Mutagenetix > Incidental Mutation

Incidental Mutation 'R3522:4931409K22Rik'

267531

Institutional Source

Beutler Lab

Gene Symbol

4931409K22Rik

Ensembl Gene

ENSMUSG00000038199

Gene Name

RIKEN cDNA 4931409K22 gene

Synonyms

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.162) question?

Stock #

R3522 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

24543432-24556809 bp(-) (GRCm38)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

A to G at 24549626 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000085642 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000088302] [ENSMUST00000088302] [ENSMUST00000198887] [ENSMUST00000200634]

AlphaFold

A6H690

Predicted Effect

probably null
Transcript: ENSMUST00000088302

SMART Domains

Protein: ENSMUSP00000085642
Gene: ENSMUSG00000038199

Domain	Start	End	E-Value	Type
low complexity region	46	54	N/A	INTRINSIC
low complexity region	70	77	N/A	INTRINSIC
low complexity region	184	198	N/A	INTRINSIC
IQ	205	227	7.58e-2	SMART
coiled coil region	335	382	N/A	INTRINSIC
coiled coil region	429	450	N/A	INTRINSIC
low complexity region	467	484	N/A	INTRINSIC
Pfam:AAA	568	700	1.6e-14	PFAM
low complexity region	819	825	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000088302

SMART Domains

Protein: ENSMUSP00000085642
Gene: ENSMUSG00000038199

Domain	Start	End	E-Value	Type
low complexity region	46	54	N/A	INTRINSIC
low complexity region	70	77	N/A	INTRINSIC
low complexity region	184	198	N/A	INTRINSIC
IQ	205	227	7.58e-2	SMART
coiled coil region	335	382	N/A	INTRINSIC
coiled coil region	429	450	N/A	INTRINSIC
low complexity region	467	484	N/A	INTRINSIC
Pfam:AAA	568	700	1.6e-14	PFAM
low complexity region	819	825	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000198709

Predicted Effect

probably benign
Transcript: ENSMUST00000198887

SMART Domains

Protein: ENSMUSP00000142918
Gene: ENSMUSG00000038199

Domain	Start	End	E-Value	Type
low complexity region	46	54	N/A	INTRINSIC
low complexity region	70	77	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000199185

Predicted Effect

probably benign
Transcript: ENSMUST00000200634

SMART Domains

Protein: ENSMUSP00000142624
Gene: ENSMUSG00000038199

Domain	Start	End	E-Value	Type
low complexity region	46	54	N/A	INTRINSIC
low complexity region	70	77	N/A	INTRINSIC
low complexity region	184	198	N/A	INTRINSIC

Meta Mutation Damage Score

0.9755

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 97.2%
20x: 94.8%

Validation Efficiency

100% (72/72)

Allele List at MGI

Other mutations in this stock

Total: 70 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ankrd35	A	G	3: 96,685,062	E888G	probably damaging	Het
Arhgef10	T	C	8: 14,954,918	F150S	probably damaging	Het
Atp10d	G	T	5: 72,239,157	R235L	probably benign	Het
Cacna1b	A	G	2: 24,763,043	V2A	possibly damaging	Het
Cand1	A	T	10: 119,239,197	L15Q	probably benign	Het
Cavin3	C	A	7: 105,481,143	G154V	probably benign	Het
Ccdc73	A	T	2: 104,991,485	D593V	probably damaging	Het
Cdk5rap2	T	C	4: 70,250,410	K161E	probably damaging	Het
Chil4	A	T	3: 106,203,740	N279K	probably benign	Het
Chst13	T	G	6: 90,318,263	D56A	probably damaging	Het
Cnn1	C	A	9: 22,099,368	H5N	probably benign	Het
Cpsf4l	T	A	11: 113,702,493	K88N	probably damaging	Het
Ctnnbl1	G	T	2: 157,871,193		probably null	Het
Dnah7a	A	C	1: 53,618,116	F834V	probably damaging	Het
Fbxo41	A	G	6: 85,484,181	S182P	probably benign	Het
Fkbp5	T	C	17: 28,415,996	T180A	probably benign	Het
Flg2	T	A	3: 93,220,027	I2082N	unknown	Het
Gm4968	A	G	6: 127,233,762		noncoding transcript	Het
Gpc5	T	A	14: 116,524,335	H612Q	probably benign	Het
Gsg1	A	T	6: 135,241,253	V212D	probably damaging	Het
Hipk1	A	G	3: 103,744,114	V1111A	probably damaging	Het
Hormad1	A	T	3: 95,576,285	Q136L	probably benign	Het
Ifi35	T	A	11: 101,457,685	S147R	probably benign	Het
Iqgap3	C	T	3: 88,090,782	A282V	probably null	Het
Jmy	T	C	13: 93,454,050	D515G	probably damaging	Het
Kctd10	G	A	5: 114,374,923	R64C	probably damaging	Het
Kidins220	T	C	12: 24,990,758	V121A	probably damaging	Het
Lcn3	G	A	2: 25,766,121	V63M	possibly damaging	Het
Lmx1b	T	A	2: 33,639,531	Y72F	probably benign	Het
Lrp1	T	C	10: 127,553,555	D3164G	probably damaging	Het
Mdh1b	C	T	1: 63,719,768	V222M	probably damaging	Het
Mst1	T	C	9: 108,081,503		probably benign	Het
Myo7b	C	A	18: 32,010,079	V189F	probably damaging	Het
Ndc1	T	C	4: 107,393,158	S533P	probably damaging	Het
Ndrg3	T	C	2: 156,944,027	D164G	probably damaging	Het
Nol11	C	T	11: 107,173,628	C500Y	possibly damaging	Het
Nsd3	A	G	8: 25,706,614	N1208D	probably benign	Het
Nup155	C	T	15: 8,156,678		probably benign	Het
Olfr768	A	G	10: 129,093,842	I44T	possibly damaging	Het
Olfr911-ps1	A	G	9: 38,523,785	T18A	probably damaging	Het
Olfr921	A	T	9: 38,775,720	D155V	possibly damaging	Het
Olfr988	A	T	2: 85,353,003	C308S	probably benign	Het
Phf3	A	G	1: 30,805,603	L1425P	probably damaging	Het
Pla2r1	A	G	2: 60,448,906	Y777H	probably damaging	Het
Pld1	A	G	3: 28,031,247	E184G	probably damaging	Het
Plxna1	T	C	6: 89,337,353		probably null	Het
Ptgfrn	T	C	3: 101,043,402	E865G	probably damaging	Het
Ptpn13	G	T	5: 103,589,854		probably benign	Het
Pygb	G	T	2: 150,828,553	V763F	probably benign	Het
Ros1	A	C	10: 52,090,995	Y1705*	probably null	Het
Sec61a2	A	G	2: 5,893,216	F5L	probably benign	Het
Skint5	A	G	4: 113,756,905		probably null	Het
Sntg2	A	G	12: 30,312,567	V60A	probably damaging	Het
Sppl2a	A	G	2: 126,920,322	C280R	possibly damaging	Het
Srrm4	A	C	5: 116,446,544	M1R	probably null	Het
Sult1c1	T	C	17: 53,972,015	E91G	probably damaging	Het
Themis2	C	G	4: 132,785,595	R440P	probably damaging	Het
Tmem229a	A	G	6: 24,955,059	L232P	probably benign	Het
Trappc1	T	C	11: 69,324,422	F43L	probably damaging	Het
Trappc11	A	T	8: 47,498,673	Y982N	possibly damaging	Het
Trpv6	A	T	6: 41,627,405	M139K	probably damaging	Het
Txnrd3	A	G	6: 89,663,075		probably null	Het
Vmn1r184	T	A	7: 26,267,583	Y251*	probably null	Het
Vmn1r216	A	G	13: 23,099,374	N76D	possibly damaging	Het
Vmn1r71	C	A	7: 10,747,865	V233F	probably benign	Het
Vps13a	A	C	19: 16,766,493		probably benign	Het
Vwa5b2	A	G	16: 20,601,608	S756G	probably damaging	Het
Wdr36	T	A	18: 32,861,485		probably null	Het
Wdr86	A	G	5: 24,718,307	V129A	probably benign	Het
Zfyve9	A	G	4: 108,719,743	L47S	probably benign	Het

Other mutations in 4931409K22Rik

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01383:4931409K22Rik	APN	5	24548294	missense	probably benign	0.03
IGL02110:4931409K22Rik	APN	5	24548084	splice site	probably benign
R0329:4931409K22Rik	UTSW	5	24545785	splice site	probably null
R0492:4931409K22Rik	UTSW	5	24554628	missense	probably damaging	1.00
R0585:4931409K22Rik	UTSW	5	24550723	missense	probably benign
R0656:4931409K22Rik	UTSW	5	24549762	missense	possibly damaging	0.67
R0894:4931409K22Rik	UTSW	5	24550733	splice site	probably null
R1546:4931409K22Rik	UTSW	5	24555428	splice site	probably null
R1642:4931409K22Rik	UTSW	5	24552688	missense	probably damaging	1.00
R1998:4931409K22Rik	UTSW	5	24545006	missense	probably benign	0.01
R2090:4931409K22Rik	UTSW	5	24550676	missense	probably benign	0.15
R2186:4931409K22Rik	UTSW	5	24554526	missense	probably damaging	1.00
R2237:4931409K22Rik	UTSW	5	24548294	missense	probably benign	0.03
R2256:4931409K22Rik	UTSW	5	24552040	utr 3 prime	probably benign
R2257:4931409K22Rik	UTSW	5	24552040	utr 3 prime	probably benign
R3078:4931409K22Rik	UTSW	5	24546666	missense	probably benign
R3910:4931409K22Rik	UTSW	5	24545442	splice site	probably benign
R3911:4931409K22Rik	UTSW	5	24545442	splice site	probably benign
R4333:4931409K22Rik	UTSW	5	24544370	missense	probably damaging	1.00
R4335:4931409K22Rik	UTSW	5	24544370	missense	probably damaging	1.00
R4500:4931409K22Rik	UTSW	5	24548277	missense	possibly damaging	0.85
R4761:4931409K22Rik	UTSW	5	24551983	missense	probably benign
R4773:4931409K22Rik	UTSW	5	24550598	critical splice donor site	probably null
R4880:4931409K22Rik	UTSW	5	24549752	missense	probably benign
R5614:4931409K22Rik	UTSW	5	24550142	missense	probably benign	0.03
R5839:4931409K22Rik	UTSW	5	24552026	missense	probably damaging	0.98
R5847:4931409K22Rik	UTSW	5	24544166	missense	probably benign	0.16
R7061:4931409K22Rik	UTSW	5	24545065	missense	probably benign	0.00
R7131:4931409K22Rik	UTSW	5	24548956	missense	possibly damaging	0.81
R7156:4931409K22Rik	UTSW	5	24552650	missense	probably benign	0.05
R7248:4931409K22Rik	UTSW	5	24544271	missense	probably benign	0.00
R7480:4931409K22Rik	UTSW	5	24546906	missense	probably damaging	1.00
R7693:4931409K22Rik	UTSW	5	24546628	missense	probably benign	0.01
R7782:4931409K22Rik	UTSW	5	24544226	missense	probably damaging	0.98
R7814:4931409K22Rik	UTSW	5	24545422	missense	possibly damaging	0.95
R7898:4931409K22Rik	UTSW	5	24553645	missense	probably damaging	1.00
R8024:4931409K22Rik	UTSW	5	24550636	missense	possibly damaging	0.70
R8172:4931409K22Rik	UTSW	5	24543610	missense	probably benign
R8281:4931409K22Rik	UTSW	5	24549010	missense	probably benign	0.02
R8511:4931409K22Rik	UTSW	5	24545908	missense	possibly damaging	0.95
R8888:4931409K22Rik	UTSW	5	24550630	missense	probably benign	0.20
R8895:4931409K22Rik	UTSW	5	24550630	missense	probably benign	0.20
R9246:4931409K22Rik	UTSW	5	24548971	missense	probably benign	0.22
R9450:4931409K22Rik	UTSW	5	24549449	missense	probably benign	0.13
X0063:4931409K22Rik	UTSW	5	24549765	splice site	probably null
Z1177:4931409K22Rik	UTSW	5	24550795	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- GGCAGCACTCTGAACATCAC -3'
(R):5'- AGTTTGCCAAGGCTGTGAGAC -3'

Sequencing Primer
(F):5'- CACTTCTGGCTCCTAGAATGGAAAG -3'
(R):5'- ACGCAGCTGGGTTCATTC -3'

Posted On

2015-02-18