Incidental Mutation 'R3402:Or5b120'
| ID |
259244 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5b120
|
| Ensembl Gene |
ENSMUSG00000071629 |
| Gene Name |
olfactory receptor family 5 subfamily B member 120 |
| Synonyms |
Olfr1477, MOR202-10, GA_x6K02T2RE5P-3834960-3835907 |
| MMRRC Submission |
040621-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.062)
|
| Stock # |
R3402 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
19 |
| Chromosomal Location |
13477910-13480656 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 13480312 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Alanine to Threonine
at position 202
(A202T)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149565
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000096201]
[ENSMUST00000214274]
[ENSMUST00000217001]
|
| AlphaFold |
Q7TQQ7 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000096201
AA Change: A202T
PolyPhen 2
Score 0.112 (Sensitivity: 0.93; Specificity: 0.86)
|
| SMART Domains |
Protein: ENSMUSP00000093915
Gene: ENSMUSG00000095189
AA Change: A202T
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
306 |
3.9e-53 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
34 |
304 |
2.6e-6 |
PFAM |
|
Pfam:7tm_1
|
40 |
289 |
1.2e-16 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000208393
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000214274
AA Change: A202T
PolyPhen 2
Score 0.112 (Sensitivity: 0.93; Specificity: 0.86)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000217001
AA Change: A202T
PolyPhen 2
Score 0.112 (Sensitivity: 0.93; Specificity: 0.86)
|
| Meta Mutation Damage Score |
0.0898 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.1%
- 20x: 94.3%
|
| Validation Efficiency |
97% (30/31) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 29 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adamts3 |
A |
T |
5: 89,849,592 (GRCm39) |
F609L |
probably benign |
Het |
| Adgrv1 |
T |
C |
13: 81,691,661 (GRCm39) |
N1642S |
probably damaging |
Het |
| Afdn |
C |
T |
17: 14,104,176 (GRCm39) |
R1156C |
probably damaging |
Het |
| Ark2c |
A |
G |
18: 77,652,782 (GRCm39) |
V6A |
probably benign |
Het |
| Cactin |
G |
A |
10: 81,161,709 (GRCm39) |
R747H |
probably benign |
Het |
| Col12a1 |
T |
C |
9: 79,551,229 (GRCm39) |
E2129G |
probably damaging |
Het |
| Dennd4c |
C |
T |
4: 86,692,780 (GRCm39) |
P97S |
probably damaging |
Het |
| Dnah3 |
A |
G |
7: 119,566,879 (GRCm39) |
V2449A |
probably benign |
Het |
| Dysf |
G |
A |
6: 84,163,491 (GRCm39) |
|
probably null |
Het |
| Etl4 |
A |
T |
2: 20,786,693 (GRCm39) |
H763L |
probably damaging |
Het |
| Hip1r |
A |
G |
5: 124,135,046 (GRCm39) |
E394G |
probably damaging |
Het |
| Ift25 |
A |
G |
4: 107,130,803 (GRCm39) |
|
probably null |
Het |
| Kat2b |
C |
T |
17: 53,972,881 (GRCm39) |
P732S |
probably damaging |
Het |
| Myo16 |
A |
G |
8: 10,434,719 (GRCm39) |
N387S |
probably benign |
Het |
| Nlrp4d |
A |
T |
7: 10,096,781 (GRCm39) |
N906K |
probably damaging |
Het |
| Or1ad6 |
A |
G |
11: 50,859,895 (GRCm39) |
I17V |
probably benign |
Het |
| Pkn1 |
G |
A |
8: 84,396,859 (GRCm39) |
R926W |
probably damaging |
Het |
| Ppp1r37 |
C |
T |
7: 19,266,712 (GRCm39) |
A392T |
probably damaging |
Het |
| Prkcq |
A |
G |
2: 11,288,660 (GRCm39) |
T538A |
possibly damaging |
Het |
| Sel1l2 |
T |
A |
2: 140,082,958 (GRCm39) |
Y560F |
probably damaging |
Het |
| Slc6a6 |
A |
G |
6: 91,703,110 (GRCm39) |
H161R |
probably benign |
Het |
| Slit2 |
T |
C |
5: 48,440,763 (GRCm39) |
Y1212H |
probably damaging |
Het |
| Stk3 |
G |
T |
15: 34,945,144 (GRCm39) |
|
probably benign |
Het |
| Tcaf3 |
T |
C |
6: 42,570,787 (GRCm39) |
S322G |
probably benign |
Het |
| Tma16 |
C |
T |
8: 66,936,823 (GRCm39) |
|
probably null |
Het |
| Tmem74 |
C |
T |
15: 43,730,417 (GRCm39) |
V209M |
probably damaging |
Het |
| Unc80 |
A |
T |
1: 66,549,845 (GRCm39) |
E701V |
probably damaging |
Het |
| Upk3a |
T |
C |
15: 84,902,384 (GRCm39) |
|
probably null |
Het |
| Zfp180 |
G |
A |
7: 23,805,170 (GRCm39) |
V530I |
probably benign |
Het |
|
| Other mutations in Or5b120 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01926:Or5b120
|
APN |
19 |
13,480,105 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
IGL02394:Or5b120
|
APN |
19 |
13,480,228 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R0047:Or5b120
|
UTSW |
19 |
13,479,953 (GRCm39) |
missense |
probably benign |
0.30 |
|
R0047:Or5b120
|
UTSW |
19 |
13,479,953 (GRCm39) |
missense |
probably benign |
0.30 |
|
R0356:Or5b120
|
UTSW |
19 |
13,480,441 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R0617:Or5b120
|
UTSW |
19 |
13,479,900 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1589:Or5b120
|
UTSW |
19 |
13,480,121 (GRCm39) |
missense |
probably benign |
0.03 |
|
R1725:Or5b120
|
UTSW |
19 |
13,479,883 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2153:Or5b120
|
UTSW |
19 |
13,479,852 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2362:Or5b120
|
UTSW |
19 |
13,479,872 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4513:Or5b120
|
UTSW |
19 |
13,479,986 (GRCm39) |
missense |
probably benign |
0.05 |
|
R5197:Or5b120
|
UTSW |
19 |
13,479,748 (GRCm39) |
missense |
possibly damaging |
0.68 |
|
R5205:Or5b120
|
UTSW |
19 |
13,480,163 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5511:Or5b120
|
UTSW |
19 |
13,480,556 (GRCm39) |
missense |
probably benign |
0.12 |
|
R5838:Or5b120
|
UTSW |
19 |
13,479,922 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6023:Or5b120
|
UTSW |
19 |
13,480,067 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6232:Or5b120
|
UTSW |
19 |
13,480,427 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6700:Or5b120
|
UTSW |
19 |
13,480,177 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R6769:Or5b120
|
UTSW |
19 |
13,480,318 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R6771:Or5b120
|
UTSW |
19 |
13,480,318 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R7002:Or5b120
|
UTSW |
19 |
13,480,039 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7057:Or5b120
|
UTSW |
19 |
13,480,243 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7320:Or5b120
|
UTSW |
19 |
13,480,544 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R7827:Or5b120
|
UTSW |
19 |
13,480,587 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7913:Or5b120
|
UTSW |
19 |
13,480,571 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9199:Or5b120
|
UTSW |
19 |
13,480,436 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9286:Or5b120
|
UTSW |
19 |
13,479,791 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R9523:Or5b120
|
UTSW |
19 |
13,479,712 (GRCm39) |
missense |
probably benign |
|
|
R9606:Or5b120
|
UTSW |
19 |
13,479,943 (GRCm39) |
nonsense |
probably null |
|
|
| Predicted Primers |
PCR Primer
(F):5'- ATGACCGTCATGCAGCAGTG -3'
(R):5'- AGCTGGGCTGTAAGTACATG -3'
Sequencing Primer
(F):5'- GACAACTACGATATGTGTCTTGC -3'
(R):5'- GGGCTGTAAGTACATGAAGATAATTG -3'
|
| Posted On |
2015-01-23 |
Incidental Mutation