
T |
C |
7: 17,041,105 (GRCm38) |
S523G |
probably damaging |
Het |
| Kirrel1 |
C |
T |
3: 87,088,485 (GRCm38) |
V381I |
probably damaging |
Het |
| Lmbrd1 |
T |
C |
1: 24,685,541 (GRCm38) |
S69P |
probably damaging |
Het |
| Lrriq1 |
C |
T |
10: 103,189,987 (GRCm38) |
V925M |
probably damaging |
Het |
| Mmp16 |
A |
G |
4: 18,112,001 (GRCm38) |
Y459C |
probably damaging |
Het |
| Mtr |
A |
G |
13: 12,188,157 (GRCm38) |
|
probably benign |
Het |
| Nadk2 |
T |
A |
15: 9,085,782 (GRCm38) |
I167N |
probably damaging |
Het |
| Neo1 |
A |
G |
9: 58,985,634 (GRCm38) |
F242L |
probably benign |
Het |
| Pitpnm2 |
A |
T |
5: 124,122,919 (GRCm38) |
V1010E |
probably damaging |
Het |
| Prp2rt |
G |
A |
13: 97,098,801 (GRCm38) |
T146I |
probably damaging |
Het |
| Semp2l2b |
G |
T |
10: 22,067,256 (GRCm38) |
T275K |
probably benign |
Het |
| Shox2 |
A |
G |
3: 66,981,489 (GRCm38) |
I23T |
possibly damaging |
Het |
| Slc5a12 |
T |
C |
2: 110,609,432 (GRCm38) |
V141A |
probably damaging |
Het |
| Sstr5 |
A |
G |
17: 25,491,901 (GRCm38) |
I118T |
probably benign |
Het |
| Taar4 |
A |
G |
10: 23,961,014 (GRCm38) |
N174S |
probably damaging |
Het |
| Tpcn2 |
C |
A |
7: 145,257,218 (GRCm38) |
G581W |
probably damaging |
Het |
| Umod |
C |
T |
7: 119,466,193 (GRCm38) |
V538M |
probably damaging |
Het |
| Vmn2r44 |
T |
G |
7: 8,370,640 (GRCm38) |
S517R |
probably damaging |
Het |
| Zc3h12d |
G |
T |
10: 7,867,938 (GRCm38) |
V491L |
probably benign |
Het |
| Zfp358 |
A |
T |
8: 3,495,454 (GRCm38) |
H12L |
possibly damaging |
Het |
| Zkscan7 |
A |
G |
9: 122,894,827 (GRCm38) |
D287G |
probably benign |
Het |
|
| Other mutations in Bpifb9b |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01621:Bpifb9b
|
APN |
2 |
154,316,951 (GRCm38) |
splice site |
probably null |
|
|
IGL02119:Bpifb9b
|
APN |
2 |
154,313,624 (GRCm38) |
missense |
possibly damaging |
0.84 |
|
IGL02658:Bpifb9b
|
APN |
2 |
154,311,281 (GRCm38) |
missense |
probably benign |
0.00 |
|
R0230:Bpifb9b
|
UTSW |
2 |
154,317,075 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R0269:Bpifb9b
|
UTSW |
2 |
154,319,625 (GRCm38) |
missense |
probably benign |
0.00 |
|
R0617:Bpifb9b
|
UTSW |
2 |
154,319,625 (GRCm38) |
missense |
probably benign |
0.00 |
|
R1953:Bpifb9b
|
UTSW |
2 |
154,311,314 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R2050:Bpifb9b
|
UTSW |
2 |
154,309,604 (GRCm38) |
missense |
possibly damaging |
0.93 |
|
R2160:Bpifb9b
|
UTSW |
2 |
154,319,675 (GRCm38) |
missense |
possibly damaging |
0.53 |
|
R2200:Bpifb9b
|
UTSW |
2 |
154,313,654 (GRCm38) |
missense |
probably benign |
0.00 |
|
R4755:Bpifb9b
|
UTSW |
2 |
154,319,694 (GRCm38) |
missense |
probably benign |
0.01 |
|
R4872:Bpifb9b
|
UTSW |
2 |
154,313,631 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R4914:Bpifb9b
|
UTSW |
2 |
154,314,106 (GRCm38) |
splice site |
probably null |
|
|
R4915:Bpifb9b
|
UTSW |
2 |
154,314,106 (GRCm38) |
splice site |
probably null |
|
|
R4917:Bpifb9b
|
UTSW |
2 |
154,314,106 (GRCm38) |
splice site |
probably null |
|
|
R4918:Bpifb9b
|
UTSW |
2 |
154,314,106 (GRCm38) |
splice site |
probably null |
|
|
R4950:Bpifb9b
|
UTSW |
2 |
154,311,659 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R5438:Bpifb9b
|
UTSW |
2 |
154,309,368 (GRCm38) |
missense |
possibly damaging |
0.65 |
|
R5507:Bpifb9b
|
UTSW |
2 |
154,317,027 (GRCm38) |
missense |
possibly damaging |
0.91 |
|
R6255:Bpifb9b
|
UTSW |
2 |
154,309,364 (GRCm38) |
missense |
probably damaging |
0.98 |
|
R7130:Bpifb9b
|
UTSW |
2 |
154,311,672 (GRCm38) |
missense |
probably damaging |
0.98 |
|
R7161:Bpifb9b
|
UTSW |
2 |
154,313,615 (GRCm38) |
missense |
possibly damaging |
0.95 |
|
R7736:Bpifb9b
|
UTSW |
2 |
154,312,105 (GRCm38) |
missense |
probably benign |
0.00 |
|
R8536:Bpifb9b
|
UTSW |
2 |
154,316,277 (GRCm38) |
missense |
probably benign |
0.00 |
|
R9134:Bpifb9b
|
UTSW |
2 |
154,309,521 (GRCm38) |
missense |
probably benign |
|
|
R9348:Bpifb9b
|
UTSW |
2 |
154,318,846 (GRCm38) |
missense |
probably benign |
0.28 |
|
R9528:Bpifb9b
|
UTSW |
2 |
154,311,377 (GRCm38) |
missense |
probably benign |
0.02 |
|
| Predicted Primers |
PCR Primer
(F):5'- GTGGTCTTGGCCAGCTAATC -3'
(R):5'- TTCCAGAGAGACTTCTAGGGG -3'
Sequencing Primer
(F):5'- TCTTGGCCAGCTAATCCCAGG -3'
(R):5'- GAAGTCAGTATGTCTCTCTATGGAAG -3'
|
| Posted On |
2014-10-30 |
Incidental Mutation