Mutagenetix > Incidental Mutation

Incidental Mutation 'R2568:Apoh'

254646

Institutional Source

Beutler Lab

Gene Symbol

Apoh

Ensembl Gene

ENSMUSG00000000049

Gene Name

apolipoprotein H

Synonyms

beta-2-GPI, beta-2-glycoprotein 1, B2GPI

MMRRC Submission

040427-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.380) question?

Stock #

R2568 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

108343354-108414396 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to G at 108404871 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glutamic Acid at position 133 (D133E)

Ref Sequence

ENSEMBL: ENSMUSP00000114214 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000000049] [ENSMUST00000152958]

AlphaFold

Q01339

Predicted Effect

probably benign
Transcript: ENSMUST00000000049
AA Change: D133E

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000000049
Gene: ENSMUSG00000000049
AA Change: D133E

Domain	Start	End	E-Value	Type
signal peptide	1	19	N/A	INTRINSIC
CCP	23	79	1.35e-7	SMART
CCP	84	137	2.53e-12	SMART
CCP	142	200	4.92e-10	SMART
CCP	205	260	1.98e-14	SMART
CCP	264	325	2.51e1	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000152958
AA Change: D133E

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000114214
Gene: ENSMUSG00000000049
AA Change: D133E

Domain	Start	End	E-Value	Type
signal peptide	1	19	N/A	INTRINSIC
CCP	23	79	1.35e-7	SMART
CCP	84	137	2.53e-12	SMART

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 97.0%
20x: 94.1%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Apolipoprotein H has been implicated in a variety of physiologic pathways including lipoprotein metabolism, coagulation, and the production of antiphospholipid autoantibodies. APOH may be a required cofactor for anionic phospholipid binding by the antiphospholipid autoantibodies found in sera of many patients with lupus and primary antiphospholipid syndrome, but it does not seem to be required for the reactivity of antiphospholipid autoantibodies associated with infections. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygous mutation of this gene results in reduced viability and reduced thrombin production. Only 8% homozygous null animals are born from heterozygous intercrosses. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2410089E03Rik	T	C	15: 8,201,269 (GRCm38)	V1010A	possibly damaging	Het
4930563D23Rik	A	G	16: 92,321,319 (GRCm38)	L27P	probably damaging	Het
A730071L15Rik	A	T	11: 6,200,161 (GRCm38)		probably benign	Het
Abca13	A	T	11: 9,333,310 (GRCm38)	N3244I	probably benign	Het
Adgrf5	A	G	17: 43,437,671 (GRCm38)	T219A	probably damaging	Het
Adgrg5	A	T	8: 94,934,021 (GRCm38)	N92I	probably damaging	Het
Agt	A	C	8: 124,556,955 (GRCm38)	V475G	probably damaging	Het
Akap6	A	G	12: 52,887,278 (GRCm38)	K518E	possibly damaging	Het
Axdnd1	T	A	1: 156,392,749 (GRCm38)	M234L	possibly damaging	Het
Cacna1d	A	G	14: 30,082,511 (GRCm38)	I1335T	probably damaging	Het
Cdh15	G	A	8: 122,862,024 (GRCm38)	R279Q	probably damaging	Het
Cfap206	T	A	4: 34,711,566 (GRCm38)	K444*	probably null	Het
Clasp2	A	G	9: 113,878,764 (GRCm38)	I614M	probably benign	Het
Col6a4	A	T	9: 106,063,076 (GRCm38)	D1218E	possibly damaging	Het
Csmd3	CCTTTGCGCTT	CCTT	15: 47,741,236 (GRCm38)		probably null	Het
D130043K22Rik	C	T	13: 24,883,891 (GRCm38)	T870M	probably damaging	Het
Dagla	C	A	19: 10,248,152 (GRCm38)	A883S	probably benign	Het
Dhx30	A	G	9: 110,097,195 (GRCm38)	V87A	probably damaging	Het
Dtx1	C	A	5: 120,710,184 (GRCm38)	V44L	possibly damaging	Het
Ecm2	T	A	13: 49,530,129 (GRCm38)	S528T	possibly damaging	Het
Egfem1	A	T	3: 29,582,931 (GRCm38)	N172I	probably damaging	Het
Fam102b	T	A	3: 108,978,848 (GRCm38)	N356I	probably benign	Het
Fam13a	T	G	6: 58,935,609 (GRCm38)	R686S	probably damaging	Het
Fmo1	T	A	1: 162,836,259 (GRCm38)	I234L	probably benign	Het
Foxj2	C	T	6: 122,828,372 (GRCm38)	R68W	probably damaging	Het
Foxo6	A	T	4: 120,268,764 (GRCm38)	M278K	probably benign	Het
Fsip2	A	G	2: 82,990,431 (GRCm38)	S5503G	probably benign	Het
Gdf5	C	G	2: 155,942,090 (GRCm38)	R100G	probably benign	Het
Il1b	A	T	2: 129,367,322 (GRCm38)	D129E	probably damaging	Het
Klhl29	A	G	12: 5,091,350 (GRCm38)	S545P	probably damaging	Het
Krt83	G	T	15: 101,487,827 (GRCm38)	R296S	possibly damaging	Het
Llgl1	T	G	11: 60,708,812 (GRCm38)	S509R	probably damaging	Het
Lmod1	A	T	1: 135,363,964 (GRCm38)	K186*	probably null	Het
Lrpprc	C	T	17: 84,726,649 (GRCm38)	A973T	probably damaging	Het
Marco	T	C	1: 120,494,785 (GRCm38)	H49R	possibly damaging	Het
Mylk4	T	C	13: 32,722,018 (GRCm38)	N394S	probably null	Het
Myo5a	A	G	9: 75,123,040 (GRCm38)	Y147C	probably damaging	Het
Myo5a	T	C	9: 75,151,897 (GRCm38)	V469A	probably damaging	Het
Myot	A	G	18: 44,337,216 (GRCm38)	T87A	probably benign	Het
Nav2	A	G	7: 49,597,564 (GRCm38)	H2154R	probably damaging	Het
Nek10	A	G	14: 14,999,112 (GRCm38)	E1037G	possibly damaging	Het
Olfr181	A	G	16: 58,925,923 (GRCm38)	V216A	probably benign	Het
Olfr341	T	C	2: 36,479,974 (GRCm38)	D52G	probably damaging	Het
Olfr677	A	G	7: 105,056,671 (GRCm38)	T142A	probably benign	Het
Pitrm1	G	T	13: 6,575,092 (GRCm38)	V869F	probably benign	Het
Plekhm3	CCTGCTGCTGCTGCTGCTGCTGCTGC	CCTGCTGCTGCTGCTGCTGCTGC	1: 64,937,781 (GRCm38)		probably benign	Het
Prdx1	T	G	4: 116,693,800 (GRCm38)	I156S	probably benign	Het
Rbks	T	A	5: 31,665,752 (GRCm38)	T107S	probably damaging	Het
Ryr3	G	A	2: 112,675,874 (GRCm38)	R3468W	probably damaging	Het
Scn1a	C	T	2: 66,273,469 (GRCm38)	D1805N	probably damaging	Het
Sirpa	T	C	2: 129,615,648 (GRCm38)	V214A	probably benign	Het
Slc35c1	T	C	2: 92,458,880 (GRCm38)	N94D	probably benign	Het
Sorbs2	A	T	8: 45,795,370 (GRCm38)	K553*	probably null	Het
Tectb	C	G	19: 55,180,999 (GRCm38)		probably benign	Het
Thg1l	A	G	11: 45,951,565 (GRCm38)	V142A	probably benign	Het
Tiparp	T	A	3: 65,553,130 (GRCm38)	Y513*	probably null	Het
Tmc6	A	G	11: 117,772,820 (GRCm38)	V522A	probably benign	Het
Trim39	T	A	17: 36,269,164 (GRCm38)		probably benign	Het
Trrap	G	A	5: 144,843,369 (GRCm38)		probably null	Het
Tulp3	C	T	6: 128,327,638 (GRCm38)	V218I	probably benign	Het
Vmn1r38	T	A	6: 66,776,971 (GRCm38)	I54F	probably benign	Het
Vmn2r23	T	A	6: 123,742,188 (GRCm38)	Y833*	probably null	Het
Zfp810	A	T	9: 22,279,238 (GRCm38)	S125T	probably benign	Het

Other mutations in Apoh

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00090:Apoh	APN	11	108,395,834 (GRCm38)	missense	probably benign	0.45
IGL01327:Apoh	APN	11	108,397,361 (GRCm38)	missense	probably damaging	1.00
IGL01353:Apoh	APN	11	108,397,385 (GRCm38)	missense	probably damaging	1.00
IGL01464:Apoh	APN	11	108,395,890 (GRCm38)	missense	probably damaging	1.00
IGL02065:Apoh	APN	11	108,414,305 (GRCm38)	utr 3 prime	probably benign
IGL02646:Apoh	APN	11	108,412,142 (GRCm38)	missense	probably benign	0.15
R0125:Apoh	UTSW	11	108,412,073 (GRCm38)	missense	probably damaging	1.00
R0359:Apoh	UTSW	11	108,397,373 (GRCm38)	missense	probably damaging	1.00
R1969:Apoh	UTSW	11	108,407,462 (GRCm38)	missense	probably benign	0.00
R2280:Apoh	UTSW	11	108,409,180 (GRCm38)	nonsense	probably null
R4369:Apoh	UTSW	11	108,397,379 (GRCm38)	missense	probably damaging	1.00
R4789:Apoh	UTSW	11	108,409,238 (GRCm38)	missense	probably damaging	1.00
R4824:Apoh	UTSW	11	108,414,261 (GRCm38)	missense	probably benign	0.37
R4937:Apoh	UTSW	11	108,407,378 (GRCm38)	missense	probably benign	0.19
R5634:Apoh	UTSW	11	108,412,049 (GRCm38)	missense	probably damaging	1.00
R5900:Apoh	UTSW	11	108,412,017 (GRCm38)	missense	probably damaging	0.99
R5951:Apoh	UTSW	11	108,395,903 (GRCm38)	missense	probably damaging	1.00
R6054:Apoh	UTSW	11	108,395,975 (GRCm38)	missense	probably damaging	1.00
R6126:Apoh	UTSW	11	108,397,373 (GRCm38)	missense	probably damaging	1.00
R7343:Apoh	UTSW	11	108,395,848 (GRCm38)	missense	probably benign	0.14
R7471:Apoh	UTSW	11	108,407,305 (GRCm38)	missense	probably damaging	1.00
R8557:Apoh	UTSW	11	108,409,236 (GRCm38)	missense	probably damaging	0.99
R9310:Apoh	UTSW	11	108,407,481 (GRCm38)	critical splice donor site	probably null
R9671:Apoh	UTSW	11	108,395,966 (GRCm38)	nonsense	probably null
X0065:Apoh	UTSW	11	108,395,350 (GRCm38)	missense	probably damaging	1.00
Z1176:Apoh	UTSW	11	108,343,459 (GRCm38)	start gained	probably benign

Predicted Primers

PCR Primer
(F):5'- GGACCTCAGTAGTAGAATTCATGTC -3'
(R):5'- AGATACTGTGCCTGGCTTGG -3'

Sequencing Primer
(F):5'- CTTCTACATGTAAGTTCAGTCCCTAG -3'
(R):5'- CTCCCTAGCATGACAAGAAGG -3'

Posted On

2014-12-04