Incidental Mutation 'R1298:Cdk18'
ID |
262750 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Cdk18
|
Ensembl Gene |
ENSMUSG00000026437 |
Gene Name |
cyclin dependent kinase 18 |
Synonyms |
Pctk3 |
MMRRC Submission |
039364-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.227)
|
Stock # |
R1298 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
1 |
Chromosomal Location |
132041285-132067433 bp(-) (GRCm39) |
Type of Mutation |
start gained |
DNA Base Change (assembly) |
A to C
at 132050189 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000107981
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000027697]
[ENSMUST00000112362]
|
AlphaFold |
Q04899 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000027697
|
SMART Domains |
Protein: ENSMUSP00000027697 Gene: ENSMUSG00000026437
Domain | Start | End | E-Value | Type |
S_TKc
|
121 |
402 |
1.13e-95 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000112362
|
SMART Domains |
Protein: ENSMUSP00000107981 Gene: ENSMUSG00000026437
Domain | Start | End | E-Value | Type |
S_TKc
|
121 |
402 |
1.13e-95 |
SMART |
|
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.7%
- 20x: 94.1%
|
Validation Efficiency |
100% (38/38) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 33 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Alox5 |
A |
G |
6: 116,404,225 (GRCm39) |
W145R |
probably damaging |
Het |
Aspm |
T |
A |
1: 139,385,157 (GRCm39) |
V267D |
probably benign |
Het |
Bbs4 |
A |
T |
9: 59,247,096 (GRCm39) |
W135R |
probably damaging |
Het |
Cavin4 |
T |
C |
4: 48,672,593 (GRCm39) |
V346A |
probably benign |
Het |
Cyp2j11 |
C |
T |
4: 96,195,497 (GRCm39) |
|
probably null |
Het |
Dnah6 |
A |
T |
6: 73,136,118 (GRCm39) |
I1007K |
probably damaging |
Het |
Dnmt1 |
T |
C |
9: 20,852,752 (GRCm39) |
E118G |
probably benign |
Het |
Eef2 |
C |
CN |
10: 81,014,602 (GRCm39) |
|
probably null |
Het |
Eif1ad5 |
T |
A |
12: 87,946,853 (GRCm39) |
D98E |
probably benign |
Het |
Gm14496 |
T |
C |
2: 181,637,885 (GRCm39) |
F320L |
probably benign |
Het |
Gsdmc3 |
A |
T |
15: 63,732,130 (GRCm39) |
L299M |
probably damaging |
Het |
H6pd |
T |
C |
4: 150,066,971 (GRCm39) |
I472V |
probably benign |
Het |
Hao2 |
G |
T |
3: 98,790,985 (GRCm39) |
T63K |
possibly damaging |
Het |
Jag2 |
C |
T |
12: 112,879,939 (GRCm39) |
|
probably benign |
Het |
Mapre3 |
A |
G |
5: 31,022,211 (GRCm39) |
Y211C |
probably damaging |
Het |
Mycbp2 |
A |
G |
14: 103,393,334 (GRCm39) |
S2966P |
probably damaging |
Het |
Nsd3 |
T |
A |
8: 26,169,952 (GRCm39) |
V696E |
possibly damaging |
Het |
Obscn |
A |
G |
11: 58,945,723 (GRCm39) |
Y4163H |
possibly damaging |
Het |
Or11h4b |
A |
T |
14: 50,918,337 (GRCm39) |
Y251* |
probably null |
Het |
Or12e8 |
G |
A |
2: 87,188,414 (GRCm39) |
A209T |
probably benign |
Het |
Or6c3 |
G |
T |
10: 129,308,933 (GRCm39) |
C124F |
probably damaging |
Het |
Pde2a |
A |
G |
7: 101,156,409 (GRCm39) |
E607G |
probably benign |
Het |
Pinlyp |
T |
A |
7: 24,244,391 (GRCm39) |
D51V |
probably damaging |
Het |
Rcbtb2 |
T |
A |
14: 73,399,828 (GRCm39) |
I87N |
probably damaging |
Het |
Sfswap |
A |
G |
5: 129,618,442 (GRCm39) |
I459V |
probably benign |
Het |
Slitrk6 |
T |
C |
14: 110,989,297 (GRCm39) |
N137D |
possibly damaging |
Het |
Smg1 |
A |
T |
7: 117,767,434 (GRCm39) |
|
probably benign |
Het |
Sobp |
T |
A |
10: 42,898,331 (GRCm39) |
H418L |
probably damaging |
Het |
Spock1 |
A |
C |
13: 57,660,563 (GRCm39) |
D180E |
probably benign |
Het |
Upk3a |
G |
A |
15: 84,904,752 (GRCm39) |
V167I |
probably benign |
Het |
Vmn1r180 |
T |
C |
7: 23,652,572 (GRCm39) |
V245A |
possibly damaging |
Het |
Zbtb25 |
T |
C |
12: 76,396,775 (GRCm39) |
E149G |
probably benign |
Het |
Zgrf1 |
T |
C |
3: 127,377,538 (GRCm39) |
C44R |
possibly damaging |
Het |
|
Other mutations in Cdk18 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00519:Cdk18
|
APN |
1 |
132,043,226 (GRCm39) |
missense |
probably benign |
0.36 |
IGL00929:Cdk18
|
APN |
1 |
132,046,257 (GRCm39) |
critical splice donor site |
probably null |
|
R0184:Cdk18
|
UTSW |
1 |
132,046,276 (GRCm39) |
missense |
probably benign |
0.00 |
R0606:Cdk18
|
UTSW |
1 |
132,045,355 (GRCm39) |
unclassified |
probably benign |
|
R0624:Cdk18
|
UTSW |
1 |
132,046,610 (GRCm39) |
missense |
probably damaging |
1.00 |
R1295:Cdk18
|
UTSW |
1 |
132,047,698 (GRCm39) |
unclassified |
probably benign |
|
R1296:Cdk18
|
UTSW |
1 |
132,047,698 (GRCm39) |
unclassified |
probably benign |
|
R1611:Cdk18
|
UTSW |
1 |
132,050,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R1959:Cdk18
|
UTSW |
1 |
132,045,559 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2184:Cdk18
|
UTSW |
1 |
132,043,690 (GRCm39) |
missense |
probably damaging |
1.00 |
R2279:Cdk18
|
UTSW |
1 |
132,043,690 (GRCm39) |
missense |
probably damaging |
1.00 |
R2391:Cdk18
|
UTSW |
1 |
132,043,212 (GRCm39) |
missense |
probably benign |
|
R4601:Cdk18
|
UTSW |
1 |
132,044,657 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5001:Cdk18
|
UTSW |
1 |
132,046,587 (GRCm39) |
critical splice donor site |
probably null |
|
R5208:Cdk18
|
UTSW |
1 |
132,045,218 (GRCm39) |
critical splice donor site |
probably null |
|
R5818:Cdk18
|
UTSW |
1 |
132,046,836 (GRCm39) |
critical splice donor site |
probably null |
|
R6282:Cdk18
|
UTSW |
1 |
132,047,758 (GRCm39) |
missense |
probably damaging |
1.00 |
R6546:Cdk18
|
UTSW |
1 |
132,050,088 (GRCm39) |
missense |
probably damaging |
0.99 |
R6644:Cdk18
|
UTSW |
1 |
132,049,807 (GRCm39) |
nonsense |
probably null |
|
R6892:Cdk18
|
UTSW |
1 |
132,049,848 (GRCm39) |
missense |
probably benign |
0.01 |
R6965:Cdk18
|
UTSW |
1 |
132,045,319 (GRCm39) |
missense |
probably damaging |
0.98 |
R7698:Cdk18
|
UTSW |
1 |
132,050,116 (GRCm39) |
missense |
probably damaging |
1.00 |
R7828:Cdk18
|
UTSW |
1 |
132,044,642 (GRCm39) |
missense |
possibly damaging |
0.69 |
R9386:Cdk18
|
UTSW |
1 |
132,044,183 (GRCm39) |
critical splice donor site |
probably null |
|
R9488:Cdk18
|
UTSW |
1 |
132,049,260 (GRCm39) |
missense |
probably benign |
0.01 |
|
Predicted Primers |
|
Posted On |
2015-02-04 |