Incidental Mutation 'R3149:Vmn1r86'
ID |
264349 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r86
|
Ensembl Gene |
ENSMUSG00000070816 |
Gene Name |
vomeronasal 1 receptor 86 |
Synonyms |
Gm10301 |
MMRRC Submission |
040601-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.050)
|
Stock # |
R3149 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
7 |
Chromosomal Location |
12835924-12836874 bp(-) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
T to A
at 12836358 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Lysine to Stop codon
at position 123
(K123*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154464
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000094828]
[ENSMUST00000226604]
[ENSMUST00000227220]
[ENSMUST00000227700]
|
AlphaFold |
L7N213 |
Predicted Effect |
probably null
Transcript: ENSMUST00000094828
AA Change: K173*
|
SMART Domains |
Protein: ENSMUSP00000092423 Gene: ENSMUSG00000070816 AA Change: K173*
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
1 |
306 |
1.1e-14 |
PFAM |
Pfam:V1R
|
35 |
301 |
4e-31 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000210729
|
Predicted Effect |
probably null
Transcript: ENSMUST00000226604
AA Change: K173*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000227220
AA Change: K173*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000227700
AA Change: K123*
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.7%
- 10x: 97.5%
- 20x: 95.7%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 31 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acsbg3 |
G |
A |
17: 57,183,348 (GRCm39) |
A30T |
probably benign |
Het |
Atox1 |
A |
G |
11: 55,341,379 (GRCm39) |
L52P |
possibly damaging |
Het |
Cel |
T |
C |
2: 28,446,143 (GRCm39) |
D576G |
probably benign |
Het |
Csf2ra |
C |
A |
19: 61,215,758 (GRCm39) |
A16S |
possibly damaging |
Het |
Cyp4f18 |
T |
C |
8: 72,747,044 (GRCm39) |
D317G |
possibly damaging |
Het |
Dus1l |
T |
C |
11: 120,683,930 (GRCm39) |
T173A |
possibly damaging |
Het |
Dzip1 |
T |
C |
14: 119,148,780 (GRCm39) |
T300A |
probably benign |
Het |
Ggta1 |
A |
T |
2: 35,292,635 (GRCm39) |
I224N |
probably damaging |
Het |
Gm5150 |
A |
G |
3: 16,060,479 (GRCm39) |
L3P |
probably damaging |
Het |
Gm5592 |
A |
G |
7: 40,937,804 (GRCm39) |
E362G |
probably benign |
Het |
Gm7137 |
T |
C |
10: 77,623,839 (GRCm39) |
|
probably benign |
Het |
Gpatch2l |
A |
G |
12: 86,291,089 (GRCm39) |
T91A |
possibly damaging |
Het |
Hoxa13 |
G |
T |
6: 52,237,284 (GRCm39) |
|
probably benign |
Het |
Ift46 |
A |
G |
9: 44,695,045 (GRCm39) |
D65G |
probably damaging |
Het |
Kirrel1 |
C |
T |
3: 86,996,458 (GRCm39) |
M380I |
probably null |
Het |
Mapk11 |
T |
C |
15: 89,029,653 (GRCm39) |
|
probably null |
Het |
Mettl25 |
T |
C |
10: 105,662,214 (GRCm39) |
D252G |
probably benign |
Het |
Mrc2 |
G |
A |
11: 105,239,257 (GRCm39) |
|
probably null |
Het |
Or10ab4 |
C |
T |
7: 107,654,989 (GRCm39) |
R267C |
probably benign |
Het |
Pecam1 |
A |
G |
11: 106,575,107 (GRCm39) |
V601A |
possibly damaging |
Het |
Prkx |
A |
T |
X: 76,814,881 (GRCm39) |
F260I |
probably damaging |
Het |
Rassf9 |
A |
T |
10: 102,380,687 (GRCm39) |
D21V |
possibly damaging |
Het |
Rmnd5a |
T |
A |
6: 71,406,085 (GRCm39) |
I68L |
probably benign |
Het |
Rock2 |
T |
C |
12: 17,015,092 (GRCm39) |
S762P |
probably damaging |
Het |
Septin4 |
T |
C |
11: 87,458,070 (GRCm39) |
V148A |
possibly damaging |
Het |
Srgap2 |
T |
C |
1: 131,220,327 (GRCm39) |
T216A |
probably benign |
Het |
Tasor2 |
G |
A |
13: 3,624,359 (GRCm39) |
P1182S |
probably damaging |
Het |
Vmn2r68 |
A |
C |
7: 84,886,875 (GRCm39) |
V13G |
probably benign |
Het |
Vps13d |
G |
C |
4: 144,853,147 (GRCm39) |
N2322K |
possibly damaging |
Het |
Xpo5 |
A |
G |
17: 46,553,173 (GRCm39) |
|
probably null |
Het |
Zswim9 |
T |
C |
7: 13,011,196 (GRCm39) |
T51A |
possibly damaging |
Het |
|
Other mutations in Vmn1r86 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00492:Vmn1r86
|
APN |
7 |
12,836,468 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL01124:Vmn1r86
|
APN |
7 |
12,836,856 (GRCm39) |
missense |
probably benign |
0.04 |
IGL01291:Vmn1r86
|
APN |
7 |
12,836,433 (GRCm39) |
missense |
probably benign |
0.14 |
IGL02347:Vmn1r86
|
APN |
7 |
12,836,574 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02457:Vmn1r86
|
APN |
7 |
12,836,707 (GRCm39) |
missense |
probably benign |
|
IGL02983:Vmn1r86
|
APN |
7 |
12,836,741 (GRCm39) |
missense |
probably damaging |
1.00 |
ANU05:Vmn1r86
|
UTSW |
7 |
12,836,433 (GRCm39) |
missense |
probably benign |
0.14 |
R0304:Vmn1r86
|
UTSW |
7 |
12,836,707 (GRCm39) |
missense |
probably benign |
|
R0525:Vmn1r86
|
UTSW |
7 |
12,836,088 (GRCm39) |
missense |
probably benign |
0.13 |
R1958:Vmn1r86
|
UTSW |
7 |
12,836,621 (GRCm39) |
missense |
possibly damaging |
0.94 |
R2227:Vmn1r86
|
UTSW |
7 |
12,836,847 (GRCm39) |
missense |
probably benign |
0.00 |
R3896:Vmn1r86
|
UTSW |
7 |
12,836,093 (GRCm39) |
missense |
probably benign |
0.18 |
R4735:Vmn1r86
|
UTSW |
7 |
12,836,221 (GRCm39) |
missense |
probably damaging |
1.00 |
R5219:Vmn1r86
|
UTSW |
7 |
12,836,382 (GRCm39) |
missense |
probably damaging |
1.00 |
R6003:Vmn1r86
|
UTSW |
7 |
12,836,125 (GRCm39) |
nonsense |
probably null |
|
R6457:Vmn1r86
|
UTSW |
7 |
12,836,279 (GRCm39) |
missense |
possibly damaging |
0.70 |
R7442:Vmn1r86
|
UTSW |
7 |
12,835,983 (GRCm39) |
missense |
possibly damaging |
0.70 |
R7622:Vmn1r86
|
UTSW |
7 |
12,836,685 (GRCm39) |
missense |
probably benign |
0.07 |
R8436:Vmn1r86
|
UTSW |
7 |
12,836,771 (GRCm39) |
missense |
probably benign |
0.25 |
R9141:Vmn1r86
|
UTSW |
7 |
12,836,789 (GRCm39) |
nonsense |
probably null |
|
R9374:Vmn1r86
|
UTSW |
7 |
12,836,781 (GRCm39) |
missense |
possibly damaging |
0.86 |
R9398:Vmn1r86
|
UTSW |
7 |
12,836,261 (GRCm39) |
missense |
probably damaging |
0.98 |
R9551:Vmn1r86
|
UTSW |
7 |
12,836,781 (GRCm39) |
missense |
possibly damaging |
0.86 |
R9552:Vmn1r86
|
UTSW |
7 |
12,836,781 (GRCm39) |
missense |
possibly damaging |
0.86 |
R9606:Vmn1r86
|
UTSW |
7 |
12,836,741 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- AACAGGATGCTGTGAGTGGC -3'
(R):5'- TAAGCACGTTCCAAGTCATCAC -3'
Sequencing Primer
(F):5'- CTTTGCGCTCAGGAGATGGC -3'
(R):5'- TCCCAGTAACTCTAAGTGGGC -3'
|
Posted On |
2015-02-05 |