|Institutional Source||Beutler Lab|
|Gene Name||protein tyrosine phosphatase, receptor type, Q|
|Is this an essential gene?||Possibly essential (E-score: 0.513)|
|Stock #||R3423 (G1)|
|Chromosomal Location||107517049-107720051 bp(-) (GRCm38)|
|Type of Mutation||missense|
|DNA Base Change (assembly)||C to T at 107582476 bp|
|Amino Acid Change||Alanine to Threonine at position 1680 (A1680T)|
|Ref Sequence||ENSEMBL: ENSMUSP00000058572 (fasta)|
|Gene Model||predicted gene model for transcript(s): [ENSMUST00000050702]|
|Predicted Effect||probably damaging
AA Change: A1680T
PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)
AA Change: A1680T
|Meta Mutation Damage Score||0.1303|
|Coding Region Coverage||
|Validation Efficiency||100% (38/38)|
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This locus encodes a member of the type III receptor-like protein-tyrosine phosphatase family. The encoded protein catalyzes the dephosphorylation of phosphotyrosine and phosphatidylinositol and plays roles in cellular proliferation and differentiation. Mutations at this locus have been linked to autosomal recessive deafness. [provided by RefSeq, Mar 2014]
PHENOTYPE: Homozygotes for targeted mutations show absence of shaft connectors from vestibular hair bundles, postnatal degeneration in cochlear hair-bundle structure, reduced transducer currents but otherwise normal adaptation properties, a progressive loss of basal-coil cochlear hair cells, and deafness. [provided by MGI curators]
|Allele List at MGI|
|Other mutations in this stock||
|Other mutations in Ptprq||
(F):5'- GACTTGGGCCCTTAGCAAAC -3'
(R):5'- CTGGGAAATACAGTCAATGCCTG -3'
(F):5'- TTGGGCCCTTAGCAAACAGTTAC -3'
(R):5'- CAATGCCTGACCATTTTTCTAATG -3'