Incidental Mutation 'R2882:Klra1'
| ID |
260345 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Klra1
|
| Ensembl Gene |
ENSMUSG00000079853 |
| Gene Name |
killer cell lectin-like receptor, subfamily A, member 1 |
| Synonyms |
Ly49A, Ly49o<129> |
| MMRRC Submission |
040470-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.051)
|
| Stock # |
R2882 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
6 |
| Chromosomal Location |
130340881-130363837 bp(-) (GRCm39) |
| Type of Mutation |
splice site |
| DNA Base Change (assembly) |
A to T
at 130354826 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000032288
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000032288]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
probably null
Transcript: ENSMUST00000032288
|
| SMART Domains |
Protein: ENSMUSP00000032288
Gene: ENSMUSG00000079853
| Domain | Start | End | E-Value | Type |
|---|
|
Blast:CLECT
|
73 |
118 |
9e-8 |
BLAST |
|
CLECT
|
139 |
254 |
4.02e-15 |
SMART |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000127570
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.2%
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 29 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Atp9a |
T |
C |
2: 168,548,134 (GRCm39) |
Y7C |
probably damaging |
Het |
| Atxn3 |
C |
A |
12: 101,903,670 (GRCm39) |
L178F |
probably damaging |
Het |
| Cep112 |
T |
C |
11: 108,410,038 (GRCm39) |
S211P |
possibly damaging |
Het |
| Csl |
A |
G |
10: 99,594,787 (GRCm39) |
F93L |
probably damaging |
Het |
| Cyp4f40 |
A |
G |
17: 32,887,047 (GRCm39) |
I173V |
probably benign |
Het |
| Dcaf17 |
A |
G |
2: 70,912,371 (GRCm39) |
I319V |
possibly damaging |
Het |
| Dock5 |
T |
C |
14: 68,077,069 (GRCm39) |
Y258C |
probably damaging |
Het |
| Dpp10 |
T |
C |
1: 123,372,932 (GRCm39) |
E236G |
probably damaging |
Het |
| Dpyd |
A |
G |
3: 118,858,679 (GRCm39) |
D631G |
probably damaging |
Het |
| Ewsr1 |
C |
A |
11: 5,028,523 (GRCm39) |
|
probably benign |
Het |
| Fat2 |
C |
A |
11: 55,202,131 (GRCm39) |
L314F |
probably damaging |
Het |
| Gsdmc |
T |
C |
15: 63,651,644 (GRCm39) |
I259V |
probably benign |
Het |
| Hydin |
C |
T |
8: 111,293,555 (GRCm39) |
L3501F |
possibly damaging |
Het |
| Kdm2a |
A |
G |
19: 4,381,212 (GRCm39) |
|
probably null |
Het |
| Kremen1 |
CGGG |
CGGGGGG |
11: 5,151,791 (GRCm39) |
|
probably benign |
Het |
| Minar1 |
C |
T |
9: 89,484,855 (GRCm39) |
V181I |
possibly damaging |
Het |
| Mlh3 |
A |
T |
12: 85,314,340 (GRCm39) |
H615Q |
probably damaging |
Het |
| Mmp12 |
A |
G |
9: 7,358,236 (GRCm39) |
Y374C |
probably damaging |
Het |
| Mpp2 |
T |
C |
11: 101,955,459 (GRCm39) |
E97G |
probably benign |
Het |
| Oasl2 |
C |
T |
5: 115,049,084 (GRCm39) |
R175C |
probably damaging |
Het |
| Or1j19 |
A |
T |
2: 36,677,202 (GRCm39) |
I222F |
probably damaging |
Het |
| Pcdhac2 |
A |
T |
18: 37,278,865 (GRCm39) |
Q615L |
probably damaging |
Het |
| Ppm1h |
T |
A |
10: 122,777,239 (GRCm39) |
Y502N |
probably damaging |
Het |
| Slc5a11 |
GGTGC |
G |
7: 122,838,595 (GRCm39) |
|
probably null |
Het |
| Spata31d1e |
C |
A |
13: 59,890,757 (GRCm39) |
Q354H |
probably benign |
Het |
| Tex15 |
T |
A |
8: 34,064,935 (GRCm39) |
L1455* |
probably null |
Het |
| Tgm6 |
T |
C |
2: 129,979,359 (GRCm39) |
V163A |
probably benign |
Het |
| Tlr5 |
C |
T |
1: 182,801,458 (GRCm39) |
T240M |
probably damaging |
Het |
| Washc4 |
T |
C |
10: 83,415,365 (GRCm39) |
I785T |
possibly damaging |
Het |
|
| Other mutations in Klra1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01132:Klra1
|
APN |
6 |
130,341,237 (GRCm39) |
nonsense |
probably null |
|
|
IGL01320:Klra1
|
APN |
6 |
130,341,224 (GRCm39) |
missense |
probably benign |
0.02 |
|
IGL01322:Klra1
|
APN |
6 |
130,341,224 (GRCm39) |
missense |
probably benign |
0.02 |
|
IGL02149:Klra1
|
APN |
6 |
130,352,293 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02666:Klra1
|
APN |
6 |
130,341,278 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02895:Klra1
|
APN |
6 |
130,352,203 (GRCm39) |
missense |
possibly damaging |
0.51 |
|
R0004:Klra1
|
UTSW |
6 |
130,349,836 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0408:Klra1
|
UTSW |
6 |
130,354,737 (GRCm39) |
missense |
probably benign |
0.13 |
|
R0442:Klra1
|
UTSW |
6 |
130,349,835 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0498:Klra1
|
UTSW |
6 |
130,349,782 (GRCm39) |
critical splice donor site |
probably null |
|
|
R0765:Klra1
|
UTSW |
6 |
130,356,055 (GRCm39) |
splice site |
probably benign |
|
|
R1761:Klra1
|
UTSW |
6 |
130,349,836 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1922:Klra1
|
UTSW |
6 |
130,349,828 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1987:Klra1
|
UTSW |
6 |
130,354,742 (GRCm39) |
missense |
probably benign |
|
|
R5054:Klra1
|
UTSW |
6 |
130,352,247 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5190:Klra1
|
UTSW |
6 |
130,352,241 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5572:Klra1
|
UTSW |
6 |
130,349,802 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R5825:Klra1
|
UTSW |
6 |
130,357,592 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6784:Klra1
|
UTSW |
6 |
130,349,817 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8957:Klra1
|
UTSW |
6 |
130,357,609 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R9154:Klra1
|
UTSW |
6 |
130,357,607 (GRCm39) |
missense |
|
|
|
Z1176:Klra1
|
UTSW |
6 |
130,349,814 (GRCm39) |
missense |
probably damaging |
0.99 |
|
| Predicted Primers |
PCR Primer
(F):5'- AATCTGTTCTGATCCCTGTTGAGG -3'
(R):5'- AGGTGGATATCTTGCATTCCATATG -3'
Sequencing Primer
(F):5'- TTGAGGGATTCCAGAAGATCACACTC -3'
(R):5'- CTACCACCATTTTATTCAGC -3'
|
| Posted On |
2015-01-23 |
Incidental Mutation