Mutagenetix > Incidental Mutation

Incidental Mutation 'R3106:Pramel31'

263045

Institutional Source

Beutler Lab

Gene Symbol

Pramel31

Ensembl Gene

ENSMUSG00000070619

Gene Name

PRAME like 31

Synonyms

Gm13119

MMRRC Submission

040580-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R3106 (G1)

Quality Score

161

Status

Validated

Chromosome

Chromosomal Location

144084534-144090989 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 144088246 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 14 (V14A)

Ref Sequence

ENSEMBL: ENSMUSP00000092103 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000094526]

AlphaFold

B1ARV5

Predicted Effect

probably benign
Transcript: ENSMUST00000094526
AA Change: V14A

PolyPhen 2 Score 0.039 (Sensitivity: 0.94; Specificity: 0.83)

SMART Domains

Protein: ENSMUSP00000092103
Gene: ENSMUSG00000070619
AA Change: V14A

Domain	Start	End	E-Value	Type
SCOP:d1a4ya_	210	414	3e-10	SMART

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.4%
20x: 95.7%

Validation Efficiency

100% (53/53)

Allele List at MGI

Other mutations in this stock

Total: 53 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca15	A	T	7: 119,995,856 (GRCm39)	E1331V	possibly damaging	Het
Adam22	A	G	5: 8,167,583 (GRCm39)		probably null	Het
Adamts17	T	A	7: 66,774,820 (GRCm39)	S980T	probably damaging	Het
Adarb1	C	A	10: 77,157,591 (GRCm39)	K285N	probably damaging	Het
Atp5f1c	A	G	2: 10,068,276 (GRCm39)	S160P	probably benign	Het
Baz2a	AGCGGCGGTACTTGCGGG	AG	10: 127,960,946 (GRCm39)		probably null	Het
Btf3	T	G	13: 98,447,496 (GRCm39)	E145D	probably benign	Het
Ccdc184	G	T	15: 98,066,482 (GRCm39)	A96S	probably damaging	Het
Ccdc191	T	C	16: 43,751,573 (GRCm39)	F301S	probably damaging	Het
Ceacam5	T	C	7: 17,481,248 (GRCm39)	Y332H	probably benign	Het
Clip2	T	C	5: 134,551,918 (GRCm39)	K68R	probably benign	Het
Cntln	C	T	4: 84,875,406 (GRCm39)	T280M	possibly damaging	Het
Col6a3	T	C	1: 90,744,024 (GRCm39)	R515G	probably damaging	Het
Ctnnal1	G	A	4: 56,813,246 (GRCm39)	L662F	probably benign	Het
Dennd3	C	A	15: 73,436,973 (GRCm39)	S118*	probably null	Het
Dgkg	T	A	16: 22,394,091 (GRCm39)	T321S	probably damaging	Het
Dzip1l	A	T	9: 99,524,625 (GRCm39)	K249*	probably null	Het
Dzip1l	A	G	9: 99,529,174 (GRCm39)	E301G	probably benign	Het
Emc10	G	A	7: 44,142,616 (GRCm39)	R109W	probably damaging	Het
Ezh1	A	C	11: 101,086,468 (GRCm39)	C575W	probably damaging	Het
Fam187b	A	G	7: 30,676,665 (GRCm39)	D58G	probably benign	Het
Galnt4	T	C	10: 98,945,243 (GRCm39)	Y323H	probably benign	Het
Grm1	A	G	10: 10,955,601 (GRCm39)	S228P	probably benign	Het
H1f2	G	T	13: 23,922,883 (GRCm39)	A18S	unknown	Het
Hnf4g	T	G	3: 3,717,916 (GRCm39)	S388R	probably benign	Het
Il1rap	A	G	16: 26,541,502 (GRCm39)	E581G	probably benign	Het
Lemd2	C	A	17: 27,420,644 (GRCm39)	L256F	probably damaging	Het
Mnd1	C	A	3: 84,041,416 (GRCm39)	C62F	probably benign	Het
Nphs1	C	A	7: 30,166,965 (GRCm39)	S724*	probably null	Het
Or4g17	A	G	2: 111,209,840 (GRCm39)	N165S	probably benign	Het
Or5w13	T	C	2: 87,523,849 (GRCm39)	I126V	probably damaging	Het
Osgep	T	C	14: 51,154,286 (GRCm39)	T225A	probably benign	Het
Pan3	T	C	5: 147,476,189 (GRCm39)		probably benign	Het
Pld3	A	G	7: 27,235,212 (GRCm39)		probably null	Het
Plekha7	C	T	7: 115,763,639 (GRCm39)	R321K	probably benign	Het
Plekhg5	C	T	4: 152,196,635 (GRCm39)	T694M	probably damaging	Het
Ptpn20	A	G	14: 33,334,253 (GRCm39)	I44V	probably benign	Het
Ptprj	T	A	2: 90,270,975 (GRCm39)	H1251L	probably damaging	Het
Sbspon	T	C	1: 15,962,806 (GRCm39)	E24G	probably benign	Het
Sfmbt1	G	A	14: 30,539,753 (GRCm39)	C847Y	probably damaging	Het
Sparcl1	T	C	5: 104,241,203 (GRCm39)	T74A	probably benign	Het
Sppl2b	A	G	10: 80,703,325 (GRCm39)	E529G	probably benign	Het
Stradb	C	A	1: 59,031,450 (GRCm39)	H212Q	possibly damaging	Het
Tkfc	G	T	19: 10,574,357 (GRCm39)	C198*	probably null	Het
Tm4sf4	C	T	3: 57,345,043 (GRCm39)	R150C	possibly damaging	Het
Tmem212	T	C	3: 27,939,019 (GRCm39)	S156G	probably damaging	Het
Tmem51	T	C	4: 141,765,035 (GRCm39)	N8D	probably damaging	Het
Tmigd1	A	G	11: 76,801,124 (GRCm39)	T204A	possibly damaging	Het
Trp53bp1	A	G	2: 121,067,133 (GRCm39)	L531S	probably damaging	Het
Tsga10	G	A	1: 37,840,872 (GRCm39)	L445F	probably damaging	Het
Urb1	C	T	16: 90,592,331 (GRCm39)	V310I	probably damaging	Het
Vmn2r129	T	A	4: 156,685,730 (GRCm39)		noncoding transcript	Het
Wdr19	T	C	5: 65,359,966 (GRCm39)	S24P	probably benign	Het

Other mutations in Pramel31

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00088:Pramel31	APN	4	144,089,100 (GRCm39)	missense	possibly damaging	0.91
IGL00485:Pramel31	APN	4	144,090,012 (GRCm39)	missense	probably damaging	0.99
IGL01025:Pramel31	APN	4	144,089,947 (GRCm39)	missense	probably damaging	1.00
IGL01102:Pramel31	APN	4	144,090,195 (GRCm39)	missense	probably benign	0.08
IGL01631:Pramel31	APN	4	144,089,015 (GRCm39)	missense	probably benign	0.12
IGL02228:Pramel31	APN	4	144,089,231 (GRCm39)	missense	probably damaging	1.00
IGL02708:Pramel31	APN	4	144,089,983 (GRCm39)	missense	probably damaging	1.00
IGL02827:Pramel31	APN	4	144,090,331 (GRCm39)	missense	probably damaging	1.00
IGL03398:Pramel31	APN	4	144,090,061 (GRCm39)	missense	probably damaging	1.00
R0403:Pramel31	UTSW	4	144,089,216 (GRCm39)	missense	probably benign	0.00
R0627:Pramel31	UTSW	4	144,089,416 (GRCm39)	missense	probably benign	0.03
R0632:Pramel31	UTSW	4	144,090,352 (GRCm39)	missense	probably damaging	1.00
R1783:Pramel31	UTSW	4	144,088,295 (GRCm39)	missense	probably benign	0.01
R1895:Pramel31	UTSW	4	144,088,435 (GRCm39)	missense	probably benign	0.11
R1946:Pramel31	UTSW	4	144,088,435 (GRCm39)	missense	probably benign	0.11
R2263:Pramel31	UTSW	4	144,090,111 (GRCm39)	missense	probably benign	0.00
R2389:Pramel31	UTSW	4	144,089,983 (GRCm39)	missense	probably damaging	1.00
R2435:Pramel31	UTSW	4	144,089,473 (GRCm39)	missense	possibly damaging	0.75
R3013:Pramel31	UTSW	4	144,089,025 (GRCm39)	missense	probably damaging	0.98
R3021:Pramel31	UTSW	4	144,088,369 (GRCm39)	missense	probably damaging	0.99
R5237:Pramel31	UTSW	4	144,089,041 (GRCm39)	nonsense	probably null
R5411:Pramel31	UTSW	4	144,088,207 (GRCm39)	start codon destroyed	probably null	1.00
R5532:Pramel31	UTSW	4	144,090,061 (GRCm39)	missense	probably damaging	1.00
R6229:Pramel31	UTSW	4	144,090,199 (GRCm39)	missense	probably benign	0.03
R6277:Pramel31	UTSW	4	144,090,223 (GRCm39)	missense	probably damaging	1.00
R6625:Pramel31	UTSW	4	144,090,369 (GRCm39)	missense	probably damaging	1.00
R6717:Pramel31	UTSW	4	144,089,227 (GRCm39)	missense	probably benign	0.00
R7103:Pramel31	UTSW	4	144,090,297 (GRCm39)	missense	probably benign	0.00
R7207:Pramel31	UTSW	4	144,088,473 (GRCm39)	missense	probably benign	0.08
R8934:Pramel31	UTSW	4	144,090,345 (GRCm39)	missense	possibly damaging	0.54
R9325:Pramel31	UTSW	4	144,089,093 (GRCm39)	missense	probably benign
R9411:Pramel31	UTSW	4	144,089,997 (GRCm39)	missense	probably benign	0.00
Z1177:Pramel31	UTSW	4	144,089,543 (GRCm39)	missense	possibly damaging	0.89

Predicted Primers

PCR Primer
(F):5'- GGCTTTGTGACCACCAGATC -3'
(R):5'- GTCAGGGATGTTCATCAGTGCC -3'

Sequencing Primer
(F):5'- ACACTGAGTTCCACACTGTG -3'
(R):5'- ATGTTCATCAGTGCCCCCACAG -3'

Posted On

2015-02-05