Incidental Mutation 'R2419:Vmn1r203'
ID 249161
Institutional Source Beutler Lab
Gene Symbol Vmn1r203
Ensembl Gene ENSMUSG00000069289
Gene Name vomeronasal 1 receptor 203
Synonyms V1rh11
MMRRC Submission 040381-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.080) question?
Stock # R2419 (G1)
Quality Score 225
Status Validated
Chromosome 13
Chromosomal Location 22708221-22709156 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 22709004 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Threonine at position 262 (S262T)
Ref Sequence ENSEMBL: ENSMUSP00000154399 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000091729] [ENSMUST00000227520] [ENSMUST00000228889]
AlphaFold Q8R273
Predicted Effect
SMART Domains Protein: ENSMUSP00000089322
Gene: ENSMUSG00000069289
AA Change: S262T

DomainStartEndE-ValueType
transmembrane domain 19 41 N/A INTRINSIC
Pfam:V1R 43 304 5.8e-35 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000137651
Predicted Effect possibly damaging
Transcript: ENSMUST00000227520
AA Change: S262T

PolyPhen 2 Score 0.573 (Sensitivity: 0.88; Specificity: 0.91)
Predicted Effect possibly damaging
Transcript: ENSMUST00000228889
AA Change: S262T

PolyPhen 2 Score 0.573 (Sensitivity: 0.88; Specificity: 0.91)
Meta Mutation Damage Score 0.1795 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 94.9%
Validation Efficiency 98% (57/58)
Allele List at MGI
Other mutations in this stock
Total: 59 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca2 G A 2: 25,328,001 (GRCm39) A768T probably benign Het
Acyp2 T C 11: 30,582,316 (GRCm39) Y33C probably benign Het
Ampd3 A G 7: 110,367,576 (GRCm39) probably benign Het
Arap3 T C 18: 38,122,997 (GRCm39) D501G probably damaging Het
Arl4d A T 11: 101,557,714 (GRCm39) Q80L probably damaging Het
Bcorl1 A G X: 47,459,418 (GRCm39) T425A probably damaging Het
Ccdc38 T A 10: 93,384,837 (GRCm39) V35D probably benign Het
Cd6 G A 19: 10,770,216 (GRCm39) P492S probably damaging Het
Cdh20 G A 1: 104,902,740 (GRCm39) S477N possibly damaging Het
Cnmd G A 14: 79,875,488 (GRCm39) P311S probably damaging Het
Cnot8 G A 11: 58,006,136 (GRCm39) G222R probably damaging Het
Dnah9 A T 11: 65,986,241 (GRCm39) L1131* probably null Het
Dscc1 G A 15: 54,946,820 (GRCm39) R302* probably null Het
Dusp18 T C 11: 3,847,018 (GRCm39) S3P possibly damaging Het
Eml2 A G 7: 18,910,620 (GRCm39) probably benign Het
Foxb2 G C 19: 16,850,325 (GRCm39) A227G probably damaging Het
Hey1 A G 3: 8,731,003 (GRCm39) probably null Het
Itk A G 11: 46,229,044 (GRCm39) F379L probably damaging Het
Kcna2 G A 3: 107,011,469 (GRCm39) G17R probably benign Het
Kif7 C A 7: 79,348,441 (GRCm39) R1300L probably benign Het
Klkb1 A T 8: 45,742,149 (GRCm39) D43E possibly damaging Het
Leng9 A G 7: 4,151,626 (GRCm39) V350A probably benign Het
Lmbr1l A C 15: 98,805,418 (GRCm39) F361C possibly damaging Het
Lrat A G 3: 82,810,992 (GRCm39) S10P probably damaging Het
Lrrk2 C A 15: 91,681,729 (GRCm39) probably benign Het
Mcur1 C T 13: 43,703,013 (GRCm39) V241M possibly damaging Het
Met T C 6: 17,535,829 (GRCm39) probably benign Het
Mical3 A G 6: 120,936,884 (GRCm39) V342A probably benign Het
Nup210 G A 6: 90,994,538 (GRCm39) probably benign Het
Or1i2 T A 10: 78,448,221 (GRCm39) I85F probably benign Het
Or1j12 T A 2: 36,343,338 (GRCm39) V247E probably damaging Het
Or4c107 A G 2: 88,789,380 (GRCm39) N190S probably benign Het
Pcdhac1 T C 18: 37,224,381 (GRCm39) L398P probably benign Het
Phc3 T C 3: 31,005,027 (GRCm39) M189V probably damaging Het
Plcb1 A G 2: 135,104,020 (GRCm39) probably benign Het
Plcxd3 G T 15: 4,604,245 (GRCm39) K284N probably benign Het
Plxnb2 A G 15: 89,045,272 (GRCm39) V1058A possibly damaging Het
Rbbp5 T C 1: 132,421,564 (GRCm39) I88T possibly damaging Het
Rfpl4b T C 10: 38,697,368 (GRCm39) R78G probably benign Het
Rsf1 CG CGACGGCGGGG 7: 97,229,115 (GRCm39) probably benign Het
Samt2 A T X: 153,358,223 (GRCm39) probably null Het
Sdad1 T C 5: 92,453,677 (GRCm39) H37R possibly damaging Het
Setd2 T A 9: 110,378,065 (GRCm39) F627I possibly damaging Het
Ski A G 4: 155,245,350 (GRCm39) S293P probably benign Het
Slc27a1 A G 8: 72,032,560 (GRCm39) E191G possibly damaging Het
Snx18 T C 13: 113,753,755 (GRCm39) M393V possibly damaging Het
Spata31g1 A G 4: 42,974,146 (GRCm39) T1160A possibly damaging Het
Tacc1 A G 8: 25,672,829 (GRCm39) V42A possibly damaging Het
Tbc1d8 A G 1: 39,415,983 (GRCm39) F897L probably damaging Het
Tenm3 C T 8: 48,729,693 (GRCm39) D1438N possibly damaging Het
Tmem62 G A 2: 120,837,586 (GRCm39) G501E probably damaging Het
Tmem94 A G 11: 115,687,641 (GRCm39) K1167E probably damaging Het
Trap1 A G 16: 3,886,194 (GRCm39) S88P probably benign Het
Ugt2b38 T C 5: 87,571,591 (GRCm39) D147G probably damaging Het
Vmn1r168 A T 7: 23,240,824 (GRCm39) N227I probably benign Het
Vmn1r204 T G 13: 22,740,420 (GRCm39) L17R probably damaging Het
Zcchc14 T A 8: 122,330,675 (GRCm39) Q896L probably damaging Het
Zfp619 A G 7: 39,185,307 (GRCm39) K446E possibly damaging Het
Zpr1 T C 9: 46,187,490 (GRCm39) probably benign Het
Other mutations in Vmn1r203
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01356:Vmn1r203 APN 13 22,708,947 (GRCm39) missense probably damaging 1.00
IGL01527:Vmn1r203 APN 13 22,708,447 (GRCm39) missense possibly damaging 0.89
IGL01808:Vmn1r203 APN 13 22,708,717 (GRCm39) missense probably benign 0.02
IGL01887:Vmn1r203 APN 13 22,709,046 (GRCm39) missense probably benign 0.00
IGL02340:Vmn1r203 APN 13 22,708,997 (GRCm39) nonsense probably null
IGL02543:Vmn1r203 APN 13 22,709,074 (GRCm39) missense probably damaging 1.00
IGL02684:Vmn1r203 APN 13 22,708,539 (GRCm39) missense possibly damaging 0.95
BB005:Vmn1r203 UTSW 13 22,708,705 (GRCm39) missense probably benign 0.01
BB015:Vmn1r203 UTSW 13 22,708,705 (GRCm39) missense probably benign 0.01
PIT4519001:Vmn1r203 UTSW 13 22,708,765 (GRCm39) missense probably benign 0.01
R0544:Vmn1r203 UTSW 13 22,708,443 (GRCm39) missense possibly damaging 0.94
R1365:Vmn1r203 UTSW 13 22,708,756 (GRCm39) missense probably benign 0.00
R1396:Vmn1r203 UTSW 13 22,708,678 (GRCm39) missense probably benign 0.01
R1794:Vmn1r203 UTSW 13 22,708,521 (GRCm39) missense probably damaging 1.00
R2010:Vmn1r203 UTSW 13 22,708,617 (GRCm39) missense possibly damaging 0.56
R2169:Vmn1r203 UTSW 13 22,708,905 (GRCm39) nonsense probably null
R2333:Vmn1r203 UTSW 13 22,709,113 (GRCm39) missense probably damaging 1.00
R2418:Vmn1r203 UTSW 13 22,709,004 (GRCm39) missense possibly damaging 0.57
R4322:Vmn1r203 UTSW 13 22,708,408 (GRCm39) missense probably damaging 1.00
R4460:Vmn1r203 UTSW 13 22,708,852 (GRCm39) missense probably damaging 0.98
R4686:Vmn1r203 UTSW 13 22,708,528 (GRCm39) missense probably damaging 1.00
R5526:Vmn1r203 UTSW 13 22,708,273 (GRCm39) missense probably benign 0.01
R6240:Vmn1r203 UTSW 13 22,708,899 (GRCm39) missense possibly damaging 0.89
R6607:Vmn1r203 UTSW 13 22,708,891 (GRCm39) missense probably benign 0.23
R7575:Vmn1r203 UTSW 13 22,708,588 (GRCm39) missense probably benign 0.12
R7928:Vmn1r203 UTSW 13 22,708,705 (GRCm39) missense probably benign 0.01
R8375:Vmn1r203 UTSW 13 22,709,154 (GRCm39) makesense probably null
R8421:Vmn1r203 UTSW 13 22,709,154 (GRCm39) makesense probably null
R8424:Vmn1r203 UTSW 13 22,709,004 (GRCm39) missense probably damaging 1.00
R8845:Vmn1r203 UTSW 13 22,708,720 (GRCm39) missense possibly damaging 0.81
R8933:Vmn1r203 UTSW 13 22,708,691 (GRCm39) missense possibly damaging 0.69
R8956:Vmn1r203 UTSW 13 22,709,004 (GRCm39) missense possibly damaging 0.57
R9493:Vmn1r203 UTSW 13 22,708,423 (GRCm39) missense probably damaging 1.00
Z1177:Vmn1r203 UTSW 13 22,708,579 (GRCm39) missense probably damaging 0.97
Predicted Primers PCR Primer
(F):5'- TGGTCCTGAGAGATGCAGTG -3'
(R):5'- AGATTTCTTCGACACTTTTGGGC -3'

Sequencing Primer
(F):5'- CCTGAGAGATGCAGTGTTTCAG -3'
(R):5'- CGACACTTTTGGGCATATAAATCAG -3'
Posted On 2014-11-12