Incidental Mutation 'R0325:Ddx60'
ID 25734
Institutional Source Beutler Lab
Gene Symbol Ddx60
Ensembl Gene ENSMUSG00000037921
Gene Name DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
Synonyms
MMRRC Submission 038535-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.145) question?
Stock # R0325 (G1)
Quality Score 225
Status Not validated
Chromosome 8
Chromosomal Location 61928087-62038244 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) A to T at 61983855 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Aspartic acid at position 946 (E946D)
Ref Sequence ENSEMBL: ENSMUSP00000091197 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000070631] [ENSMUST00000093485]
AlphaFold E9PZQ1
Predicted Effect probably benign
Transcript: ENSMUST00000070631
AA Change: E945D

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
SMART Domains Protein: ENSMUSP00000070741
Gene: ENSMUSG00000037921
AA Change: E945D

DomainStartEndE-ValueType
low complexity region 99 110 N/A INTRINSIC
low complexity region 364 376 N/A INTRINSIC
DEXDc 758 949 1.05e-15 SMART
Blast:DEXDc 1007 1132 4e-24 BLAST
HELICc 1245 1328 4.35e-13 SMART
low complexity region 1362 1373 N/A INTRINSIC
Blast:DEXDc 1503 1584 1e-20 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000093485
AA Change: E946D

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
SMART Domains Protein: ENSMUSP00000091197
Gene: ENSMUSG00000037921
AA Change: E946D

DomainStartEndE-ValueType
low complexity region 99 110 N/A INTRINSIC
low complexity region 364 376 N/A INTRINSIC
DEXDc 759 950 1.05e-15 SMART
Blast:DEXDc 1008 1133 4e-24 BLAST
HELICc 1246 1329 4.35e-13 SMART
low complexity region 1363 1374 N/A INTRINSIC
Blast:DEXDc 1504 1585 1e-20 BLAST
Predicted Effect noncoding transcript
Transcript: ENSMUST00000153806
Coding Region Coverage
  • 1x: 99.0%
  • 3x: 98.1%
  • 10x: 95.9%
  • 20x: 92.0%
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit normal immunity to several viruses (IAV, EMCV, SINV) but increased susceptibility to VSV infection. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 103 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4931408C20Rik G T 1: 26,685,266 (GRCm38) Q278K possibly damaging Het
4933416C03Rik T C 10: 116,113,569 (GRCm38) I17M probably damaging Het
5330417C22Rik A G 3: 108,461,251 (GRCm38) L808P probably damaging Het
Adcyap1 A G 17: 93,202,832 (GRCm38) D96G probably benign Het
Adgrv1 C T 13: 81,540,015 (GRCm38) V1749M probably damaging Het
Adnp2 A T 18: 80,130,653 (GRCm38) N180K probably benign Het
Ahdc1 G T 4: 133,062,719 (GRCm38) A424S unknown Het
Alpk3 G A 7: 81,067,953 (GRCm38) R86H possibly damaging Het
Atf7ip A C 6: 136,560,989 (GRCm38) T49P possibly damaging Het
Atp7b G A 8: 22,028,451 (GRCm38) L124F probably benign Het
Bub1 A T 2: 127,801,394 (GRCm38) L1010* probably null Het
Cd300c C A 11: 114,959,585 (GRCm38) E131* probably null Het
Cep135 A G 5: 76,615,743 (GRCm38) K527E probably damaging Het
Cfd G T 10: 79,891,758 (GRCm38) E89* probably null Het
Crb1 A C 1: 139,241,166 (GRCm38) C871W probably damaging Het
D6Ertd527e A T 6: 87,111,295 (GRCm38) S147C unknown Het
Dmrt1 G A 19: 25,546,007 (GRCm38) E241K probably benign Het
Dnah11 C G 12: 118,012,339 (GRCm38) V2782L probably benign Het
Dzip1 T C 14: 118,909,557 (GRCm38) I313M probably damaging Het
Egln3 T C 12: 54,203,512 (GRCm38) E17G probably benign Het
Eif3d A G 15: 77,968,220 (GRCm38) V42A probably damaging Het
Eogt C A 6: 97,113,955 (GRCm38) G408W probably damaging Het
Fip1l1 T A 5: 74,595,842 (GRCm38) N498K probably damaging Het
Fmn2 T A 1: 174,609,954 (GRCm38) probably null Het
Fndc3b T C 3: 27,467,430 (GRCm38) E532G probably damaging Het
Gabrb3 T C 7: 57,765,530 (GRCm38) L116P probably damaging Het
Galnt6 A T 15: 100,693,471 (GRCm38) probably null Het
Glmp G A 3: 88,325,084 (GRCm38) M1I probably null Het
Gm13101 A T 4: 143,966,740 (GRCm38) V56E probably damaging Het
Gm13124 T C 4: 144,555,511 (GRCm38) Y237C probably damaging Het
Gm5478 T C 15: 101,644,326 (GRCm38) D79G probably damaging Het
Gnb1 T G 4: 155,551,683 (GRCm38) D153E probably benign Het
Grik2 T C 10: 49,240,725 (GRCm38) I86V probably damaging Het
Hdac3 C T 18: 37,940,952 (GRCm38) probably null Het
Hdgfl2 G A 17: 56,099,181 (GRCm38) R523H possibly damaging Het
Ifngr1 T A 10: 19,597,432 (GRCm38) N43K probably damaging Het
Iqgap1 A G 7: 80,751,930 (GRCm38) W476R probably benign Het
Jag1 A G 2: 137,095,445 (GRCm38) probably null Het
Kars T C 8: 112,008,216 (GRCm38) D46G probably benign Het
Kcnd2 A G 6: 21,216,683 (GRCm38) I129V probably damaging Het
Lama3 A C 18: 12,482,126 (GRCm38) D1369A probably damaging Het
Lars A T 18: 42,250,902 (GRCm38) V76E possibly damaging Het
Lgals9 T C 11: 78,963,448 (GRCm38) I337V probably damaging Het
Lrp1b T C 2: 40,851,711 (GRCm38) D3068G probably damaging Het
Med12l A G 3: 59,077,059 (GRCm38) T462A possibly damaging Het
Megf9 T A 4: 70,455,941 (GRCm38) D286V probably damaging Het
Meox1 T A 11: 101,879,401 (GRCm38) S167C probably damaging Het
Mier2 C T 10: 79,542,596 (GRCm38) probably null Het
Mrps2 C A 2: 28,469,779 (GRCm38) T216K probably damaging Het
Mto1 A T 9: 78,453,004 (GRCm38) D258V probably damaging Het
Mug1 A T 6: 121,849,842 (GRCm38) H208L probably benign Het
Myo15b T A 11: 115,884,265 (GRCm38) I751N probably damaging Het
Napg C T 18: 62,986,963 (GRCm38) R149C probably damaging Het
Ndrg4 T A 8: 95,710,935 (GRCm38) M17K probably damaging Het
Nfrkb T G 9: 31,414,180 (GRCm38) M973R probably benign Het
Nxph4 C T 10: 127,526,911 (GRCm38) R37H probably damaging Het
Oas1e A G 5: 120,795,395 (GRCm38) I35T probably damaging Het
Oc90 C T 15: 65,897,665 (GRCm38) probably null Het
Olfr1045 G A 2: 86,198,711 (GRCm38) L14F possibly damaging Het
Olfr1076 A T 2: 86,509,205 (GRCm38) T249S probably benign Het
Olfr1271 A T 2: 90,265,536 (GRCm38) M298K probably null Het
Olfr461 A T 6: 40,544,123 (GRCm38) N285K possibly damaging Het
Olfr653 A T 7: 104,580,360 (GRCm38) D238V probably damaging Het
Papola T A 12: 105,807,193 (GRCm38) I157N probably damaging Het
Pcyox1l G C 18: 61,697,893 (GRCm38) P303A possibly damaging Het
Pkdrej T C 15: 85,819,551 (GRCm38) N728S probably benign Het
Pkp4 A G 2: 59,318,529 (GRCm38) D542G probably damaging Het
Pla2g5 C T 4: 138,800,656 (GRCm38) D100N probably benign Het
Poln C T 5: 34,149,764 (GRCm38) R31H probably benign Het
Ppp3ca G A 3: 136,935,139 (GRCm38) A484T probably benign Het
Prag1 A G 8: 36,103,804 (GRCm38) T514A probably benign Het
Prex2 G A 1: 11,200,057 (GRCm38) probably null Het
Prrc2b G T 2: 32,199,091 (GRCm38) W403L probably damaging Het
Pter A T 2: 13,000,937 (GRCm38) K307M probably damaging Het
Ptpn5 G A 7: 47,090,758 (GRCm38) S99L probably benign Het
Ptpn5 A C 7: 47,090,759 (GRCm38) S99A probably benign Het
Rpap1 A C 2: 119,771,840 (GRCm38) H674Q probably benign Het
Rph3a A T 5: 120,943,064 (GRCm38) D623E probably benign Het
Sdr9c7 G T 10: 127,898,719 (GRCm38) E25D probably benign Het
Sept9 T G 11: 117,356,632 (GRCm38) V479G probably damaging Het
Sgo2a A G 1: 58,016,697 (GRCm38) D680G probably benign Het
Sgo2b A T 8: 63,928,376 (GRCm38) I474N probably benign Het
Sgsm1 A T 5: 113,288,835 (GRCm38) I43N probably damaging Het
Shprh G A 10: 11,170,109 (GRCm38) M891I probably benign Het
Skiv2l A T 17: 34,844,815 (GRCm38) Y551N possibly damaging Het
Slc12a9 A G 5: 137,322,846 (GRCm38) M469T probably damaging Het
Slc4a2 A T 5: 24,435,943 (GRCm38) I747F probably damaging Het
Slc7a6 T A 8: 106,194,517 (GRCm38) N373K probably damaging Het
Slc7a6os T C 8: 106,201,056 (GRCm38) D296G probably benign Het
Sncaip A G 18: 52,905,809 (GRCm38) T120A probably damaging Het
Sorcs1 G C 19: 50,313,042 (GRCm38) probably null Het
Spata16 A G 3: 26,667,456 (GRCm38) E42G probably damaging Het
Syne2 A T 12: 75,962,641 (GRCm38) M2440L probably benign Het
Tead2 A G 7: 45,225,755 (GRCm38) E232G probably damaging Het
Tmf1 T G 6: 97,176,504 (GRCm38) T203P possibly damaging Het
Trrap C A 5: 144,816,395 (GRCm38) H1843Q probably benign Het
Unc79 C A 12: 103,171,644 (GRCm38) Q2314K probably damaging Het
Unc80 G T 1: 66,510,881 (GRCm38) G766V probably damaging Het
Vmn1r217 A G 13: 23,114,594 (GRCm38) L46P probably damaging Het
Vmn2r80 A T 10: 79,148,939 (GRCm38) I42F possibly damaging Het
Vwa5a T C 9: 38,728,665 (GRCm38) V403A probably damaging Het
Zfp42 T C 8: 43,295,951 (GRCm38) E171G probably damaging Het
Zfp64 A T 2: 168,926,040 (GRCm38) S551T probably benign Het
Other mutations in Ddx60
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00340:Ddx60 APN 8 61,958,646 (GRCm38) missense probably damaging 1.00
IGL00915:Ddx60 APN 8 61,987,431 (GRCm38) missense possibly damaging 0.79
IGL00931:Ddx60 APN 8 61,969,583 (GRCm38) missense probably benign 0.18
IGL01023:Ddx60 APN 8 61,942,514 (GRCm38) missense probably damaging 0.99
IGL01313:Ddx60 APN 8 61,982,526 (GRCm38) missense probably damaging 1.00
IGL01615:Ddx60 APN 8 61,963,740 (GRCm38) missense probably null 0.81
IGL01733:Ddx60 APN 8 61,983,865 (GRCm38) missense probably damaging 0.99
IGL01779:Ddx60 APN 8 62,017,823 (GRCm38) missense possibly damaging 0.94
IGL01900:Ddx60 APN 8 62,000,709 (GRCm38) splice site probably benign
IGL02110:Ddx60 APN 8 62,017,247 (GRCm38) critical splice donor site probably null
IGL02302:Ddx60 APN 8 61,975,832 (GRCm38) missense possibly damaging 0.85
IGL02468:Ddx60 APN 8 61,958,642 (GRCm38) missense probably damaging 1.00
IGL02569:Ddx60 APN 8 62,024,951 (GRCm38) missense possibly damaging 0.93
IGL02622:Ddx60 APN 8 61,942,436 (GRCm38) splice site probably null
IGL02657:Ddx60 APN 8 61,984,115 (GRCm38) missense probably benign 0.01
IGL02677:Ddx60 APN 8 61,988,132 (GRCm38) missense probably damaging 1.00
IGL02701:Ddx60 APN 8 61,979,341 (GRCm38) missense probably damaging 0.96
IGL02806:Ddx60 APN 8 61,956,122 (GRCm38) missense probably benign 0.00
IGL03137:Ddx60 APN 8 61,988,083 (GRCm38) missense possibly damaging 0.61
IGL03295:Ddx60 APN 8 61,956,121 (GRCm38) missense possibly damaging 0.82
IGL03387:Ddx60 APN 8 62,012,449 (GRCm38) missense probably damaging 1.00
IGL03411:Ddx60 APN 8 61,977,882 (GRCm38) critical splice acceptor site probably null
Scatter UTSW 8 62,021,314 (GRCm38) missense possibly damaging 0.80
shotgun UTSW 8 62,037,067 (GRCm38) missense probably benign 0.28
splay UTSW 8 62,021,309 (GRCm38) missense possibly damaging 0.80
G1Funyon:Ddx60 UTSW 8 62,000,597 (GRCm38) missense probably benign 0.01
PIT4504001:Ddx60 UTSW 8 61,958,113 (GRCm38) missense probably benign
PIT4677001:Ddx60 UTSW 8 61,972,254 (GRCm38) missense possibly damaging 0.87
R0090:Ddx60 UTSW 8 61,942,293 (GRCm38) missense probably damaging 1.00
R0266:Ddx60 UTSW 8 62,033,493 (GRCm38) missense possibly damaging 0.92
R0367:Ddx60 UTSW 8 62,017,749 (GRCm38) missense possibly damaging 0.78
R0403:Ddx60 UTSW 8 61,994,541 (GRCm38) splice site probably benign
R0479:Ddx60 UTSW 8 61,969,657 (GRCm38) missense probably damaging 1.00
R0561:Ddx60 UTSW 8 62,017,794 (GRCm38) missense possibly damaging 0.93
R0844:Ddx60 UTSW 8 61,987,361 (GRCm38) missense probably benign 0.27
R1119:Ddx60 UTSW 8 61,942,544 (GRCm38) missense probably damaging 1.00
R1428:Ddx60 UTSW 8 61,958,159 (GRCm38) splice site probably benign
R1778:Ddx60 UTSW 8 61,974,176 (GRCm38) missense possibly damaging 0.85
R1840:Ddx60 UTSW 8 61,969,553 (GRCm38) missense probably damaging 0.99
R1964:Ddx60 UTSW 8 61,948,869 (GRCm38) missense probably benign 0.10
R1970:Ddx60 UTSW 8 61,972,206 (GRCm38) missense possibly damaging 0.93
R2101:Ddx60 UTSW 8 61,940,645 (GRCm38) missense probably damaging 1.00
R2174:Ddx60 UTSW 8 62,017,200 (GRCm38) missense probably benign 0.01
R2174:Ddx60 UTSW 8 61,956,141 (GRCm38) missense probably damaging 1.00
R2198:Ddx60 UTSW 8 61,958,063 (GRCm38) missense possibly damaging 0.79
R2332:Ddx60 UTSW 8 62,037,091 (GRCm38) missense probably benign 0.08
R2338:Ddx60 UTSW 8 62,012,436 (GRCm38) missense possibly damaging 0.91
R2379:Ddx60 UTSW 8 62,037,088 (GRCm38) missense probably damaging 1.00
R4010:Ddx60 UTSW 8 61,956,144 (GRCm38) missense probably benign 0.25
R4010:Ddx60 UTSW 8 61,954,535 (GRCm38) missense possibly damaging 0.65
R4133:Ddx60 UTSW 8 61,972,220 (GRCm38) missense probably damaging 0.99
R4282:Ddx60 UTSW 8 61,994,393 (GRCm38) missense probably damaging 0.99
R4382:Ddx60 UTSW 8 61,948,978 (GRCm38) splice site probably null
R4561:Ddx60 UTSW 8 61,942,461 (GRCm38) missense probably damaging 0.96
R4572:Ddx60 UTSW 8 61,987,421 (GRCm38) missense probably damaging 1.00
R4581:Ddx60 UTSW 8 62,023,261 (GRCm38) missense possibly damaging 0.90
R4635:Ddx60 UTSW 8 62,037,067 (GRCm38) missense probably benign 0.28
R4698:Ddx60 UTSW 8 62,012,424 (GRCm38) missense probably benign 0.01
R4807:Ddx60 UTSW 8 61,979,338 (GRCm38) missense probably damaging 1.00
R4858:Ddx60 UTSW 8 62,021,314 (GRCm38) missense possibly damaging 0.80
R4964:Ddx60 UTSW 8 61,979,338 (GRCm38) missense probably damaging 1.00
R5120:Ddx60 UTSW 8 61,945,906 (GRCm38) missense probably benign 0.01
R5187:Ddx60 UTSW 8 61,974,188 (GRCm38) missense probably damaging 1.00
R5222:Ddx60 UTSW 8 61,984,158 (GRCm38) missense probably damaging 0.99
R5400:Ddx60 UTSW 8 62,010,002 (GRCm38) missense possibly damaging 0.65
R5500:Ddx60 UTSW 8 61,950,451 (GRCm38) missense probably benign 0.28
R5514:Ddx60 UTSW 8 61,958,057 (GRCm38) missense probably damaging 1.00
R5668:Ddx60 UTSW 8 62,000,578 (GRCm38) missense probably benign 0.38
R5742:Ddx60 UTSW 8 61,948,921 (GRCm38) missense probably benign
R5772:Ddx60 UTSW 8 61,948,897 (GRCm38) missense probably damaging 1.00
R5810:Ddx60 UTSW 8 62,012,388 (GRCm38) nonsense probably null
R5815:Ddx60 UTSW 8 61,963,722 (GRCm38) missense probably damaging 0.98
R5820:Ddx60 UTSW 8 61,956,121 (GRCm38) missense possibly damaging 0.82
R5866:Ddx60 UTSW 8 61,940,740 (GRCm38) missense probably damaging 1.00
R5881:Ddx60 UTSW 8 62,037,070 (GRCm38) missense probably damaging 1.00
R5977:Ddx60 UTSW 8 62,021,410 (GRCm38) critical splice donor site probably null
R6048:Ddx60 UTSW 8 62,000,582 (GRCm38) missense probably benign 0.01
R6061:Ddx60 UTSW 8 62,023,241 (GRCm38) missense probably null 0.01
R6153:Ddx60 UTSW 8 61,945,940 (GRCm38) missense possibly damaging 0.47
R6287:Ddx60 UTSW 8 61,950,578 (GRCm38) missense probably damaging 1.00
R6415:Ddx60 UTSW 8 61,983,905 (GRCm38) missense probably benign 0.00
R6416:Ddx60 UTSW 8 61,998,681 (GRCm38) missense probably benign
R6416:Ddx60 UTSW 8 61,977,950 (GRCm38) missense probably benign 0.00
R6660:Ddx60 UTSW 8 61,956,239 (GRCm38) missense probably benign 0.00
R6694:Ddx60 UTSW 8 62,037,070 (GRCm38) missense probably damaging 1.00
R6715:Ddx60 UTSW 8 61,983,890 (GRCm38) missense probably benign 0.03
R6720:Ddx60 UTSW 8 62,000,689 (GRCm38) missense probably benign 0.10
R6937:Ddx60 UTSW 8 62,037,069 (GRCm38) missense probably damaging 1.00
R7153:Ddx60 UTSW 8 61,988,108 (GRCm38) missense possibly damaging 0.71
R7274:Ddx60 UTSW 8 61,940,108 (GRCm38) critical splice donor site probably null
R7409:Ddx60 UTSW 8 61,958,578 (GRCm38) missense probably benign 0.24
R7464:Ddx60 UTSW 8 61,940,674 (GRCm38) missense possibly damaging 0.82
R7670:Ddx60 UTSW 8 61,975,792 (GRCm38) missense probably damaging 1.00
R7904:Ddx60 UTSW 8 61,977,890 (GRCm38) missense possibly damaging 0.81
R7992:Ddx60 UTSW 8 61,954,535 (GRCm38) missense probably benign 0.03
R8124:Ddx60 UTSW 8 61,983,911 (GRCm38) missense probably benign
R8125:Ddx60 UTSW 8 61,983,911 (GRCm38) missense probably benign
R8126:Ddx60 UTSW 8 61,983,911 (GRCm38) missense probably benign
R8155:Ddx60 UTSW 8 62,017,171 (GRCm38) missense possibly damaging 0.61
R8174:Ddx60 UTSW 8 62,017,250 (GRCm38) splice site probably null
R8192:Ddx60 UTSW 8 61,977,968 (GRCm38) missense probably damaging 1.00
R8271:Ddx60 UTSW 8 61,940,108 (GRCm38) critical splice donor site probably null
R8301:Ddx60 UTSW 8 62,000,597 (GRCm38) missense probably benign 0.01
R8304:Ddx60 UTSW 8 61,998,769 (GRCm38) missense possibly damaging 0.67
R8319:Ddx60 UTSW 8 61,942,635 (GRCm38) critical splice donor site probably null
R8374:Ddx60 UTSW 8 61,974,171 (GRCm38) missense probably benign 0.01
R8401:Ddx60 UTSW 8 61,956,243 (GRCm38) missense possibly damaging 0.57
R8487:Ddx60 UTSW 8 61,974,150 (GRCm38) missense probably damaging 1.00
R8804:Ddx60 UTSW 8 61,958,606 (GRCm38) missense probably benign 0.27
R8826:Ddx60 UTSW 8 61,945,956 (GRCm38) missense probably benign 0.02
R8829:Ddx60 UTSW 8 61,940,661 (GRCm38) missense probably damaging 1.00
R8881:Ddx60 UTSW 8 62,021,309 (GRCm38) missense possibly damaging 0.80
R8884:Ddx60 UTSW 8 61,994,519 (GRCm38) missense possibly damaging 0.86
R8990:Ddx60 UTSW 8 61,974,134 (GRCm38) nonsense probably null
R9122:Ddx60 UTSW 8 61,989,864 (GRCm38) missense probably benign 0.16
R9225:Ddx60 UTSW 8 62,017,841 (GRCm38) missense probably benign 0.36
R9278:Ddx60 UTSW 8 61,977,978 (GRCm38) missense possibly damaging 0.83
R9293:Ddx60 UTSW 8 62,009,960 (GRCm38) missense possibly damaging 0.89
R9405:Ddx60 UTSW 8 61,972,214 (GRCm38) missense probably benign 0.03
R9766:Ddx60 UTSW 8 62,012,278 (GRCm38) missense probably damaging 1.00
X0003:Ddx60 UTSW 8 62,033,417 (GRCm38) missense possibly damaging 0.88
X0019:Ddx60 UTSW 8 61,963,692 (GRCm38) missense probably benign 0.01
Z1177:Ddx60 UTSW 8 62,000,588 (GRCm38) missense possibly damaging 0.92
Predicted Primers PCR Primer
(F):5'- TCATCCCTGGAAGTGGGATTGAAGG -3'
(R):5'- ACGTGATCTATGGTTAGTGCAGCG -3'

Sequencing Primer
(F):5'- ggaagtgggattgaagggaaag -3'
(R):5'- TCTCCATAGAGCACTGGAGGG -3'
Posted On 2013-04-16