Mutagenetix > Incidental Mutation

Incidental Mutation 'R1813:Gm10717'

257010

Institutional Source

Beutler Lab

Gene Symbol

Gm10717

Ensembl Gene

ENSMUSG00000095891

Gene Name

predicted gene 10717

Synonyms

MMRRC Submission

039841-MU

Accession Numbers

Is this an essential gene?

Probably essential (E-score: 0.856) question?

Stock #

R1813 (G1)

Quality Score

Status

Validated

Chromosome

Chromosomal Location

3025417-3033289 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to G at 3026317 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Cysteine at position 205 (F205C)

Ref Sequence

ENSEMBL: ENSMUSP00000096644 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000075573] [ENSMUST00000099042] [ENSMUST00000099046] [ENSMUST00000099047] [ENSMUST00000099051] [ENSMUST00000177601] [ENSMUST00000177875] [ENSMUST00000179264] [ENSMUST00000179982]

AlphaFold

D3Z1I8

Predicted Effect

probably damaging
Transcript: ENSMUST00000075573
AA Change: F205C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000096644
Gene: ENSMUSG00000095891
AA Change: F205C

Domain	Start	End	E-Value	Type
internal_repeat_1	1	41	1.06e-10	PROSPERO
transmembrane domain	68	90	N/A	INTRINSIC
internal_repeat_1	118	177	1.06e-10	PROSPERO
transmembrane domain	200	222	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000099042

SMART Domains

Protein: ENSMUSP00000096640
Gene: ENSMUSG00000095891

Domain	Start	End	E-Value	Type
internal_repeat_1	1	47	9.09e-8	PROSPERO
transmembrane domain	76	98	N/A	INTRINSIC
internal_repeat_1	117	164	9.09e-8	PROSPERO
transmembrane domain	195	217	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000099046

SMART Domains

Protein: ENSMUSP00000096645
Gene: ENSMUSG00000095186

Domain	Start	End	E-Value	Type
internal_repeat_1	1	41	4.44e-7	PROSPERO
transmembrane domain	67	89	N/A	INTRINSIC
internal_repeat_1	117	177	4.44e-7	PROSPERO
transmembrane domain	197	219	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000099047

SMART Domains

Protein: ENSMUSP00000096646
Gene: ENSMUSG00000095547

Domain	Start	End	E-Value	Type
internal_repeat_1	1	40	1.58e-10	PROSPERO
transmembrane domain	53	72	N/A	INTRINSIC
transmembrane domain	77	99	N/A	INTRINSIC
internal_repeat_1	117	176	1.58e-10	PROSPERO
transmembrane domain	199	221	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000099051

SMART Domains

Protein: ENSMUSP00000096650
Gene: ENSMUSG00000095891

Domain	Start	End	E-Value	Type
internal_repeat_1	2	38	6.22e-5	PROSPERO
transmembrane domain	58	80	N/A	INTRINSIC
transmembrane domain	90	109	N/A	INTRINSIC
internal_repeat_1	118	174	6.22e-5	PROSPERO
transmembrane domain	185	207	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000177601
AA Change: S55A

PolyPhen 2 Score 0.039 (Sensitivity: 0.94; Specificity: 0.83)

SMART Domains

Protein: ENSMUSP00000136755
Gene: ENSMUSG00000095891
AA Change: S55A

Domain	Start	End	E-Value	Type
internal_repeat_2	1	24	2.26e-6	PROSPERO
internal_repeat_1	2	37	2.26e-6	PROSPERO
internal_repeat_1	40	95	2.26e-6	PROSPERO
internal_repeat_2	118	142	2.26e-6	PROSPERO
low complexity region	147	159	N/A	INTRINSIC
low complexity region	169	183	N/A	INTRINSIC
transmembrane domain	186	208	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000177875

SMART Domains

Protein: ENSMUSP00000137419
Gene: ENSMUSG00000095891

Domain	Start	End	E-Value	Type
internal_repeat_1	1	49	1.49e-11	PROSPERO
transmembrane domain	68	90	N/A	INTRINSIC
internal_repeat_1	118	186	1.49e-11	PROSPERO
transmembrane domain	197	219	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000179264

SMART Domains

Protein: ENSMUSP00000137451
Gene: ENSMUSG00000095891

Domain	Start	End	E-Value	Type
internal_repeat_1	1	43	5.09e-6	PROSPERO
transmembrane domain	69	91	N/A	INTRINSIC
internal_repeat_1	117	179	5.09e-6	PROSPERO
transmembrane domain	196	218	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000179982

SMART Domains

Protein: ENSMUSP00000136365
Gene: ENSMUSG00000095891

Domain	Start	End	E-Value	Type
internal_repeat_1	1	35	7.76e-13	PROSPERO
transmembrane domain	67	89	N/A	INTRINSIC
internal_repeat_1	117	152	7.76e-13	PROSPERO
low complexity region	157	169	N/A	INTRINSIC
transmembrane domain	198	220	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000181572

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000181957

Meta Mutation Damage Score

0.6467

Coding Region Coverage

1x: 97.5%
3x: 96.8%
10x: 94.8%
20x: 90.3%

Validation Efficiency

96% (79/82)

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A2ml1	T	A	6: 128,566,273	N595Y	probably benign	Het
Abca6	A	G	11: 110,233,845		probably benign	Het
Abo	C	A	2: 26,843,597	D199Y	probably damaging	Het
Acvr1c	A	C	2: 58,280,294	V277G	probably damaging	Het
Adam23	G	A	1: 63,545,572	A380T	probably benign	Het
Art2b	A	G	7: 101,580,029	V221A	probably benign	Het
Bcam	A	G	7: 19,766,715	S153P	probably damaging	Het
Brip1	T	C	11: 86,187,080	H174R	possibly damaging	Het
Ccdc186	T	C	19: 56,800,169	D536G	probably benign	Het
Cd109	A	G	9: 78,617,005	N67S	probably benign	Het
Cd8a	G	T	6: 71,373,963	M137I	possibly damaging	Het
Ces2g	T	C	8: 104,966,937	F417L	probably benign	Het
Clec2g	A	G	6: 128,948,697	N23S	unknown	Het
Cntnap2	T	C	6: 46,530,633	Y61C	probably damaging	Het
Cog3	T	A	14: 75,742,344	E182D	probably benign	Het
Dbpht2	A	G	12: 74,295,850		noncoding transcript	Het
Dock4	A	T	12: 40,636,228	N154I	probably damaging	Het
Dysf	T	G	6: 84,151,924	V1422G	possibly damaging	Het
E2f3	T	C	13: 29,920,176	D140G	probably damaging	Het
Epb41l2	T	A	10: 25,441,568		probably null	Het
Epha2	A	G	4: 141,308,546	K98E	possibly damaging	Het
Esyt1	T	C	10: 128,519,618	D444G	probably benign	Het
Fam163a	T	C	1: 156,080,041	T2A	probably damaging	Het
Foxp2	A	T	6: 15,379,768		probably benign	Het
Gcm2	T	C	13: 41,105,891	H34R	probably benign	Het
Gipr	A	G	7: 19,164,071	S79P	probably benign	Het
Gli3	T	C	13: 15,648,691	S333P	probably damaging	Het
Gm11639	A	G	11: 104,720,688	K452R	probably benign	Het
Gzmk	A	G	13: 113,172,893	S208P	probably damaging	Het
Htra2	G	T	6: 83,051,602	A318D	probably damaging	Het
Itpkc	T	C	7: 27,208,380	D633G	probably damaging	Het
Lama1	G	A	17: 67,791,223	R1805H	probably benign	Het
Lama4	T	A	10: 39,033,125		probably benign	Het
Lama4	T	C	10: 39,060,186	V619A	probably damaging	Het
Notch3	T	C	17: 32,143,428	T1408A	probably benign	Het
Nwd2	A	G	5: 63,805,410	D779G	probably benign	Het
Nxpe4	A	G	9: 48,393,378	Y255C	possibly damaging	Het
Obox6	A	T	7: 15,834,845	H35Q	possibly damaging	Het
Olfr324	A	G	11: 58,598,307	I304V	probably damaging	Het
Olfr890	T	A	9: 38,143,729	I198N	possibly damaging	Het
Pkig	T	A	2: 163,721,227	I26N	possibly damaging	Het
Plekhm2	C	T	4: 141,642,439	V82M	possibly damaging	Het
Plppr2	G	A	9: 21,947,924	A446T	probably damaging	Het
Psme4	T	A	11: 30,804,353	F203L	probably benign	Het
Sh3bp1	A	G	15: 78,903,680	K137E	probably damaging	Het
Shisa5	T	A	9: 109,056,040	I126N	probably damaging	Het
Slc11a1	T	C	1: 74,375,772	L21P	probably benign	Het
Slc35f1	C	T	10: 52,933,195	P93S	probably damaging	Het
Slc4a4	A	G	5: 89,046,308	T172A	probably damaging	Het
Slc9c1	A	T	16: 45,573,347	Y551F	probably benign	Het
Spata31	T	C	13: 64,921,798	S587P	probably benign	Het
Syna	C	A	5: 134,559,152	M314I	probably benign	Het
Taf5l	A	G	8: 124,003,413	L144P	probably damaging	Het
Tbccd1	T	C	16: 22,822,521	T369A	probably benign	Het
Tnfrsf11b	A	T	15: 54,256,097	C160*	probably null	Het
Trim45	A	G	3: 100,922,967	N19S	probably benign	Het
Uba2	A	G	7: 34,151,030	F364S	probably damaging	Het
Unc50	T	A	1: 37,437,242	L161Q	probably damaging	Het
Uso1	A	T	5: 92,201,133		probably null	Het
Usp25	A	G	16: 77,114,950	I956V	probably benign	Het
Utf1	C	A	7: 139,944,300	L143I	probably damaging	Het
Vmn1r158	C	T	7: 22,790,718	C22Y	probably damaging	Het
Vmn1r36	T	A	6: 66,716,772	M40L	probably benign	Het
Vmn2r43	A	G	7: 8,255,056	V386A	possibly damaging	Het
Vps9d1	C	A	8: 123,247,039	R335L	probably damaging	Het
Wasf1	T	A	10: 40,926,589	V80D	probably damaging	Het
Wdr72	G	A	9: 74,276,016	V1077I	possibly damaging	Het
Wnt8a	A	G	18: 34,542,369	M1V	probably null	Het
Zbtb26	A	G	2: 37,436,335	S230P	possibly damaging	Het
Zfp335	A	G	2: 164,892,605	V1247A	probably damaging	Het
Zfp429	T	C	13: 67,390,386	N313S	possibly damaging	Het
Zfp74	A	T	7: 29,935,144	C380S	probably damaging	Het
Zfyve21	G	A	12: 111,824,894	E134K	probably damaging	Het
Zmynd11	T	C	13: 9,689,580	T474A	possibly damaging	Het

Other mutations in Gm10717

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01635:Gm10717	APN	9	3025511	missense	probably damaging	1.00
IGL01635:Gm10717	APN	9	3025506	missense	possibly damaging	0.46
IGL01864:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01865:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01865:Gm10717	APN	9	3026287	missense	probably damaging	0.98
IGL01866:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01873:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01875:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01877:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01877:Gm10717	APN	9	3026287	missense	probably damaging	0.98
IGL01878:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01879:Gm10717	APN	9	3026287	missense	probably damaging	0.98
IGL01880:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01882:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01886:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01887:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01892:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01893:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01897:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01901:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01903:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01904:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01907:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01907:Gm10717	APN	9	3026287	missense	probably damaging	0.98
IGL01908:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01913:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01919:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01920:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01923:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01925:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01927:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01930:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01931:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01932:Gm10717	APN	9	3026287	missense	probably damaging	0.98
IGL01935:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01941:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01948:Gm10717	APN	9	3025819	missense	probably damaging	1.00
IGL01949:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01951:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL01952:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL02106:Gm10717	APN	9	3026287	missense	probably damaging	0.98
IGL02142:Gm10717	APN	9	3025616	missense	probably benign	0.00
IGL02592:Gm10717	APN	9	3026287	missense	probably damaging	0.98
IGL02609:Gm10717	APN	9	3026287	missense	probably damaging	0.98
IGL02802:Gm10717	UTSW	9	3031999	missense	probably benign
R0277:Gm10717	UTSW	9	3025619	missense	possibly damaging	0.79
R1911:Gm10717	UTSW	9	3026317	missense	probably damaging	1.00
R2399:Gm10717	UTSW	9	3025532	missense	probably benign
R2874:Gm10717	UTSW	9	3025532	missense	probably benign
R3617:Gm10717	UTSW	9	3025532	missense	probably benign
R3720:Gm10717	UTSW	9	3025532	missense	probably benign
R4988:Gm10717	UTSW	9	3026368	missense	probably benign	0.00
R5002:Gm10717	UTSW	9	3025532	missense	probably benign
R5117:Gm10717	UTSW	9	3025625	missense	probably benign	0.00
R5367:Gm10717	UTSW	9	3026317	missense	probably damaging	1.00
R5539:Gm10717	UTSW	9	3030438	missense	probably damaging	1.00
R5623:Gm10717	UTSW	9	3026318	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- ACAGTGGACATTTCTAAATTTTCCAC -3'
(R):5'- GAAATGCACACTGTAGGACCT -3'

Sequencing Primer
(F):5'- GCTATATTCCAAGTCCTACAGTGTG -3'
(R):5'- TGCACACTGTAGGACCTGGAATATG -3'

Posted On

2015-01-07