Incidental Mutation 'R2914:Vmn1r65'
ID 254803
Institutional Source Beutler Lab
Gene Symbol Vmn1r65
Ensembl Gene ENSMUSG00000066850
Gene Name vomeronasal 1 receptor 65
Synonyms V1rd6, V3R6
MMRRC Submission 040501-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.056) question?
Stock # R2914 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 6010749-6014009 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 6012040 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Phenylalanine at position 65 (I65F)
Ref Sequence ENSEMBL: ENSMUSP00000083520 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000086338]
AlphaFold Q9EPS7
Predicted Effect possibly damaging
Transcript: ENSMUST00000086338
AA Change: I65F

PolyPhen 2 Score 0.690 (Sensitivity: 0.86; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000083520
Gene: ENSMUSG00000066850
AA Change: I65F

DomainStartEndE-ValueType
Pfam:TAS2R 20 308 7.3e-14 PFAM
Pfam:7tm_1 42 301 1.6e-6 PFAM
Pfam:V1R 53 308 5.6e-15 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000227656
Meta Mutation Damage Score 0.1795 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.4%
  • 20x: 95.5%
Validation Efficiency 100% (41/41)
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adgrf3 A G 5: 30,401,992 (GRCm39) S679P probably damaging Het
Cd109 CATTTATTTATTTATTTATTTATTTATTTATTTAT CATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 9: 78,619,782 (GRCm39) probably benign Het
Cryl1 T C 14: 57,513,375 (GRCm39) E282G probably benign Het
Dbn1 A G 13: 55,630,234 (GRCm39) F45L probably damaging Het
Dclre1b T C 3: 103,715,430 (GRCm39) M105V probably damaging Het
Defb12 T C 8: 19,164,830 (GRCm39) N3D probably benign Het
Eprs1 G A 1: 185,111,939 (GRCm39) probably null Het
Fa2h T C 8: 112,120,281 (GRCm39) D35G probably damaging Het
Fdxacb1 C T 9: 50,679,699 (GRCm39) A39V probably benign Het
Fras1 G A 5: 96,881,774 (GRCm39) R2502K probably benign Het
Grm1 A G 10: 10,955,601 (GRCm39) S228P probably benign Het
Il27ra T A 8: 84,758,242 (GRCm39) probably benign Het
Lrrtm1 A T 6: 77,221,962 (GRCm39) Q473L probably damaging Het
Macf1 T A 4: 123,369,704 (GRCm39) I121F probably damaging Het
Mael A T 1: 166,054,179 (GRCm39) F188I probably damaging Het
Mapk4 C T 18: 74,068,236 (GRCm39) A232T probably benign Het
Mrpl9 C A 3: 94,351,108 (GRCm39) T96K probably damaging Het
Musk C A 4: 58,366,938 (GRCm39) L511I probably damaging Het
Mutyh G A 4: 116,672,826 (GRCm39) D60N probably damaging Het
Nckap5 A T 1: 125,954,274 (GRCm39) probably null Het
Nktr T C 9: 121,578,670 (GRCm39) probably benign Het
Otud7b C A 3: 96,063,272 (GRCm39) A837E probably benign Het
Pigb A T 9: 72,947,060 (GRCm39) probably null Het
Pip4k2b G T 11: 97,613,260 (GRCm39) N245K probably benign Het
Ptprd T A 4: 75,865,338 (GRCm39) D1464V probably damaging Het
Rab22a A G 2: 173,537,074 (GRCm39) N98S probably benign Het
Rictor G T 15: 6,799,476 (GRCm39) probably null Het
Rims1 T C 1: 22,844,711 (GRCm39) E32G probably damaging Het
Slx4ip A G 2: 136,909,511 (GRCm39) probably null Het
Snx19 G A 9: 30,344,828 (GRCm39) probably benign Het
Snx29 C T 16: 11,265,317 (GRCm39) R516W probably damaging Het
Tcof1 T C 18: 60,949,156 (GRCm39) D1253G possibly damaging Het
Tmod1 A T 4: 46,092,259 (GRCm39) N203I probably damaging Het
Tmprss15 T C 16: 78,759,078 (GRCm39) N880S probably benign Het
Ttn A T 2: 76,599,979 (GRCm39) I19065N probably damaging Het
Txk T C 5: 72,881,794 (GRCm39) N154S probably damaging Het
Utp20 A G 10: 88,590,337 (GRCm39) probably null Het
Yes1 T C 5: 32,797,926 (GRCm39) S82P probably benign Het
Other mutations in Vmn1r65
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01636:Vmn1r65 APN 7 6,011,720 (GRCm39) missense probably benign 0.12
IGL02821:Vmn1r65 APN 7 6,011,893 (GRCm39) missense possibly damaging 0.62
R0991:Vmn1r65 UTSW 7 6,012,076 (GRCm39) missense probably damaging 0.99
R1457:Vmn1r65 UTSW 7 6,012,156 (GRCm39) missense probably benign 0.10
R1507:Vmn1r65 UTSW 7 6,012,108 (GRCm39) missense probably benign 0.13
R1856:Vmn1r65 UTSW 7 6,011,265 (GRCm39) missense possibly damaging 0.93
R5147:Vmn1r65 UTSW 7 6,011,818 (GRCm39) missense probably benign 0.01
R5279:Vmn1r65 UTSW 7 6,011,754 (GRCm39) missense probably damaging 1.00
R5399:Vmn1r65 UTSW 7 6,011,809 (GRCm39) nonsense probably null
R5409:Vmn1r65 UTSW 7 6,012,012 (GRCm39) missense possibly damaging 0.77
R5646:Vmn1r65 UTSW 7 6,012,223 (GRCm39) missense probably benign 0.01
R5963:Vmn1r65 UTSW 7 6,011,608 (GRCm39) missense probably damaging 1.00
R6034:Vmn1r65 UTSW 7 6,011,868 (GRCm39) missense probably damaging 1.00
R6034:Vmn1r65 UTSW 7 6,011,868 (GRCm39) missense probably damaging 1.00
R6327:Vmn1r65 UTSW 7 6,011,651 (GRCm39) missense possibly damaging 0.48
R7958:Vmn1r65 UTSW 7 6,011,254 (GRCm39) missense probably benign 0.01
R8121:Vmn1r65 UTSW 7 6,011,464 (GRCm39) missense possibly damaging 0.87
R8345:Vmn1r65 UTSW 7 6,011,256 (GRCm39) missense probably benign
R8725:Vmn1r65 UTSW 7 6,011,503 (GRCm39) missense probably damaging 1.00
R8727:Vmn1r65 UTSW 7 6,011,503 (GRCm39) missense probably damaging 1.00
R9246:Vmn1r65 UTSW 7 6,011,769 (GRCm39) missense possibly damaging 0.95
R9279:Vmn1r65 UTSW 7 6,011,988 (GRCm39) missense probably benign 0.06
R9778:Vmn1r65 UTSW 7 6,011,387 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- TCTGAAGATGACCCTAGCCCAG -3'
(R):5'- TGAAGCCATCTCCACGTTGTC -3'

Sequencing Primer
(F):5'- TGACAAACTGGTAGGTGCTG -3'
(R):5'- GAATTCTGGGCAACATCC -3'
Posted On 2014-12-29