Incidental Mutation 'R2370:Or5w18'
| ID |
247487 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5w18
|
| Ensembl Gene |
ENSMUSG00000068815 |
| Gene Name |
olfactory receptor family 5 subfamily W member 18 |
| Synonyms |
MOR177-14, Olfr1143, GA_x6K02T2Q125-49303473-49304405 |
| MMRRC Submission |
040350-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.144)
|
| Stock # |
R2370 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
2 |
| Chromosomal Location |
87632735-87633679 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 87633159 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Asparagine to Isoleucine
at position 142
(N142I)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000088210
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000090708]
[ENSMUST00000099852]
[ENSMUST00000111568]
|
| AlphaFold |
Q8VEU8 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000090708
AA Change: N142I
PolyPhen 2
Score 0.348 (Sensitivity: 0.90; Specificity: 0.89)
|
| SMART Domains |
Protein: ENSMUSP00000088210
Gene: ENSMUSG00000068815
AA Change: N142I
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
35 |
312 |
2.6e-45 |
PFAM |
|
Pfam:7tm_1
|
45 |
294 |
5.8e-20 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000099852
AA Change: N138I
PolyPhen 2
Score 0.187 (Sensitivity: 0.92; Specificity: 0.87)
|
| SMART Domains |
Protein: ENSMUSP00000097438
Gene: ENSMUSG00000068815
AA Change: N138I
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
307 |
2e-41 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
4.3e-14 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000111568
AA Change: N138I
PolyPhen 2
Score 0.187 (Sensitivity: 0.92; Specificity: 0.87)
|
| SMART Domains |
Protein: ENSMUSP00000107194
Gene: ENSMUSG00000068815
AA Change: N138I
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
1.5e-44 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
2.8e-16 |
PFAM |
|
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.7%
- 20x: 92.8%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 29 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| A2ml1 |
C |
T |
6: 128,557,349 (GRCm39) |
A115T |
probably benign |
Het |
| Abca13 |
A |
G |
11: 9,206,185 (GRCm39) |
T162A |
possibly damaging |
Het |
| Adamts9 |
T |
A |
6: 92,837,184 (GRCm39) |
D578V |
probably damaging |
Het |
| Atp6v1a |
T |
C |
16: 43,927,403 (GRCm39) |
T295A |
probably benign |
Het |
| Brinp1 |
A |
G |
4: 68,681,184 (GRCm39) |
S449P |
probably damaging |
Het |
| Ccdc40 |
A |
G |
11: 119,153,943 (GRCm39) |
T1072A |
probably benign |
Het |
| Chil4 |
C |
A |
3: 106,121,616 (GRCm39) |
E78* |
probably null |
Het |
| Cul7 |
A |
G |
17: 46,972,567 (GRCm39) |
Y1250C |
probably damaging |
Het |
| Dock3 |
T |
C |
9: 106,829,554 (GRCm39) |
D1120G |
probably damaging |
Het |
| Gfod1 |
A |
G |
13: 43,354,621 (GRCm39) |
M118T |
probably benign |
Het |
| Ints5 |
A |
G |
19: 8,874,143 (GRCm39) |
T701A |
probably benign |
Het |
| Map4k2 |
G |
T |
19: 6,391,958 (GRCm39) |
E91* |
probably null |
Het |
| Mast4 |
T |
A |
13: 102,910,695 (GRCm39) |
E457D |
probably damaging |
Het |
| Mettl4 |
T |
C |
17: 95,040,576 (GRCm39) |
D404G |
probably damaging |
Het |
| Mgat4a |
A |
G |
1: 37,503,614 (GRCm39) |
F58L |
probably damaging |
Het |
| Myh4 |
A |
G |
11: 67,146,454 (GRCm39) |
K1476E |
probably damaging |
Het |
| Myl7 |
T |
C |
11: 5,846,684 (GRCm39) |
E175G |
probably damaging |
Het |
| Myo18a |
A |
G |
11: 77,668,596 (GRCm39) |
E152G |
probably benign |
Het |
| Ncan |
G |
A |
8: 70,565,463 (GRCm39) |
T187I |
probably benign |
Het |
| Nfatc3 |
A |
G |
8: 106,835,087 (GRCm39) |
Y803C |
probably damaging |
Het |
| Nlrp4f |
T |
C |
13: 65,338,660 (GRCm39) |
Y659C |
probably damaging |
Het |
| Noxred1 |
T |
C |
12: 87,273,820 (GRCm39) |
T74A |
probably benign |
Het |
| Ntrk2 |
A |
T |
13: 59,202,248 (GRCm39) |
M619L |
probably benign |
Het |
| Orc4 |
A |
G |
2: 48,823,111 (GRCm39) |
V120A |
probably benign |
Het |
| Polq |
T |
A |
16: 36,894,301 (GRCm39) |
Y2037N |
probably damaging |
Het |
| Rimbp2 |
A |
G |
5: 128,880,908 (GRCm39) |
C160R |
probably damaging |
Het |
| Rps6ka4 |
T |
C |
19: 6,807,468 (GRCm39) |
S721G |
possibly damaging |
Het |
| Skap2 |
C |
T |
6: 51,898,310 (GRCm39) |
R140Q |
probably damaging |
Het |
| Srprb |
C |
T |
9: 103,074,755 (GRCm39) |
R838H |
probably damaging |
Het |
|
| Other mutations in Or5w18 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01086:Or5w18
|
APN |
2 |
87,633,544 (GRCm39) |
nonsense |
probably null |
|
|
IGL01670:Or5w18
|
APN |
2 |
87,633,224 (GRCm39) |
missense |
probably benign |
0.10 |
|
IGL02503:Or5w18
|
APN |
2 |
87,632,864 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0316:Or5w18
|
UTSW |
2 |
87,633,525 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1381:Or5w18
|
UTSW |
2 |
87,633,480 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1496:Or5w18
|
UTSW |
2 |
87,633,212 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1753:Or5w18
|
UTSW |
2 |
87,633,106 (GRCm39) |
missense |
probably benign |
0.06 |
|
R2013:Or5w18
|
UTSW |
2 |
87,632,847 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R3810:Or5w18
|
UTSW |
2 |
87,633,396 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R3812:Or5w18
|
UTSW |
2 |
87,633,396 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R3909:Or5w18
|
UTSW |
2 |
87,633,031 (GRCm39) |
missense |
probably benign |
|
|
R4227:Or5w18
|
UTSW |
2 |
87,633,219 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R5753:Or5w18
|
UTSW |
2 |
87,633,596 (GRCm39) |
missense |
probably benign |
0.05 |
|
R6516:Or5w18
|
UTSW |
2 |
87,633,114 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R9101:Or5w18
|
UTSW |
2 |
87,632,924 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9144:Or5w18
|
UTSW |
2 |
87,633,482 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1177:Or5w18
|
UTSW |
2 |
87,633,572 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- TTGGGCCCAAGATGTTAATGG -3'
(R):5'- TGGTGCTCAATTCAATGAACC -3'
Sequencing Primer
(F):5'- GCCCAAGATGTTAATGGACATATTTG -3'
(R):5'- ATTGCTAACTCATTGACCTGTGTATC -3'
|
| Posted On |
2014-11-11 |
Incidental Mutation