Mutagenetix > Incidental Mutation

Incidental Mutation 'R2513:Pik3cb'

253637

Institutional Source

Beutler Lab

Gene Symbol

Pik3cb

Ensembl Gene

ENSMUSG00000032462

Gene Name

phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta

Synonyms

1110001J02Rik, p110beta

MMRRC Submission

040419-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.967) question?

Stock #

R2513 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

98920455-99022264 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to C at 98943895 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Tryptophan at position 636 (L636W)

Ref Sequence

ENSEMBL: ENSMUSP00000035037 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000035037] [ENSMUST00000136965]

AlphaFold

Q8BTI9

PDB Structure

CRYSTAL STRUCTURE OF P110BETA IN COMPLEX WITH ICSH2 OF P85BETA AND THE DRUG GDC-0941 [X-RAY DIFFRACTION]
Discovery and Optimization of Pyrimidone Indoline Amide PI3Kbeta Inhibitors for the Treatment of Phosphatase and TENsin homologue (PTEN)-Deficient Cancers [X-RAY DIFFRACTION]

Predicted Effect

probably damaging
Transcript: ENSMUST00000035037
AA Change: L636W

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000035037
Gene: ENSMUSG00000032462
AA Change: L636W

Domain	Start	End	E-Value	Type
PI3K_p85B	35	112	2.44e-50	SMART
PI3K_rbd	174	282	1.88e-42	SMART
low complexity region	305	311	N/A	INTRINSIC
PI3K_C2	315	417	4.64e-33	SMART
PI3Ka	519	705	1.08e-92	SMART
PI3Kc	795	1061	8.75e-134	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000136965

SMART Domains

Protein: ENSMUSP00000138346
Gene: ENSMUSG00000032462

Domain	Start	End	E-Value	Type
PI3K_p85B	35	112	2.44e-50	SMART
PI3K_rbd	174	282	1.88e-42	SMART
low complexity region	305	311	N/A	INTRINSIC
PI3K_C2	315	417	4.64e-33	SMART
Blast:PI3Ka	450	520	1e-37	BLAST

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.4%
20x: 95.4%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an isoform of the catalytic subunit of phosphoinositide 3-kinase (PI3K). These kinases are important in signaling pathways involving receptors on the outer membrane of eukaryotic cells and are named for their catalytic subunit. The encoded protein is the catalytic subunit for PI3Kbeta (PI3KB). PI3KB has been shown to be part of the activation pathway in neutrophils which have bound immune complexes at sites of injury or infection. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2011]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit 30% fetal lethality, decreased size at birth and postnatally, abnormal glucose homeostasis, and dyslipidemia. Mice homozygous for a different knock-out allele die prior to E8.5 [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 90 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
3425401B19Rik	T	C	14: 32,383,809 (GRCm39)	T719A	possibly damaging	Het
Abcc1	A	G	16: 14,290,873 (GRCm39)		probably null	Het
Aftph	C	T	11: 20,658,676 (GRCm39)		probably null	Het
Als2	C	A	1: 59,254,276 (GRCm39)	K360N	probably benign	Het
Atg2a	T	A	19: 6,308,076 (GRCm39)		probably null	Het
Axl	T	C	7: 25,486,941 (GRCm39)	D22G	probably benign	Het
Baiap2	G	A	11: 119,890,052 (GRCm39)	A438T	probably benign	Het
Bean1	G	C	8: 104,908,643 (GRCm39)	A7P	probably benign	Het
Birc6	C	G	17: 74,954,724 (GRCm39)	P3431R	probably damaging	Het
Camk1d	A	G	2: 5,719,047 (GRCm39)	M1T	probably null	Het
Carmil3	T	C	14: 55,741,295 (GRCm39)	Y1027H	probably damaging	Het
Ccdc6	G	A	10: 70,023,658 (GRCm39)		probably benign	Het
Cemip	C	A	7: 83,591,233 (GRCm39)	V1280L	probably benign	Het
Cfap58	C	A	19: 47,950,981 (GRCm39)	N447K	probably benign	Het
Chd3	A	G	11: 69,251,471 (GRCm39)	L520P	probably damaging	Het
Col1a2	T	A	6: 4,531,223 (GRCm39)		probably null	Het
Cpne7	A	C	8: 123,844,406 (GRCm39)		probably null	Het
Ctla4	T	C	1: 60,951,723 (GRCm39)	V84A	probably damaging	Het
Dap3	A	G	3: 88,835,565 (GRCm39)	V263A	probably benign	Het
Dhx57	T	A	17: 80,549,378 (GRCm39)		probably null	Het
Dlg5	C	A	14: 24,214,593 (GRCm39)	K663N	probably damaging	Het
Dsg3	C	A	18: 20,656,719 (GRCm39)	F196L	possibly damaging	Het
Eif2ak4	C	A	2: 118,257,064 (GRCm39)	D402E	probably damaging	Het
Fance	T	C	17: 28,537,068 (GRCm39)	V24A	probably benign	Het
Fasn	A	T	11: 120,705,574 (GRCm39)	L1149Q	probably damaging	Het
Fcgbpl1	C	G	7: 27,831,060 (GRCm39)	S91C	probably damaging	Het
Flg	T	A	3: 93,187,093 (GRCm39)	S182T	possibly damaging	Het
Gm128	T	A	3: 95,147,293 (GRCm39)	S334C	possibly damaging	Het
Gm3727	A	C	14: 7,264,561 (GRCm38)	H31Q	probably damaging	Het
Gm4841	T	G	18: 60,403,977 (GRCm39)	T39P	probably damaging	Het
Golgb1	G	T	16: 36,735,513 (GRCm39)	V1587L	possibly damaging	Het
Golm1	G	A	13: 59,790,072 (GRCm39)	P243S	probably benign	Het
Gstcd	C	A	3: 132,788,081 (GRCm39)	A206S	possibly damaging	Het
Gstcd	C	A	3: 132,788,082 (GRCm39)	K205N	possibly damaging	Het
Gtf3c1	A	G	7: 125,280,345 (GRCm39)	V355A	probably benign	Het
Hhatl	T	C	9: 121,618,236 (GRCm39)	D173G	probably benign	Het
Kcnu1	T	A	8: 26,395,994 (GRCm39)	C660S	probably benign	Het
Kctd8	T	C	5: 69,267,988 (GRCm39)	D374G	probably benign	Het
Kif21a	T	C	15: 90,878,594 (GRCm39)	I229V	possibly damaging	Het
L3mbtl1	A	T	2: 162,809,505 (GRCm39)	I702F	probably benign	Het
Lce1d	T	C	3: 92,593,066 (GRCm39)		probably benign	Het
Lrig1	C	T	6: 94,594,347 (GRCm39)		probably null	Het
Lrp12	A	T	15: 39,739,507 (GRCm39)	D563E	probably damaging	Het
Lrp2	C	T	2: 69,336,718 (GRCm39)		probably null	Het
Map3k5	G	A	10: 19,970,201 (GRCm39)	V703I	possibly damaging	Het
Mecr	A	G	4: 131,581,076 (GRCm39)	R110G	probably benign	Het
Mtrr	T	A	13: 68,715,092 (GRCm39)	K445*	probably null	Het
Nanos1	T	A	19: 60,744,990 (GRCm39)	L96Q	probably benign	Het
Or13a24	T	G	7: 140,154,069 (GRCm39)	M1R	probably null	Het
Or51t4	T	A	7: 102,598,700 (GRCm39)	F333I	probably benign	Het
Or6c214	T	A	10: 129,591,021 (GRCm39)	L99F	probably damaging	Het
Otog	T	C	7: 45,955,014 (GRCm39)		probably null	Het
Pcdhb3	G	T	18: 37,434,294 (GRCm39)	V87F	probably benign	Het
Pcdhb3	T	A	18: 37,434,292 (GRCm39)	L86*	probably null	Het
Pcdhb3	A	T	18: 37,434,293 (GRCm39)	L86F	probably damaging	Het
Pdgfd	A	G	9: 6,359,894 (GRCm39)	K322E	probably damaging	Het
Picalm	T	C	7: 89,846,217 (GRCm39)	S648P	probably damaging	Het
Pigr	T	C	1: 130,774,357 (GRCm39)	S446P	possibly damaging	Het
Pla2g2f	A	T	4: 138,481,473 (GRCm39)	L92Q	probably damaging	Het
Plod3	G	C	5: 137,017,000 (GRCm39)	A50P	probably benign	Het
Prkar2b	C	T	12: 32,025,928 (GRCm39)	V191I	possibly damaging	Het
Prune1	C	A	3: 95,165,430 (GRCm39)	A281S	probably benign	Het
Ptges3l	A	T	11: 101,314,868 (GRCm39)	C42S	possibly damaging	Het
Reg3b	A	T	6: 78,348,802 (GRCm39)	I33L	probably benign	Het
Rel	A	G	11: 23,695,823 (GRCm39)	I188T	probably damaging	Het
Rif1	GCCACCA	GCCA	2: 52,000,336 (GRCm39)		probably benign	Het
Ripor1	G	T	8: 106,344,254 (GRCm39)	V463L	probably benign	Het
Rrm1	T	A	7: 102,109,896 (GRCm39)	D510E	probably damaging	Het
Setd7	A	G	3: 51,440,436 (GRCm39)	S202P	probably damaging	Het
Shank3	T	A	15: 89,432,889 (GRCm39)	D1211E	probably benign	Het
Slc30a1	A	T	1: 191,639,674 (GRCm39)	T186S	possibly damaging	Het
Slc4a4	G	A	5: 89,304,257 (GRCm39)	V523I	probably benign	Het
Slc9a2	T	A	1: 40,781,768 (GRCm39)		probably null	Het
Smg6	A	G	11: 74,820,502 (GRCm39)	T258A	probably damaging	Het
Sptlc1	C	T	13: 53,491,676 (GRCm39)	D408N	possibly damaging	Het
Tasor2	G	T	13: 3,632,150 (GRCm39)	L784I	possibly damaging	Het
Tbl3	T	C	17: 24,923,524 (GRCm39)		probably null	Het
Tdo2	T	C	3: 81,876,812 (GRCm39)	D139G	possibly damaging	Het
Ticam1	T	A	17: 56,578,612 (GRCm39)	H161L	possibly damaging	Het
Tnfaip3	T	A	10: 18,881,407 (GRCm39)	D293V	probably benign	Het
Trim72	G	A	7: 127,603,878 (GRCm39)	V75M	possibly damaging	Het
Trip11	T	A	12: 101,803,986 (GRCm39)	N1632I	possibly damaging	Het
Tspan18	A	T	2: 93,050,440 (GRCm39)	M61K	possibly damaging	Het
Tuba8	A	T	6: 121,202,932 (GRCm39)	E415V	probably damaging	Het
Ung	A	G	5: 114,275,253 (GRCm39)	H214R	probably benign	Het
Uqcrc1	T	C	9: 108,765,836 (GRCm39)	L17P	probably damaging	Het
Usp24	A	G	4: 106,236,602 (GRCm39)		probably null	Het
Vps39	A	C	2: 120,169,268 (GRCm39)	Y245D	probably damaging	Het
Whrn	T	A	4: 63,353,649 (GRCm39)	T373S	probably benign	Het
Zc2hc1a	C	T	3: 7,581,596 (GRCm39)		probably null	Het

Other mutations in Pik3cb

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00933:Pik3cb	APN	9	98,983,339 (GRCm39)	missense	probably damaging	0.96
IGL01354:Pik3cb	APN	9	98,946,221 (GRCm39)	missense	possibly damaging	0.83
IGL02132:Pik3cb	APN	9	98,953,430 (GRCm39)	missense	probably benign	0.01
IGL02268:Pik3cb	APN	9	98,928,609 (GRCm39)	missense	probably benign	0.00
IGL02376:Pik3cb	APN	9	98,934,405 (GRCm39)	missense	probably benign	0.00
IGL02378:Pik3cb	APN	9	98,944,893 (GRCm39)	missense	probably benign	0.40
IGL02748:Pik3cb	APN	9	98,945,021 (GRCm39)	splice site	probably benign
IGL03038:Pik3cb	APN	9	98,947,650 (GRCm39)	missense	probably damaging	1.00
IGL03142:Pik3cb	APN	9	98,947,615 (GRCm39)	missense	probably benign	0.10
H8786:Pik3cb	UTSW	9	98,928,612 (GRCm39)	missense	possibly damaging	0.80
R0071:Pik3cb	UTSW	9	98,926,918 (GRCm39)	missense	probably benign	0.02
R0071:Pik3cb	UTSW	9	98,926,918 (GRCm39)	missense	probably benign	0.02
R0305:Pik3cb	UTSW	9	98,946,129 (GRCm39)	missense	possibly damaging	0.86
R0464:Pik3cb	UTSW	9	98,926,796 (GRCm39)	critical splice donor site	probably null
R0635:Pik3cb	UTSW	9	98,946,271 (GRCm39)	splice site	probably benign
R1386:Pik3cb	UTSW	9	98,946,080 (GRCm39)	missense	possibly damaging	0.90
R1530:Pik3cb	UTSW	9	98,936,026 (GRCm39)	missense	probably damaging	0.96
R1802:Pik3cb	UTSW	9	98,983,342 (GRCm39)	nonsense	probably null
R1815:Pik3cb	UTSW	9	98,975,148 (GRCm39)	missense	possibly damaging	0.93
R2011:Pik3cb	UTSW	9	98,987,632 (GRCm39)	nonsense	probably null
R2079:Pik3cb	UTSW	9	98,942,257 (GRCm39)	missense	probably benign	0.27
R2153:Pik3cb	UTSW	9	98,983,297 (GRCm39)	nonsense	probably null
R2237:Pik3cb	UTSW	9	98,923,081 (GRCm39)	missense	probably damaging	1.00
R2238:Pik3cb	UTSW	9	98,923,081 (GRCm39)	missense	probably damaging	1.00
R3982:Pik3cb	UTSW	9	98,928,654 (GRCm39)	missense	probably benign	0.06
R4009:Pik3cb	UTSW	9	98,922,982 (GRCm39)	missense	probably damaging	0.98
R4246:Pik3cb	UTSW	9	98,983,229 (GRCm39)	splice site	probably null
R4248:Pik3cb	UTSW	9	98,983,229 (GRCm39)	splice site	probably null
R4249:Pik3cb	UTSW	9	98,983,229 (GRCm39)	splice site	probably null
R4334:Pik3cb	UTSW	9	98,943,904 (GRCm39)	missense	probably damaging	1.00
R4544:Pik3cb	UTSW	9	98,921,812 (GRCm39)	missense	probably damaging	1.00
R4568:Pik3cb	UTSW	9	98,972,355 (GRCm39)	missense	probably benign	0.00
R4571:Pik3cb	UTSW	9	98,972,310 (GRCm39)	missense	possibly damaging	0.94
R4595:Pik3cb	UTSW	9	98,937,459 (GRCm39)	missense	possibly damaging	0.95
R4599:Pik3cb	UTSW	9	98,943,817 (GRCm39)	missense	probably benign	0.15
R4820:Pik3cb	UTSW	9	98,955,679 (GRCm39)	missense	probably benign	0.00
R4887:Pik3cb	UTSW	9	98,983,381 (GRCm39)	missense	probably damaging	0.99
R4967:Pik3cb	UTSW	9	98,987,685 (GRCm39)	missense	probably benign	0.14
R5029:Pik3cb	UTSW	9	98,936,113 (GRCm39)	missense	probably damaging	0.98
R5031:Pik3cb	UTSW	9	98,953,461 (GRCm39)	missense	probably damaging	1.00
R5394:Pik3cb	UTSW	9	98,970,716 (GRCm39)	missense	probably benign
R5769:Pik3cb	UTSW	9	98,975,212 (GRCm39)	nonsense	probably null
R6128:Pik3cb	UTSW	9	98,946,152 (GRCm39)	missense	possibly damaging	0.95
R6250:Pik3cb	UTSW	9	98,976,651 (GRCm39)	missense	probably benign	0.01
R6354:Pik3cb	UTSW	9	98,955,696 (GRCm39)	missense	probably benign	0.00
R6370:Pik3cb	UTSW	9	98,922,987 (GRCm39)	missense	probably damaging	1.00
R6664:Pik3cb	UTSW	9	98,976,591 (GRCm39)	missense	possibly damaging	0.56
R6665:Pik3cb	UTSW	9	98,955,702 (GRCm39)	missense	probably benign	0.00
R6751:Pik3cb	UTSW	9	98,976,574 (GRCm39)	missense	probably benign
R6781:Pik3cb	UTSW	9	98,923,045 (GRCm39)	missense	possibly damaging	0.52
R6869:Pik3cb	UTSW	9	98,942,312 (GRCm39)	missense	probably benign	0.08
R6883:Pik3cb	UTSW	9	98,983,453 (GRCm39)	missense	probably benign	0.00
R7150:Pik3cb	UTSW	9	98,975,143 (GRCm39)	missense	probably damaging	1.00
R7446:Pik3cb	UTSW	9	98,928,711 (GRCm39)	missense	probably damaging	1.00
R7679:Pik3cb	UTSW	9	98,970,660 (GRCm39)	missense	probably benign	0.05
R7831:Pik3cb	UTSW	9	98,970,666 (GRCm39)	missense	probably benign
R8300:Pik3cb	UTSW	9	98,928,711 (GRCm39)	missense	probably damaging	1.00
R8837:Pik3cb	UTSW	9	98,936,117 (GRCm39)	missense	possibly damaging	0.65
R8911:Pik3cb	UTSW	9	98,946,201 (GRCm39)	missense	probably benign	0.40
R9299:Pik3cb	UTSW	9	98,943,844 (GRCm39)	missense	probably damaging	1.00
R9337:Pik3cb	UTSW	9	98,943,844 (GRCm39)	missense	probably damaging	1.00
R9477:Pik3cb	UTSW	9	98,922,973 (GRCm39)	critical splice donor site	probably null
R9641:Pik3cb	UTSW	9	98,955,789 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- TGGATCAGAAAGCACCTGG -3'
(R):5'- TAATCACGTGGTACAGCGAATG -3'

Sequencing Primer
(F):5'- CTGTCTGACATCACACCGGGTTAG -3'
(R):5'- TGTAAGCACATGACAGGCCTG -3'

Posted On

2014-12-04