Incidental Mutation 'R0310:Cgn'
ID 25102
Institutional Source Beutler Lab
Gene Symbol Cgn
Ensembl Gene ENSMUSG00000068876
Gene Name cingulin
Synonyms 6330408J11Rik
MMRRC Submission 038520-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R0310 (G1)
Quality Score 170
Status Validated
Chromosome 3
Chromosomal Location 94667376-94693826 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 94672960 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Lysine at position 906 (R906K)
Ref Sequence ENSEMBL: ENSMUSP00000102894 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000107272] [ENSMUST00000107273]
AlphaFold no structure available at present
Predicted Effect possibly damaging
Transcript: ENSMUST00000107272
AA Change: R898K

PolyPhen 2 Score 0.486 (Sensitivity: 0.88; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000102893
Gene: ENSMUSG00000068876
AA Change: R898K

DomainStartEndE-ValueType
low complexity region 31 43 N/A INTRINSIC
low complexity region 189 198 N/A INTRINSIC
internal_repeat_1 214 229 8.06e-5 PROSPERO
low complexity region 242 260 N/A INTRINSIC
internal_repeat_1 287 302 8.06e-5 PROSPERO
low complexity region 446 462 N/A INTRINSIC
low complexity region 466 481 N/A INTRINSIC
low complexity region 536 549 N/A INTRINSIC
low complexity region 567 592 N/A INTRINSIC
low complexity region 660 676 N/A INTRINSIC
low complexity region 758 775 N/A INTRINSIC
Pfam:Myosin_tail_1 783 1140 3.4e-31 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000107273
AA Change: R906K

PolyPhen 2 Score 0.877 (Sensitivity: 0.83; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000102894
Gene: ENSMUSG00000068876
AA Change: R906K

DomainStartEndE-ValueType
low complexity region 31 43 N/A INTRINSIC
low complexity region 189 198 N/A INTRINSIC
internal_repeat_1 214 229 8.83e-5 PROSPERO
low complexity region 242 260 N/A INTRINSIC
internal_repeat_1 287 302 8.83e-5 PROSPERO
low complexity region 454 470 N/A INTRINSIC
low complexity region 474 489 N/A INTRINSIC
low complexity region 544 557 N/A INTRINSIC
low complexity region 575 600 N/A INTRINSIC
low complexity region 668 684 N/A INTRINSIC
low complexity region 766 783 N/A INTRINSIC
Pfam:Myosin_tail_1 799 1144 2.2e-37 PFAM
Meta Mutation Damage Score 0.0742 question?
Coding Region Coverage
  • 1x: 98.6%
  • 3x: 97.3%
  • 10x: 93.3%
  • 20x: 82.5%
Validation Efficiency 99% (113/114)
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit increased sensitivity to the ulcerogenic action of cysteamine. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 109 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930550C14Rik A C 9: 53,336,971 (GRCm39) T92P probably damaging Het
Abca13 T C 11: 9,243,810 (GRCm39) V1891A probably benign Het
Abcc1 T A 16: 14,228,791 (GRCm39) I346N probably damaging Het
Afdn G T 17: 14,105,770 (GRCm39) probably null Het
Ahrr G A 13: 74,431,143 (GRCm39) probably benign Het
Akap13 A G 7: 75,264,678 (GRCm39) D507G probably damaging Het
Akap8 A T 17: 32,535,234 (GRCm39) M260K possibly damaging Het
Akr1b8 T C 6: 34,342,194 (GRCm39) V265A probably benign Het
Alpk3 C G 7: 80,728,358 (GRCm39) P496R possibly damaging Het
Ankrd13b A G 11: 77,363,571 (GRCm39) V249A possibly damaging Het
Arid4a T C 12: 71,122,604 (GRCm39) V995A probably benign Het
Ascc3 G T 10: 50,625,022 (GRCm39) V1637L probably benign Het
Atad2 G A 15: 57,977,653 (GRCm39) A499V probably damaging Het
Barhl2 G T 5: 106,605,253 (GRCm39) A152E possibly damaging Het
Bbs12 T A 3: 37,375,194 (GRCm39) D547E probably damaging Het
Btaf1 A G 19: 36,981,934 (GRCm39) M1655V probably damaging Het
Ccdc50 T A 16: 27,225,408 (GRCm39) H40Q probably damaging Het
Ccr9 A T 9: 123,603,617 (GRCm39) probably benign Het
Cdh15 A G 8: 123,592,175 (GRCm39) D654G probably damaging Het
Cebpz T C 17: 79,233,553 (GRCm39) D758G probably damaging Het
Chil3 T A 3: 106,067,839 (GRCm39) M109L possibly damaging Het
Cntnap4 A T 8: 113,569,148 (GRCm39) probably null Het
Cyp4f18 C T 8: 72,754,856 (GRCm39) probably benign Het
Daam2 A G 17: 49,770,952 (GRCm39) probably null Het
Ddost T A 4: 138,037,922 (GRCm39) H220Q probably benign Het
Dennd2a C T 6: 39,441,135 (GRCm39) probably benign Het
Depdc1b G A 13: 108,510,375 (GRCm39) V296I possibly damaging Het
Dnaaf4 A T 9: 72,879,618 (GRCm39) D386V probably damaging Het
Dnah5 A T 15: 28,299,256 (GRCm39) R1539S probably benign Het
Dusp22 T C 13: 30,889,641 (GRCm39) I74T probably damaging Het
Epc1 A G 18: 6,440,202 (GRCm39) probably benign Het
Epha7 A G 4: 28,961,301 (GRCm39) I845V probably benign Het
Fanci C T 7: 79,057,165 (GRCm39) probably benign Het
Fbn1 T A 2: 125,205,564 (GRCm39) E1104V probably damaging Het
Fbxo8 T A 8: 57,043,132 (GRCm39) F205L probably damaging Het
Fcgbpl1 G T 7: 27,841,699 (GRCm39) V545L probably benign Het
Fetub T C 16: 22,748,506 (GRCm39) probably benign Het
Frs3 T C 17: 48,014,747 (GRCm39) V480A probably benign Het
Gne C A 4: 44,060,157 (GRCm39) E79* probably null Het
Hrc T A 7: 44,985,921 (GRCm39) H357Q probably benign Het
Idh1 T C 1: 65,201,079 (GRCm39) M291V probably damaging Het
Il22b T A 10: 118,129,090 (GRCm39) H133L probably benign Het
Ino80b T C 6: 83,101,072 (GRCm39) E165G probably damaging Het
Inppl1 A T 7: 101,477,706 (GRCm39) probably benign Het
Ints15 G T 5: 143,293,643 (GRCm39) T278K probably benign Het
Ip6k2 T C 9: 108,676,432 (GRCm39) probably benign Het
Itga11 A T 9: 62,667,628 (GRCm39) I654F probably damaging Het
Jag2 G T 12: 112,876,997 (GRCm39) probably benign Het
Katna1 G T 10: 7,619,513 (GRCm39) probably benign Het
Kcnh4 G T 11: 100,636,995 (GRCm39) S707Y probably benign Het
Kcnn2 T G 18: 45,693,585 (GRCm39) L387R probably damaging Het
Khnyn A G 14: 56,125,425 (GRCm39) T503A probably damaging Het
Lama5 G T 2: 179,823,359 (GRCm39) probably benign Het
Lmbr1l A T 15: 98,806,654 (GRCm39) probably benign Het
Mast4 A T 13: 102,890,669 (GRCm39) S870T possibly damaging Het
Med1 A G 11: 98,058,400 (GRCm39) Y266H probably benign Het
Med13 A T 11: 86,236,829 (GRCm39) N109K probably benign Het
Mgam T C 6: 40,737,969 (GRCm39) probably benign Het
Mmp8 A G 9: 7,561,455 (GRCm39) Q153R probably benign Het
Mpeg1 C A 19: 12,439,055 (GRCm39) T171N probably benign Het
Mtus2 T C 5: 148,043,829 (GRCm39) S806P probably benign Het
Naip2 T A 13: 100,285,350 (GRCm39) E1226V probably damaging Het
Naip6 A G 13: 100,444,721 (GRCm39) F246L possibly damaging Het
Nav3 T C 10: 109,602,989 (GRCm39) I1187V possibly damaging Het
Nbeal1 T C 1: 60,344,529 (GRCm39) probably benign Het
Nbeal2 C A 9: 110,467,231 (GRCm39) V653L probably damaging Het
Ndufa9 G T 6: 126,804,495 (GRCm39) probably benign Het
Nlrp5 G T 7: 23,129,582 (GRCm39) C883F probably damaging Het
Nr0b2 C A 4: 133,283,303 (GRCm39) probably null Het
Or1m1 T A 9: 18,666,629 (GRCm39) M101L possibly damaging Het
Or6c209 T A 10: 129,483,600 (GRCm39) V201E probably damaging Het
Or6c69c G A 10: 129,910,692 (GRCm39) V138I probably benign Het
Or8b101 T A 9: 38,020,782 (GRCm39) S267T possibly damaging Het
Pkhd1 A T 1: 20,620,046 (GRCm39) probably null Het
Pkhd1l1 A G 15: 44,386,134 (GRCm39) probably benign Het
Ppm1l A G 3: 69,456,794 (GRCm39) K237R probably benign Het
Ppp1r18 T C 17: 36,184,603 (GRCm39) probably benign Het
Ptpn3 A T 4: 57,204,958 (GRCm39) D734E probably benign Het
Pxdn T C 12: 30,065,528 (GRCm39) C1283R probably damaging Het
Rbm12 A G 2: 155,937,644 (GRCm39) probably benign Het
Rttn A T 18: 89,027,584 (GRCm39) probably benign Het
Sgsm1 G T 5: 113,411,571 (GRCm39) H431Q probably benign Het
Siah3 A G 14: 75,763,367 (GRCm39) N206S possibly damaging Het
Slc22a15 G T 3: 101,767,827 (GRCm39) D521E probably benign Het
Sprr2k A T 3: 92,340,770 (GRCm39) probably benign Het
Stab2 G A 10: 86,803,477 (GRCm39) probably benign Het
Sval3 T A 6: 41,945,120 (GRCm39) L16Q probably damaging Het
Sycp2 C G 2: 178,023,648 (GRCm39) S456T probably benign Het
Tk1 T C 11: 117,707,921 (GRCm39) probably benign Het
Tlk2 C A 11: 105,145,799 (GRCm39) A335E probably benign Het
Tmtc1 T C 6: 148,151,079 (GRCm39) K659E probably benign Het
Tnk2 C T 16: 32,499,408 (GRCm39) P907L probably benign Het
Trim14 C A 4: 46,522,043 (GRCm39) K211N probably damaging Het
Trim15 A C 17: 37,177,878 (GRCm39) L39R probably damaging Het
Tspan15 T A 10: 62,023,872 (GRCm39) T269S probably benign Het
Ttc7 T A 17: 87,669,292 (GRCm39) D646E probably benign Het
Ttll6 A T 11: 96,038,382 (GRCm39) Q410L probably benign Het
Unc79 A G 12: 103,027,666 (GRCm39) Q419R probably damaging Het
Vcam1 A T 3: 115,908,065 (GRCm39) Y666N possibly damaging Het
Vmn1r10 A T 6: 57,090,486 (GRCm39) Y26F probably damaging Het
Vmn1r80 A G 7: 11,927,775 (GRCm39) N295S probably benign Het
Vmn2r114 A T 17: 23,509,917 (GRCm39) H854Q probably benign Het
Vmn2r2 A T 3: 64,042,039 (GRCm39) D225E probably damaging Het
Vmn2r4 A T 3: 64,296,855 (GRCm39) Y643* probably null Het
Vmn2r52 T A 7: 9,893,393 (GRCm39) Y582F probably damaging Het
Vmn2r60 G T 7: 41,844,564 (GRCm39) L642F possibly damaging Het
Zbtb20 T C 16: 43,430,109 (GRCm39) S207P probably damaging Het
Zic2 CCCACCACCACCATCACCACCACCACC CCCACCATCACCACCACCACC 14: 122,713,776 (GRCm39) probably benign Het
Zkscan7 G T 9: 122,717,958 (GRCm39) E118* probably null Het
Other mutations in Cgn
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00228:Cgn APN 3 94,672,855 (GRCm39) missense probably benign 0.00
IGL00823:Cgn APN 3 94,674,519 (GRCm39) missense probably damaging 1.00
IGL01349:Cgn APN 3 94,674,486 (GRCm39) nonsense probably null
IGL01433:Cgn APN 3 94,686,769 (GRCm39) missense probably damaging 0.99
IGL01467:Cgn APN 3 94,686,898 (GRCm39) missense probably damaging 1.00
IGL01781:Cgn APN 3 94,680,515 (GRCm39) missense probably benign
IGL01789:Cgn APN 3 94,683,528 (GRCm39) missense possibly damaging 0.63
IGL01879:Cgn APN 3 94,681,674 (GRCm39) nonsense probably null
IGL02805:Cgn APN 3 94,681,687 (GRCm39) missense probably damaging 0.96
IGL02814:Cgn APN 3 94,681,550 (GRCm39) missense probably benign 0.00
IGL02926:Cgn APN 3 94,685,326 (GRCm39) missense probably benign 0.01
IGL03113:Cgn APN 3 94,686,544 (GRCm39) missense probably benign
IGL03340:Cgn APN 3 94,685,405 (GRCm39) intron probably benign
R0054:Cgn UTSW 3 94,669,899 (GRCm39) missense possibly damaging 0.95
R0355:Cgn UTSW 3 94,682,242 (GRCm39) missense probably benign
R0615:Cgn UTSW 3 94,678,024 (GRCm39) unclassified probably benign
R0656:Cgn UTSW 3 94,682,204 (GRCm39) unclassified probably benign
R1491:Cgn UTSW 3 94,670,535 (GRCm39) missense probably damaging 1.00
R1509:Cgn UTSW 3 94,681,568 (GRCm39) missense probably benign 0.00
R1794:Cgn UTSW 3 94,669,864 (GRCm39) critical splice donor site probably null
R2113:Cgn UTSW 3 94,687,116 (GRCm39) missense probably damaging 1.00
R3121:Cgn UTSW 3 94,685,792 (GRCm39) splice site probably benign
R4655:Cgn UTSW 3 94,686,559 (GRCm39) nonsense probably null
R4703:Cgn UTSW 3 94,683,405 (GRCm39) utr 3 prime probably benign
R4714:Cgn UTSW 3 94,686,748 (GRCm39) missense probably damaging 1.00
R4715:Cgn UTSW 3 94,686,748 (GRCm39) missense probably damaging 1.00
R4959:Cgn UTSW 3 94,685,564 (GRCm39) missense probably benign 0.06
R4973:Cgn UTSW 3 94,685,564 (GRCm39) missense probably benign 0.06
R4995:Cgn UTSW 3 94,687,246 (GRCm39) missense probably damaging 1.00
R5011:Cgn UTSW 3 94,683,455 (GRCm39) missense probably null 1.00
R5329:Cgn UTSW 3 94,687,300 (GRCm39) start codon destroyed probably null 0.02
R5524:Cgn UTSW 3 94,687,299 (GRCm39) start codon destroyed probably null 0.56
R5695:Cgn UTSW 3 94,680,945 (GRCm39) missense probably benign 0.00
R5839:Cgn UTSW 3 94,681,703 (GRCm39) missense probably damaging 0.99
R5987:Cgn UTSW 3 94,686,832 (GRCm39) missense probably benign 0.00
R6146:Cgn UTSW 3 94,674,435 (GRCm39) missense possibly damaging 0.94
R6311:Cgn UTSW 3 94,685,486 (GRCm39) intron probably benign
R6948:Cgn UTSW 3 94,680,531 (GRCm39) missense probably benign 0.06
R7038:Cgn UTSW 3 94,670,392 (GRCm39) missense possibly damaging 0.80
R7231:Cgn UTSW 3 94,680,502 (GRCm39) missense probably damaging 0.99
R7251:Cgn UTSW 3 94,683,509 (GRCm39) missense possibly damaging 0.82
R7408:Cgn UTSW 3 94,670,362 (GRCm39) nonsense probably null
R7828:Cgn UTSW 3 94,676,489 (GRCm39) missense probably damaging 0.97
R7882:Cgn UTSW 3 94,669,941 (GRCm39) missense probably damaging 1.00
R7975:Cgn UTSW 3 94,671,836 (GRCm39) missense probably benign 0.03
R8082:Cgn UTSW 3 94,670,368 (GRCm39) missense probably benign 0.21
R8090:Cgn UTSW 3 94,687,263 (GRCm39) missense probably damaging 1.00
R8128:Cgn UTSW 3 94,676,691 (GRCm39) missense probably benign 0.06
R8275:Cgn UTSW 3 94,682,263 (GRCm39) missense possibly damaging 0.52
R8774:Cgn UTSW 3 94,680,810 (GRCm39) missense probably damaging 1.00
R8774-TAIL:Cgn UTSW 3 94,680,810 (GRCm39) missense probably damaging 1.00
R9036:Cgn UTSW 3 94,674,551 (GRCm39) missense possibly damaging 0.90
R9060:Cgn UTSW 3 94,687,165 (GRCm39) missense probably damaging 1.00
R9434:Cgn UTSW 3 94,672,837 (GRCm39) missense probably damaging 0.99
R9616:Cgn UTSW 3 94,670,332 (GRCm39) missense probably damaging 0.97
R9720:Cgn UTSW 3 94,686,621 (GRCm39) missense probably benign 0.10
Z1176:Cgn UTSW 3 94,683,488 (GRCm39) missense probably benign 0.16
Z1176:Cgn UTSW 3 94,681,656 (GRCm39) missense probably damaging 1.00
Z1176:Cgn UTSW 3 94,681,583 (GRCm39) missense possibly damaging 0.81
Predicted Primers PCR Primer
(F):5'- GCGGCTTTACCTCTAGGCTCTTCA -3'
(R):5'- GCAGCATCCATCTCTAGAACGGCA -3'

Sequencing Primer
(F):5'- AGCTGTCGAGCCTTGTCG -3'
(R):5'- agattgtgtgcctgtctcc -3'
Posted On 2013-04-16