Incidental Mutation 'R2939:Gpatch8'
ID 264599
Institutional Source Beutler Lab
Gene Symbol Gpatch8
Ensembl Gene ENSMUSG00000034621
Gene Name G patch domain containing 8
Synonyms Fbm1, Gpatc8, ENSMUSG00000075516, 5430405G24Rik
MMRRC Submission 040516-MU
Accession Numbers
Essential gene? Possibly essential (E-score: 0.570) question?
Stock # R2939 (G1)
Quality Score 225
Status Validated
Chromosome 11
Chromosomal Location 102366741-102447218 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 102399010 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 74 (V74A)
Ref Sequence ENSEMBL: ENSMUSP00000120649 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000143842]
AlphaFold A2A6A1
Predicted Effect noncoding transcript
Transcript: ENSMUST00000069673
Predicted Effect noncoding transcript
Transcript: ENSMUST00000126804
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131573
Predicted Effect unknown
Transcript: ENSMUST00000143842
AA Change: V74A
SMART Domains Protein: ENSMUSP00000120649
Gene: ENSMUSG00000034621
AA Change: V74A

DomainStartEndE-ValueType
G_patch 38 84 6.03e-12 SMART
coiled coil region 89 130 N/A INTRINSIC
ZnF_C2H2 136 160 6.4e0 SMART
coiled coil region 183 209 N/A INTRINSIC
low complexity region 224 234 N/A INTRINSIC
low complexity region 235 246 N/A INTRINSIC
internal_repeat_1 307 391 1.55e-5 PROSPERO
low complexity region 474 490 N/A INTRINSIC
internal_repeat_1 583 658 1.55e-5 PROSPERO
low complexity region 666 687 N/A INTRINSIC
low complexity region 691 720 N/A INTRINSIC
low complexity region 722 753 N/A INTRINSIC
low complexity region 761 772 N/A INTRINSIC
low complexity region 798 820 N/A INTRINSIC
low complexity region 829 885 N/A INTRINSIC
low complexity region 887 980 N/A INTRINSIC
low complexity region 988 1010 N/A INTRINSIC
low complexity region 1166 1183 N/A INTRINSIC
low complexity region 1208 1217 N/A INTRINSIC
low complexity region 1326 1342 N/A INTRINSIC
low complexity region 1345 1361 N/A INTRINSIC
low complexity region 1379 1404 N/A INTRINSIC
low complexity region 1438 1452 N/A INTRINSIC
low complexity region 1463 1490 N/A INTRINSIC
Meta Mutation Damage Score 0.2203 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 94.6%
Validation Efficiency 98% (62/63)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene contains an RNA-processing domain, a zinc finger domain, a lysine-rich region and a serine-rich region. A mutation in the serine-rich region of the protein is thought to be associated with hyperuricemia (PMID: 21594610). Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Feb 2015]
Allele List at MGI
Other mutations in this stock
Total: 58 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Actl11 T C 9: 107,808,409 (GRCm39) Y911H possibly damaging Het
Arhgef26 A C 3: 62,288,331 (GRCm39) K467T possibly damaging Het
Armcx6 A T X: 133,650,625 (GRCm39) W69R probably damaging Het
Asl T C 5: 130,042,245 (GRCm39) Y277C probably damaging Het
Atm T C 9: 53,406,011 (GRCm39) Y1219C probably damaging Het
Azin2 C T 4: 128,828,397 (GRCm39) C270Y probably benign Het
Brsk1 A T 7: 4,711,139 (GRCm39) I545F possibly damaging Het
Carm1 C A 9: 21,490,692 (GRCm39) probably null Het
Cfap410 A G 10: 77,817,507 (GRCm39) N78S probably benign Het
Cfap69 G A 5: 5,694,432 (GRCm39) A143V probably damaging Het
Cldn14 T C 16: 93,716,192 (GRCm39) K218R probably damaging Het
Col5a3 T C 9: 20,706,954 (GRCm39) K714R unknown Het
Crybg2 A G 4: 133,809,745 (GRCm39) H1517R possibly damaging Het
Dagla A C 19: 10,233,728 (GRCm39) F382C probably damaging Het
Dixdc1 G A 9: 50,622,259 (GRCm39) A25V probably damaging Het
Dock6 A G 9: 21,750,496 (GRCm39) F473L possibly damaging Het
Eif5 T C 12: 111,506,713 (GRCm39) C102R probably damaging Het
Faiml A G 9: 99,114,527 (GRCm39) C121R probably damaging Het
Fhdc1 A G 3: 84,364,577 (GRCm39) V223A possibly damaging Het
Garin4 T C 1: 190,896,103 (GRCm39) D180G possibly damaging Het
Haghl A G 17: 26,004,060 (GRCm39) V8A possibly damaging Het
Ksr1 A G 11: 78,936,007 (GRCm39) probably null Het
Lama5 A C 2: 179,840,747 (GRCm39) Y584D probably damaging Het
Lgi4 C T 7: 30,767,253 (GRCm39) R427* probably null Het
Lrriq1 T A 10: 102,980,750 (GRCm39) S1462C probably damaging Het
Map3k4 C T 17: 12,480,157 (GRCm39) E682K probably damaging Het
Myo9b G A 8: 71,786,981 (GRCm39) R721Q probably benign Het
Nherf1 C T 11: 115,071,270 (GRCm39) R335C probably damaging Het
Nmnat2 C A 1: 152,950,474 (GRCm39) S53Y probably damaging Het
Or8b12i C A 9: 20,082,061 (GRCm39) G269W probably benign Het
Or8g34 G A 9: 39,373,226 (GRCm39) M166I probably benign Het
Pcsk7 C T 9: 45,827,322 (GRCm39) A363V probably damaging Het
Pdrg1 C T 2: 152,854,355 (GRCm39) G62R probably damaging Het
Pdzd7 A G 19: 45,033,862 (GRCm39) I74T possibly damaging Het
Plcb4 T C 2: 135,781,123 (GRCm39) probably benign Het
Pramel28 A G 4: 143,693,247 (GRCm39) V77A probably benign Het
Rnf25 A G 1: 74,635,047 (GRCm39) V135A possibly damaging Het
Rph3a A G 5: 121,118,212 (GRCm39) probably benign Het
Rsf1 CG CGACGGCGGTG 7: 97,229,115 (GRCm39) probably benign Het
Senp6 G A 9: 80,051,124 (GRCm39) A1134T probably benign Het
Slc1a6 G T 10: 78,650,448 (GRCm39) *562L probably null Het
Slc26a6 G A 9: 108,734,236 (GRCm39) V206I probably benign Het
Slc45a3 A G 1: 131,905,637 (GRCm39) E206G probably damaging Het
Smc1a T A X: 150,816,695 (GRCm39) Y516N probably damaging Het
Smpd3 A G 8: 106,984,039 (GRCm39) V560A probably benign Het
Spata31g1 A G 4: 42,972,946 (GRCm39) K760E probably benign Het
Ssc4d T C 5: 135,994,578 (GRCm39) T51A possibly damaging Het
Suco A G 1: 161,676,220 (GRCm39) I386T probably damaging Het
Tecta A T 9: 42,289,290 (GRCm39) M425K possibly damaging Het
Tmprss11e G A 5: 86,869,266 (GRCm39) R96W probably damaging Het
Trim63 T C 4: 134,050,308 (GRCm39) probably benign Het
Trpv1 A G 11: 73,145,675 (GRCm39) K403R probably damaging Het
Ttc39d A G 17: 80,524,982 (GRCm39) Y547C probably damaging Het
Unc79 C T 12: 102,957,684 (GRCm39) T33I probably damaging Het
Usp47 G A 7: 111,681,743 (GRCm39) S518N probably damaging Het
Vmn2r22 T A 6: 123,614,594 (GRCm39) D332V probably damaging Het
Vmn2r55 A G 7: 12,385,832 (GRCm39) L716P probably damaging Het
Zfp558 T C 9: 18,367,924 (GRCm39) N288S possibly damaging Het
Other mutations in Gpatch8
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00577:Gpatch8 APN 11 102,369,704 (GRCm39) missense probably damaging 1.00
IGL00590:Gpatch8 APN 11 102,371,375 (GRCm39) missense unknown
IGL00835:Gpatch8 APN 11 102,369,375 (GRCm39) missense probably damaging 1.00
IGL00971:Gpatch8 APN 11 102,370,743 (GRCm39) missense unknown
IGL01395:Gpatch8 APN 11 102,371,534 (GRCm39) missense unknown
IGL02386:Gpatch8 APN 11 102,398,983 (GRCm39) missense unknown
IGL02476:Gpatch8 APN 11 102,369,417 (GRCm39) missense probably damaging 1.00
IGL02809:Gpatch8 APN 11 102,378,416 (GRCm39) missense unknown
IGL02985:Gpatch8 APN 11 102,372,336 (GRCm39) missense unknown
IGL03013:Gpatch8 APN 11 102,399,023 (GRCm39) missense unknown
PIT4810001:Gpatch8 UTSW 11 102,372,668 (GRCm39) missense unknown
R0332:Gpatch8 UTSW 11 102,372,668 (GRCm39) missense unknown
R0464:Gpatch8 UTSW 11 102,371,712 (GRCm39) missense unknown
R0710:Gpatch8 UTSW 11 102,372,759 (GRCm39) missense unknown
R0734:Gpatch8 UTSW 11 102,372,226 (GRCm39) missense unknown
R1458:Gpatch8 UTSW 11 102,372,055 (GRCm39) missense unknown
R1919:Gpatch8 UTSW 11 102,398,968 (GRCm39) critical splice donor site probably null
R2007:Gpatch8 UTSW 11 102,391,657 (GRCm39) missense unknown
R2495:Gpatch8 UTSW 11 102,369,307 (GRCm39) missense probably damaging 1.00
R2881:Gpatch8 UTSW 11 102,370,743 (GRCm39) missense unknown
R4672:Gpatch8 UTSW 11 102,369,784 (GRCm39) missense probably damaging 1.00
R4903:Gpatch8 UTSW 11 102,370,959 (GRCm39) missense unknown
R4931:Gpatch8 UTSW 11 102,372,050 (GRCm39) missense unknown
R5230:Gpatch8 UTSW 11 102,370,404 (GRCm39) missense probably damaging 1.00
R5288:Gpatch8 UTSW 11 102,399,053 (GRCm39) splice site probably null
R5384:Gpatch8 UTSW 11 102,399,053 (GRCm39) splice site probably null
R5386:Gpatch8 UTSW 11 102,399,053 (GRCm39) splice site probably null
R5564:Gpatch8 UTSW 11 102,429,111 (GRCm39) missense unknown
R5668:Gpatch8 UTSW 11 102,391,693 (GRCm39) missense unknown
R5954:Gpatch8 UTSW 11 102,371,767 (GRCm39) missense unknown
R5966:Gpatch8 UTSW 11 102,371,058 (GRCm39) missense unknown
R6018:Gpatch8 UTSW 11 102,371,741 (GRCm39) missense unknown
R6176:Gpatch8 UTSW 11 102,378,350 (GRCm39) missense unknown
R6388:Gpatch8 UTSW 11 102,369,314 (GRCm39) missense probably damaging 1.00
R7153:Gpatch8 UTSW 11 102,371,014 (GRCm39) small insertion probably benign
R7155:Gpatch8 UTSW 11 102,371,014 (GRCm39) small insertion probably benign
R7163:Gpatch8 UTSW 11 102,371,014 (GRCm39) small insertion probably benign
R7238:Gpatch8 UTSW 11 102,369,354 (GRCm39) missense probably damaging 1.00
R7407:Gpatch8 UTSW 11 102,370,656 (GRCm39) missense unknown
R7825:Gpatch8 UTSW 11 102,372,268 (GRCm39) missense unknown
R8205:Gpatch8 UTSW 11 102,371,213 (GRCm39) missense unknown
R8241:Gpatch8 UTSW 11 102,378,347 (GRCm39) missense unknown
R8805:Gpatch8 UTSW 11 102,371,018 (GRCm39) missense unknown
R8847:Gpatch8 UTSW 11 102,372,010 (GRCm39) missense unknown
R9156:Gpatch8 UTSW 11 102,370,299 (GRCm39) missense probably benign 0.22
Z1088:Gpatch8 UTSW 11 102,371,771 (GRCm39) missense unknown
Predicted Primers PCR Primer
(F):5'- GGCATCATTTACATCCTCAGTGC -3'
(R):5'- GTTTAGTCCCGGAAAGGAGG -3'

Sequencing Primer
(F):5'- TTACATCCTCAGTGCTTCAAAAACAG -3'
(R):5'- GGATCGGATGGAAGCTGTG -3'
Posted On 2015-02-05