Incidental Mutation 'R3420:Amn1'
ID |
267010 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Amn1
|
Ensembl Gene |
ENSMUSG00000068250 |
Gene Name |
antagonist of mitotic exit network 1 |
Synonyms |
C730024G19Rik |
MMRRC Submission |
040638-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.087)
|
Stock # |
R3420 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
6 |
Chromosomal Location |
149059075-149090210 bp(-) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
A to T
at 149070950 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Leucine to Stop codon
at position 196
(L196*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000107160
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000095319]
[ENSMUST00000111535]
[ENSMUST00000141346]
|
AlphaFold |
B8JKV0 |
Predicted Effect |
probably null
Transcript: ENSMUST00000095319
AA Change: L153*
|
SMART Domains |
Protein: ENSMUSP00000092957 Gene: ENSMUSG00000068250 AA Change: L153*
Domain | Start | End | E-Value | Type |
LRR
|
17 |
41 |
2.82e0 |
SMART |
LRR
|
42 |
70 |
1.52e2 |
SMART |
LRR
|
71 |
96 |
1.25e-1 |
SMART |
LRR
|
97 |
122 |
3.89e-3 |
SMART |
LRR
|
123 |
147 |
1.44e1 |
SMART |
LRR
|
150 |
175 |
1.28e1 |
SMART |
Blast:LRR
|
176 |
204 |
3e-10 |
BLAST |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000111535
AA Change: L196*
|
SMART Domains |
Protein: ENSMUSP00000107160 Gene: ENSMUSG00000068250 AA Change: L196*
Domain | Start | End | E-Value | Type |
LRR
|
60 |
84 |
2.82e0 |
SMART |
LRR
|
85 |
113 |
1.52e2 |
SMART |
LRR
|
114 |
139 |
1.25e-1 |
SMART |
LRR
|
140 |
165 |
3.89e-3 |
SMART |
LRR
|
166 |
190 |
1.44e1 |
SMART |
LRR
|
193 |
218 |
1.28e1 |
SMART |
Blast:LRR
|
219 |
247 |
4e-10 |
BLAST |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000127743
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000134181
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000141346
|
SMART Domains |
Protein: ENSMUSP00000116060 Gene: ENSMUSG00000068250
Domain | Start | End | E-Value | Type |
LRR
|
17 |
41 |
2.82e0 |
SMART |
LRR
|
42 |
70 |
1.52e2 |
SMART |
LRR
|
71 |
96 |
1.25e-1 |
SMART |
LRR
|
97 |
121 |
1.44e1 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000149149
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000150610
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000152062
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000203043
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000156864
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000204681
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.4%
- 20x: 95.3%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 28 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Agbl3 |
A |
G |
6: 34,770,900 (GRCm39) |
T132A |
probably benign |
Het |
Ccdc73 |
A |
T |
2: 104,782,292 (GRCm39) |
K216M |
probably null |
Het |
Ccdc73 |
G |
A |
2: 104,782,293 (GRCm39) |
|
probably null |
Het |
Celsr2 |
A |
G |
3: 108,321,732 (GRCm39) |
V360A |
probably benign |
Het |
Ckap5 |
T |
A |
2: 91,400,597 (GRCm39) |
W650R |
probably damaging |
Het |
Cyp2b9 |
G |
A |
7: 25,909,528 (GRCm39) |
G432E |
probably damaging |
Het |
Dclre1b |
A |
G |
3: 103,715,412 (GRCm39) |
Y29H |
probably damaging |
Het |
Enthd1 |
T |
C |
15: 80,444,225 (GRCm39) |
D110G |
probably damaging |
Het |
Grin1 |
C |
T |
2: 25,193,926 (GRCm39) |
G390D |
probably damaging |
Het |
Hoxc6 |
T |
A |
15: 102,919,327 (GRCm39) |
W188R |
probably damaging |
Het |
Kcnip1 |
A |
G |
11: 33,595,594 (GRCm39) |
V43A |
probably damaging |
Het |
Kifap3 |
T |
A |
1: 163,621,595 (GRCm39) |
I81N |
probably damaging |
Het |
Klb |
G |
A |
5: 65,529,485 (GRCm39) |
G338S |
probably damaging |
Het |
Mrc2 |
G |
A |
11: 105,239,257 (GRCm39) |
|
probably null |
Het |
Nuak2 |
A |
G |
1: 132,259,818 (GRCm39) |
D532G |
probably benign |
Het |
Or8d1 |
A |
G |
9: 38,766,621 (GRCm39) |
K88E |
possibly damaging |
Het |
Prps2 |
G |
A |
X: 166,165,504 (GRCm39) |
|
probably null |
Het |
Prss23 |
C |
A |
7: 89,159,107 (GRCm39) |
V321L |
possibly damaging |
Het |
Psmb2 |
T |
C |
4: 126,571,630 (GRCm39) |
M28T |
probably damaging |
Het |
Ric1 |
T |
C |
19: 29,544,990 (GRCm39) |
I230T |
probably damaging |
Het |
Slc25a17 |
C |
T |
15: 81,244,901 (GRCm39) |
V11I |
probably benign |
Het |
Slc5a4a |
T |
C |
10: 76,012,407 (GRCm39) |
V359A |
probably benign |
Het |
Slco1a5 |
A |
T |
6: 142,213,964 (GRCm39) |
D52E |
possibly damaging |
Het |
Tafa1 |
C |
A |
6: 96,626,099 (GRCm39) |
D112E |
probably damaging |
Het |
Tlr4 |
A |
G |
4: 66,757,773 (GRCm39) |
I189V |
probably benign |
Het |
Washc1 |
T |
C |
17: 66,424,028 (GRCm39) |
S247P |
probably damaging |
Het |
Zdhhc14 |
T |
A |
17: 5,803,366 (GRCm39) |
*490R |
probably null |
Het |
Zfp217 |
A |
G |
2: 169,961,937 (GRCm39) |
F130S |
possibly damaging |
Het |
|
Other mutations in Amn1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02391:Amn1
|
APN |
6 |
149,070,944 (GRCm39) |
critical splice donor site |
probably null |
|
PIT4453001:Amn1
|
UTSW |
6 |
149,072,357 (GRCm39) |
missense |
probably benign |
0.00 |
R0153:Amn1
|
UTSW |
6 |
149,090,091 (GRCm39) |
utr 5 prime |
probably benign |
|
R0494:Amn1
|
UTSW |
6 |
149,086,634 (GRCm39) |
unclassified |
probably benign |
|
R0557:Amn1
|
UTSW |
6 |
149,072,503 (GRCm39) |
missense |
possibly damaging |
0.50 |
R0717:Amn1
|
UTSW |
6 |
149,084,970 (GRCm39) |
missense |
possibly damaging |
0.88 |
R0736:Amn1
|
UTSW |
6 |
149,084,970 (GRCm39) |
missense |
possibly damaging |
0.88 |
R3421:Amn1
|
UTSW |
6 |
149,070,950 (GRCm39) |
nonsense |
probably null |
|
R4466:Amn1
|
UTSW |
6 |
149,068,343 (GRCm39) |
splice site |
probably null |
|
R4760:Amn1
|
UTSW |
6 |
149,086,611 (GRCm39) |
missense |
probably benign |
|
R5294:Amn1
|
UTSW |
6 |
149,086,622 (GRCm39) |
unclassified |
probably benign |
|
R5356:Amn1
|
UTSW |
6 |
149,068,392 (GRCm39) |
missense |
possibly damaging |
0.80 |
R5561:Amn1
|
UTSW |
6 |
149,086,522 (GRCm39) |
missense |
probably damaging |
0.98 |
R7501:Amn1
|
UTSW |
6 |
149,086,529 (GRCm39) |
missense |
probably benign |
0.19 |
R7564:Amn1
|
UTSW |
6 |
149,086,529 (GRCm39) |
missense |
probably benign |
0.19 |
R7643:Amn1
|
UTSW |
6 |
149,086,529 (GRCm39) |
missense |
probably benign |
0.19 |
R7645:Amn1
|
UTSW |
6 |
149,086,529 (GRCm39) |
missense |
probably benign |
0.19 |
R8097:Amn1
|
UTSW |
6 |
149,070,853 (GRCm39) |
unclassified |
probably benign |
|
R9390:Amn1
|
UTSW |
6 |
149,084,983 (GRCm39) |
missense |
probably damaging |
1.00 |
R9565:Amn1
|
UTSW |
6 |
149,090,103 (GRCm39) |
start gained |
probably benign |
|
X0064:Amn1
|
UTSW |
6 |
149,072,533 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TCGCAGCAGGTTATCTCAGG -3'
(R):5'- GCCCCTAACTCAGAACAATGTATTTG -3'
Sequencing Primer
(F):5'- AGCAGGTTATCTCAGGTTTGTTGTAC -3'
(R):5'- AGGGGCATTGAACTCACTCTTAG -3'
|
Posted On |
2015-02-18 |