Mutagenetix > Incidental Mutation

Incidental Mutation 'R2405:Gulo'

247979

Institutional Source

Beutler Lab

Gene Symbol

Gulo

Ensembl Gene

ENSMUSG00000034450

Gene Name

gulonolactone (L-) oxidase

Synonyms

sfx, L-gulono-gamma-lactone oxidase

MMRRC Submission

040371-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.115) question?

Stock #

R2405 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

66224235-66246656 bp(-) (GRCm39)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

A to G at 66228477 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000060912 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000059970] [ENSMUST00000059970]

AlphaFold

P58710

Predicted Effect

probably null
Transcript: ENSMUST00000059970

SMART Domains

Protein: ENSMUSP00000060912
Gene: ENSMUSG00000034450

Domain	Start	End	E-Value	Type
Pfam:FAD_binding_4	21	156	7.6e-36	PFAM
Pfam:ALO	180	438	2.8e-92	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000059970

SMART Domains

Protein: ENSMUSP00000060912
Gene: ENSMUSG00000034450

Domain	Start	End	E-Value	Type
Pfam:FAD_binding_4	21	156	7.6e-36	PFAM
Pfam:ALO	180	438	2.8e-92	PFAM

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 96.9%
20x: 94.0%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Homozygotes for spontaneous mutations exhibit impaired growth and mobility, decreased spleen and thymus weights, reduced serum calcium, phosphate, alkaline phosphatase, IGF1, and osteocalcin levels, and small, fragile and histologically abnormal bones. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 45 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700012B07Rik	G	T	11: 109,684,980 (GRCm39)	C172*	probably null	Het
Abl1	T	C	2: 31,690,986 (GRCm39)	L835P	possibly damaging	Het
Ascc3	T	A	10: 50,607,774 (GRCm39)	V1426D	probably damaging	Het
Ccny	A	G	18: 9,353,480 (GRCm39)	Y98H	probably benign	Het
Ccser2	G	A	14: 36,660,626 (GRCm39)	T509M	probably damaging	Het
Crnkl1	A	T	2: 145,770,077 (GRCm39)	Y255*	probably null	Het
Cyp2d11	C	T	15: 82,273,467 (GRCm39)	S468N	possibly damaging	Het
Dnah7b	C	A	1: 46,402,114 (GRCm39)	T3983N	probably benign	Het
Ebf1	T	A	11: 44,882,349 (GRCm39)	M427K	probably damaging	Het
Fxr1	T	A	3: 34,116,003 (GRCm39)	S438T	probably damaging	Het
Gabrr1	A	T	4: 33,157,110 (GRCm39)	D209V	probably damaging	Het
Gbx2	G	T	1: 89,858,630 (GRCm39)		probably benign	Het
Gng14	A	G	8: 85,794,270 (GRCm39)	I56T	possibly damaging	Het
Hhla1	A	T	15: 65,808,160 (GRCm39)	L295*	probably null	Het
Hmcn1	T	A	1: 150,736,092 (GRCm39)	I126L	probably damaging	Het
Hpse	A	G	5: 100,856,637 (GRCm39)	S121P	possibly damaging	Het
Inpp5d	A	G	1: 87,627,451 (GRCm39)	H321R	possibly damaging	Het
Kalrn	C	T	16: 33,810,180 (GRCm39)	D2525N	possibly damaging	Het
Kdm5b	T	A	1: 134,536,754 (GRCm39)	M658K	probably damaging	Het
Kidins220	A	T	12: 25,061,508 (GRCm39)	E875V	probably damaging	Het
Lrrc37	T	C	11: 103,511,810 (GRCm39)	M53V	unknown	Het
Nlrp4b	A	G	7: 10,448,655 (GRCm39)	E286G	probably benign	Het
Nsf	C	T	11: 103,821,578 (GRCm39)	E26K	possibly damaging	Het
Pde3a	A	T	6: 141,426,968 (GRCm39)	I710F	probably damaging	Het
Phb1	T	C	11: 95,566,094 (GRCm39)	I126T	probably benign	Het
Ppp4r1	C	T	17: 66,118,341 (GRCm39)	T164I	possibly damaging	Het
Psmc1	G	A	12: 100,086,362 (GRCm39)	R333Q	probably benign	Het
Pygb	A	G	2: 150,662,695 (GRCm39)	Y554C	probably benign	Het
Ror2	G	A	13: 53,284,980 (GRCm39)	P144L	possibly damaging	Het
Serpina3a	A	T	12: 104,087,577 (GRCm39)	M357L	possibly damaging	Het
Serpinb9e	T	A	13: 33,444,063 (GRCm39)	M361K	probably benign	Het
Sgms1	G	A	19: 32,137,072 (GRCm39)	R165*	probably null	Het
Slc15a2	G	A	16: 36,572,199 (GRCm39)	Q691*	probably null	Het
Slc25a25	C	T	2: 32,307,731 (GRCm39)		probably null	Het
Slc34a2	A	G	5: 53,215,523 (GRCm39)	N9S	probably benign	Het
Slc4a2	A	G	5: 24,640,599 (GRCm39)	T665A	probably damaging	Het
Spef2	C	A	15: 9,626,120 (GRCm39)	E1149*	probably null	Het
Tmem179	A	G	12: 112,468,347 (GRCm39)	W45R	probably damaging	Het
Tmpo	C	A	10: 90,999,216 (GRCm39)	K190N	probably damaging	Het
Triml1	T	C	8: 43,583,320 (GRCm39)	Y427C	probably damaging	Het
Trpm2	A	G	10: 77,770,558 (GRCm39)	L720P	probably damaging	Het
Vmn1r60	A	G	7: 5,547,912 (GRCm39)	Y63H	probably benign	Het
Vmn2r96	T	A	17: 18,818,102 (GRCm39)	C560S	probably damaging	Het
Vps35l	G	C	7: 118,391,818 (GRCm39)	A410P	probably damaging	Het
Zdhhc13	A	G	7: 48,472,478 (GRCm39)		probably null	Het

Other mutations in Gulo

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00325:Gulo	APN	14	66,243,398 (GRCm39)	missense	probably damaging	1.00
IGL01736:Gulo	APN	14	66,234,325 (GRCm39)	missense	probably benign	0.24
R0599:Gulo	UTSW	14	66,227,890 (GRCm39)	missense	probably damaging	1.00
R2014:Gulo	UTSW	14	66,246,496 (GRCm39)	start codon destroyed	probably benign
R2058:Gulo	UTSW	14	66,228,608 (GRCm39)	missense	possibly damaging	0.51
R2079:Gulo	UTSW	14	66,227,832 (GRCm39)	missense	probably damaging	1.00
R4196:Gulo	UTSW	14	66,225,702 (GRCm39)	missense	possibly damaging	0.49
R4807:Gulo	UTSW	14	66,227,833 (GRCm39)	missense	probably benign	0.00
R5341:Gulo	UTSW	14	66,225,707 (GRCm39)	missense	probably benign	0.12
R5913:Gulo	UTSW	14	66,237,470 (GRCm39)	critical splice acceptor site	probably null
R5915:Gulo	UTSW	14	66,245,570 (GRCm39)	missense	probably benign	0.29
R6328:Gulo	UTSW	14	66,240,080 (GRCm39)	missense	probably damaging	1.00
R6628:Gulo	UTSW	14	66,241,619 (GRCm39)	missense	probably benign	0.00
R7725:Gulo	UTSW	14	66,245,522 (GRCm39)	missense	probably damaging	0.99
R7935:Gulo	UTSW	14	66,237,288 (GRCm39)	missense	probably benign
R8720:Gulo	UTSW	14	66,225,074 (GRCm39)	missense	probably benign	0.01
R8940:Gulo	UTSW	14	66,235,040 (GRCm39)	missense	probably benign	0.04
R9458:Gulo	UTSW	14	66,235,043 (GRCm39)	missense	probably benign	0.01
R9716:Gulo	UTSW	14	66,234,348 (GRCm39)	missense	probably benign	0.00
R9746:Gulo	UTSW	14	66,225,630 (GRCm39)	critical splice donor site	probably null

Predicted Primers

PCR Primer
(F):5'- GGCCTATCTTGGGAAGGTCTTAC -3'
(R):5'- GCTGACACGGTAAATGCTG -3'

Sequencing Primer
(F):5'- AGACAGGGTTTCTCTGTATAGCCC -3'
(R):5'- GTAAATGCTGGGCCCCCTAAC -3'

Posted On

2014-11-11