Incidental Mutation 'R3026:Vmn1r202'
ID |
265825 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r202
|
Ensembl Gene |
ENSMUSG00000094379 |
Gene Name |
vomeronasal 1 receptor 202 |
Synonyms |
V1ri7 |
MMRRC Submission |
040542-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.088)
|
Stock # |
R3026 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
13 |
Chromosomal Location |
22685507-22686415 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to T
at 22685932 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Isoleucine
at position 162
(V162I)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154314
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000078642]
[ENSMUST00000228020]
|
AlphaFold |
Q8R259 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000078642
AA Change: V162I
PolyPhen 2
Score 0.026 (Sensitivity: 0.95; Specificity: 0.81)
|
SMART Domains |
Protein: ENSMUSP00000077711 Gene: ENSMUSG00000094379 AA Change: V162I
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
5 |
301 |
2.2e-11 |
PFAM |
Pfam:V1R
|
35 |
300 |
5.6e-44 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000228020
AA Change: V162I
PolyPhen 2
Score 0.026 (Sensitivity: 0.95; Specificity: 0.81)
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.7%
- 10x: 97.4%
- 20x: 95.5%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 20 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
BC051665 |
T |
A |
13: 60,932,521 (GRCm39) |
N55Y |
probably damaging |
Het |
Cdh19 |
T |
C |
1: 110,882,418 (GRCm39) |
T25A |
probably benign |
Het |
Eef1akmt1 |
A |
T |
14: 57,787,891 (GRCm39) |
S156T |
probably damaging |
Het |
Fsip1 |
T |
C |
2: 118,080,384 (GRCm39) |
H124R |
probably benign |
Het |
Gba2 |
C |
A |
4: 43,578,308 (GRCm39) |
A14S |
possibly damaging |
Het |
Iqgap2 |
T |
A |
13: 95,809,564 (GRCm39) |
|
probably null |
Het |
Kirrel1 |
C |
T |
3: 86,996,458 (GRCm39) |
M380I |
probably null |
Het |
Mapk8ip2 |
C |
T |
15: 89,345,649 (GRCm39) |
A803V |
probably damaging |
Het |
Mslnl |
G |
A |
17: 25,961,908 (GRCm39) |
V128M |
probably damaging |
Het |
Nav3 |
A |
G |
10: 109,660,465 (GRCm39) |
S702P |
probably damaging |
Het |
Nudt14 |
T |
C |
12: 112,905,612 (GRCm39) |
Q27R |
probably null |
Het |
Or51h1 |
T |
C |
7: 102,308,336 (GRCm39) |
F103L |
possibly damaging |
Het |
Pdilt |
T |
A |
7: 119,114,177 (GRCm39) |
Q107L |
probably benign |
Het |
Rasgrp3 |
T |
C |
17: 75,831,916 (GRCm39) |
V579A |
possibly damaging |
Het |
Rasl11a |
G |
A |
5: 146,784,187 (GRCm39) |
V211I |
probably benign |
Het |
Rsf1 |
G |
GACGGCGGCC |
7: 97,229,116 (GRCm39) |
|
probably benign |
Het |
Shoc1 |
A |
G |
4: 59,062,656 (GRCm39) |
S867P |
possibly damaging |
Het |
Spc24 |
AGAGGTAGTCACTGA |
AGA |
9: 21,667,511 (GRCm39) |
|
probably null |
Het |
Synj1 |
A |
T |
16: 90,775,622 (GRCm39) |
D385E |
probably damaging |
Het |
Usp48 |
A |
G |
4: 137,321,755 (GRCm39) |
E49G |
probably benign |
Het |
|
Other mutations in Vmn1r202 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01472:Vmn1r202
|
APN |
13 |
22,686,159 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL01516:Vmn1r202
|
APN |
13 |
22,685,632 (GRCm39) |
missense |
possibly damaging |
0.57 |
IGL01722:Vmn1r202
|
APN |
13 |
22,685,890 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02641:Vmn1r202
|
APN |
13 |
22,686,274 (GRCm39) |
missense |
probably benign |
0.34 |
IGL02863:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02876:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02891:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02943:Vmn1r202
|
APN |
13 |
22,686,364 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03057:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03114:Vmn1r202
|
APN |
13 |
22,685,500 (GRCm39) |
utr 3 prime |
probably benign |
|
IGL03114:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03143:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03159:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03097:Vmn1r202
|
UTSW |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
R0611:Vmn1r202
|
UTSW |
13 |
22,685,824 (GRCm39) |
missense |
probably damaging |
1.00 |
R1350:Vmn1r202
|
UTSW |
13 |
22,685,886 (GRCm39) |
missense |
probably benign |
0.04 |
R1666:Vmn1r202
|
UTSW |
13 |
22,685,540 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1668:Vmn1r202
|
UTSW |
13 |
22,685,540 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1803:Vmn1r202
|
UTSW |
13 |
22,686,313 (GRCm39) |
missense |
probably benign |
0.00 |
R2035:Vmn1r202
|
UTSW |
13 |
22,685,772 (GRCm39) |
missense |
probably damaging |
0.98 |
R2112:Vmn1r202
|
UTSW |
13 |
22,685,904 (GRCm39) |
missense |
possibly damaging |
0.76 |
R2145:Vmn1r202
|
UTSW |
13 |
22,685,953 (GRCm39) |
missense |
possibly damaging |
0.79 |
R3808:Vmn1r202
|
UTSW |
13 |
22,686,070 (GRCm39) |
missense |
possibly damaging |
0.83 |
R4714:Vmn1r202
|
UTSW |
13 |
22,685,977 (GRCm39) |
missense |
probably damaging |
1.00 |
R5016:Vmn1r202
|
UTSW |
13 |
22,686,375 (GRCm39) |
missense |
probably damaging |
1.00 |
R5124:Vmn1r202
|
UTSW |
13 |
22,685,920 (GRCm39) |
missense |
probably benign |
0.01 |
R6136:Vmn1r202
|
UTSW |
13 |
22,685,632 (GRCm39) |
missense |
possibly damaging |
0.90 |
R6365:Vmn1r202
|
UTSW |
13 |
22,686,374 (GRCm39) |
missense |
probably benign |
0.12 |
R6982:Vmn1r202
|
UTSW |
13 |
22,685,917 (GRCm39) |
missense |
probably benign |
0.02 |
R7293:Vmn1r202
|
UTSW |
13 |
22,685,872 (GRCm39) |
missense |
probably benign |
0.00 |
R7502:Vmn1r202
|
UTSW |
13 |
22,686,188 (GRCm39) |
missense |
probably damaging |
1.00 |
R7603:Vmn1r202
|
UTSW |
13 |
22,685,790 (GRCm39) |
missense |
probably damaging |
1.00 |
R7672:Vmn1r202
|
UTSW |
13 |
22,685,850 (GRCm39) |
missense |
probably benign |
0.45 |
R7822:Vmn1r202
|
UTSW |
13 |
22,686,241 (GRCm39) |
missense |
probably damaging |
1.00 |
R7954:Vmn1r202
|
UTSW |
13 |
22,685,871 (GRCm39) |
missense |
probably benign |
0.01 |
R8026:Vmn1r202
|
UTSW |
13 |
22,686,314 (GRCm39) |
missense |
possibly damaging |
0.65 |
R8419:Vmn1r202
|
UTSW |
13 |
22,685,985 (GRCm39) |
missense |
probably damaging |
1.00 |
R9079:Vmn1r202
|
UTSW |
13 |
22,685,602 (GRCm39) |
missense |
probably benign |
0.00 |
R9194:Vmn1r202
|
UTSW |
13 |
22,686,316 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
Predicted Primers |
PCR Primer
(F):5'- TAGAGGACACGCTTGTGATGC -3'
(R):5'- TAGGAGTCAGAACCATAGCCATG -3'
Sequencing Primer
(F):5'- GACACGCTTGTGATGCTTATACAG -3'
(R):5'- ACCTGTCTCCTCAGTGTGG -3'
|
Posted On |
2015-02-05 |