Mutagenetix > Incidental Mutations

Incidental Mutation 'R2518:Tmem63b'

254132

Institutional Source

Beutler Lab

Gene Symbol

Tmem63b

Ensembl Gene

ENSMUSG00000036026

Gene Name

transmembrane protein 63b

Synonyms

MMRRC Submission

040422-MU

Accession Numbers

Is this an essential gene?

Essential (E-score: 1.000) question?

Stock #

R2518 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

45660171-45686905 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 45666154 bp

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 429 (I429T)

Ref Sequence

ENSEMBL: ENSMUSP00000109151 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000113523] [ENSMUST00000145873] [ENSMUST00000156254]

Predicted Effect

probably benign
Transcript: ENSMUST00000113523
AA Change: I429T

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000109151
Gene: ENSMUSG00000036026
AA Change: I429T

Domain	Start	End	E-Value	Type
transmembrane domain	40	62	N/A	INTRINSIC
low complexity region	82	92	N/A	INTRINSIC
Pfam:RSN1_TM	101	226	2.5e-23	PFAM
Pfam:PHM7_cyt	274	344	9.1e-10	PFAM
Pfam:RSN1_7TM	362	706	5.3e-96	PFAM
transmembrane domain	711	733	N/A	INTRINSIC
low complexity region	778	805	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000129177

Predicted Effect

probably benign
Transcript: ENSMUST00000145873

SMART Domains

Protein: ENSMUSP00000121681
Gene: ENSMUSG00000036026

Domain	Start	End	E-Value	Type
transmembrane domain	40	62	N/A	INTRINSIC
Pfam:RSN1_TM	87	213	1.1e-24	PFAM
Blast:RRM	228	308	3e-23	BLAST

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000151439

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000156224

Predicted Effect

probably benign
Transcript: ENSMUST00000156254

SMART Domains

Protein: ENSMUSP00000118838
Gene: ENSMUSG00000036026

Domain	Start	End	E-Value	Type
transmembrane domain	40	62	N/A	INTRINSIC
low complexity region	82	92	N/A	INTRINSIC
Pfam:RSN1_TM	102	226	3.3e-24	PFAM

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.2%
20x: 94.7%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1110034G24Rik	T	A	2: 132,750,527	S165T	probably damaging	Het
Adam18	A	G	8: 24,637,141	C480R	probably damaging	Het
Aftph	G	T	11: 20,725,797	T604K	probably damaging	Het
Bivm	T	C	1: 44,129,615	V279A	probably damaging	Het
C2cd2	G	A	16: 97,922,086	T77I	probably benign	Het
Ccdc146	T	C	5: 21,305,528	H527R	probably benign	Het
Cd226	A	G	18: 89,207,327	N116S	probably benign	Het
Cit	A	G	5: 115,987,046	K1612E	probably damaging	Het
Cmtr1	T	A	17: 29,681,980	Y663*	probably null	Het
Col3a1	T	A	1: 45,337,512		probably benign	Het
Copa	A	G	1: 172,119,901	N1095D	probably benign	Het
Cpne1	G	T	2: 156,073,971	A433E	probably damaging	Het
Cyfip1	C	T	7: 55,928,284	L1181F	probably damaging	Het
Dnajc6	T	A	4: 101,612,930	I220N	probably damaging	Het
Duxbl1	G	C	14: 25,987,748		probably benign	Het
Fam135b	C	T	15: 71,463,911	R478H	probably benign	Het
Fam91a1	T	A	15: 58,450,600	S734T	possibly damaging	Het
Fut10	T	G	8: 31,236,467	S417A	probably benign	Het
Gm9945	C	T	11: 53,480,336		probably benign	Het
Golga4	A	G	9: 118,556,612	E934G	probably damaging	Het
Gpat2	G	A	2: 127,428,291	V75M	probably damaging	Het
Hdac5	A	G	11: 102,197,136	V949A	probably damaging	Het
Hdgfl1	G	T	13: 26,769,749	L114I	probably benign	Het
Ifi27l2b	T	A	12: 103,455,824	M94L	unknown	Het
Irs2	C	A	8: 11,005,352	A1027S	probably benign	Het
Itga2	A	T	13: 114,881,042	C111S	probably damaging	Het
Khdrbs1	T	C	4: 129,720,747	T338A	probably benign	Het
Klk1	T	C	7: 44,220,737		probably null	Het
Kmt2b	T	C	7: 30,576,068	N1822S	probably benign	Het
Lrig3	T	C	10: 125,994,441	I136T	probably benign	Het
Lyar	T	A	5: 38,227,932	D105E	probably benign	Het
Mat1a	T	A	14: 41,122,512	D366E	probably benign	Het
Mrc2	G	A	11: 105,348,431		probably null	Het
Naip1	A	T	13: 100,423,219	D1092E	probably benign	Het
Neb	T	A	2: 52,249,511	K95*	probably null	Het
Nectin4	A	G	1: 171,380,208	D56G	probably benign	Het
Nupl1	A	T	14: 60,232,660	F334Y	probably damaging	Het
Olfr1502	A	G	19: 13,862,309	N172S	probably damaging	Het
Olfr294	A	T	7: 86,616,187	F153I	probably benign	Het
Pde8a	C	A	7: 81,317,422	T437K	probably benign	Het
Ppp1r3a	A	T	6: 14,719,378	N512K	possibly damaging	Het
Pqlc2	A	G	4: 139,302,499	F74L	probably damaging	Het
Pramef8	A	G	4: 143,417,903	Q273R	possibly damaging	Het
Rad51ap2	A	G	12: 11,457,067	D330G	probably damaging	Het
Ren1	G	A	1: 133,360,124	A399T	probably damaging	Het
Rnft2	G	T	5: 118,194,605		probably benign	Het
Sept14	A	T	5: 129,699,035	S27T	probably benign	Het
Shox2	T	C	3: 66,978,359	K128E	possibly damaging	Het
Skint1	T	C	4: 112,025,481	W241R	probably benign	Het
Slc24a4	T	A	12: 102,222,051	H134Q	probably benign	Het
Slc25a36	A	T	9: 97,079,071	L165Q	possibly damaging	Het
Slc35f1	A	G	10: 53,073,534	I240V	probably benign	Het
Tab2	G	A	10: 7,907,481	P679L	probably damaging	Het
Tarbp2	A	G	15: 102,518,557	E3G	possibly damaging	Het
Tas2r130	A	T	6: 131,630,073	I253K	probably damaging	Het
Timm44	A	C	8: 4,266,588	C319G	probably null	Het
Tjap1	A	T	17: 46,260,095	N165K	probably damaging	Het
Trabd2b	A	T	4: 114,599,903	D339V	probably damaging	Het
Tst	T	C	15: 78,405,833	M1V	probably null	Het
Ube4a	A	T	9: 44,948,137	N335K	probably benign	Het
Vps54	C	T	11: 21,306,394	T633M	probably benign	Het
Zfhx4	C	T	3: 5,403,358	P2859S	probably benign	Het
Zfp953	A	G	13: 67,347,939	Y13H	probably damaging	Het

Other mutations in Tmem63b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01681:Tmem63b	APN	17	45663571	missense	probably damaging	1.00
IGL02486:Tmem63b	APN	17	45673983	missense	probably damaging	0.97
IGL02519:Tmem63b	APN	17	45665208	missense	possibly damaging	0.46
IGL02893:Tmem63b	APN	17	45661900	missense	probably damaging	1.00
IGL03137:Tmem63b	APN	17	45664995	missense	probably damaging	0.98
R0211:Tmem63b	UTSW	17	45661913	missense	probably benign	0.00
R0211:Tmem63b	UTSW	17	45661913	missense	probably benign	0.00
R0276:Tmem63b	UTSW	17	45675373	splice site	probably benign
R0441:Tmem63b	UTSW	17	45666315	critical splice donor site	probably null
R0729:Tmem63b	UTSW	17	45674134	missense	probably damaging	1.00
R0749:Tmem63b	UTSW	17	45666115	missense	possibly damaging	0.89
R0834:Tmem63b	UTSW	17	45660944	missense	possibly damaging	0.93
R0835:Tmem63b	UTSW	17	45660944	missense	possibly damaging	0.93
R0865:Tmem63b	UTSW	17	45661519	missense	probably benign	0.02
R1144:Tmem63b	UTSW	17	45666427	missense	probably benign	0.07
R1448:Tmem63b	UTSW	17	45678978	missense	possibly damaging	0.89
R1468:Tmem63b	UTSW	17	45678978	missense	possibly damaging	0.89
R1468:Tmem63b	UTSW	17	45678978	missense	possibly damaging	0.89
R1538:Tmem63b	UTSW	17	45678978	missense	possibly damaging	0.89
R1853:Tmem63b	UTSW	17	45661297	missense	possibly damaging	0.68
R1935:Tmem63b	UTSW	17	45678961	critical splice donor site	probably null
R2078:Tmem63b	UTSW	17	45663536	missense	possibly damaging	0.91
R3911:Tmem63b	UTSW	17	45677958	missense	probably damaging	1.00
R5093:Tmem63b	UTSW	17	45660874	missense	probably damaging	1.00
R5186:Tmem63b	UTSW	17	45661477	missense	possibly damaging	0.68
R5364:Tmem63b	UTSW	17	45664727	unclassified	probably benign
R5396:Tmem63b	UTSW	17	45669962	missense	possibly damaging	0.72
R5548:Tmem63b	UTSW	17	45664958	missense	probably damaging	0.98
R5582:Tmem63b	UTSW	17	45667763	missense	probably benign
R5998:Tmem63b	UTSW	17	45670000	missense	possibly damaging	0.94
R6198:Tmem63b	UTSW	17	45661516	missense	probably benign	0.00
R6656:Tmem63b	UTSW	17	45667708	missense	probably benign
R6808:Tmem63b	UTSW	17	45660808	missense	probably benign	0.13
R6967:Tmem63b	UTSW	17	45666632	missense	probably benign	0.00
R7089:Tmem63b	UTSW	17	45667783	missense	probably benign	0.00
R7181:Tmem63b	UTSW	17	45673168	missense	probably benign	0.00
R7214:Tmem63b	UTSW	17	45661822	missense	probably benign	0.02
R7267:Tmem63b	UTSW	17	45666122	missense	probably benign
R7323:Tmem63b	UTSW	17	45660847	missense	possibly damaging	0.86
R7346:Tmem63b	UTSW	17	45666591	missense	probably benign
R8281:Tmem63b	UTSW	17	45660796	missense	probably benign	0.23

Predicted Primers

PCR Primer
(F):5'- GCACCCAGAGCTATGTTAGG -3'
(R):5'- TGACCCTCAGAACATCTATTGGTG -3'

Sequencing Primer
(F):5'- CACCCAGAGCTATGTTAGGGATGAG -3'
(R):5'- ACATCTATTGGTGAGCCACAG -3'

Posted On

2014-12-04