Incidental Mutation 'R3745:Vmn1r66'
ID 271164
Institutional Source Beutler Lab
Gene Symbol Vmn1r66
Ensembl Gene ENSMUSG00000043066
Gene Name vomeronasal 1 receptor 66
Synonyms V1re11
MMRRC Submission 040731-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.075) question?
Stock # R3745 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 10007755-10009278 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 10008248 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Alanine to Threonine at position 262 (A262T)
Ref Sequence ENSEMBL: ENSMUSP00000153860 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000060374] [ENSMUST00000227719] [ENSMUST00000228086] [ENSMUST00000228622]
AlphaFold Q8K4I0
Predicted Effect possibly damaging
Transcript: ENSMUST00000060374
AA Change: A262T

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000055861
Gene: ENSMUSG00000043066
AA Change: A262T

DomainStartEndE-ValueType
Pfam:V1R 39 295 4.5e-28 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000226202
Predicted Effect possibly damaging
Transcript: ENSMUST00000227719
AA Change: A262T

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Predicted Effect possibly damaging
Transcript: ENSMUST00000228086
AA Change: A262T

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Predicted Effect possibly damaging
Transcript: ENSMUST00000228622
AA Change: A262T

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Meta Mutation Damage Score 0.1188 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 94.8%
Validation Efficiency 98% (44/45)
Allele List at MGI
Other mutations in this stock
Total: 44 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700012B07Rik G T 11: 109,684,980 (GRCm39) C172* probably null Het
Acot9 G A X: 154,054,941 (GRCm39) probably benign Het
Akap10 A G 11: 61,806,131 (GRCm39) V199A probably benign Het
Aox4 C T 1: 58,285,029 (GRCm39) H594Y probably damaging Het
Arhgap35 A T 7: 16,297,647 (GRCm39) Y473N probably damaging Het
Aspn G A 13: 49,720,036 (GRCm39) E351K probably damaging Het
Astn1 G T 1: 158,329,630 (GRCm39) A162S probably damaging Het
Atosa T C 9: 74,917,144 (GRCm39) V581A probably benign Het
Auts2 A G 5: 131,505,425 (GRCm39) probably benign Het
Cog6 A T 3: 52,900,240 (GRCm39) M507K probably benign Het
Crct1 C A 3: 92,922,014 (GRCm39) probably benign Het
Cyp2d11 A C 15: 82,276,056 (GRCm39) I175S probably benign Het
Dclk1 A G 3: 55,154,863 (GRCm39) N98D possibly damaging Het
Erich5 T A 15: 34,470,878 (GRCm39) C36S probably damaging Het
F5 A G 1: 164,014,348 (GRCm39) I540V possibly damaging Het
Fam20a A T 11: 109,568,616 (GRCm39) S303R probably benign Het
Fat3 G A 9: 15,909,567 (GRCm39) S2145F probably damaging Het
Gbp9 C A 5: 105,253,724 (GRCm39) probably benign Het
Gm6408 G T 5: 146,421,246 (GRCm39) V292F probably damaging Het
Kmt2a A G 9: 44,742,637 (GRCm39) probably benign Het
Lrriq1 T C 10: 103,006,717 (GRCm39) D1136G probably damaging Het
Macrod2 C A 2: 141,652,549 (GRCm39) T204K probably damaging Het
Mlkl A G 8: 112,042,199 (GRCm39) probably benign Het
Msantd1 T A 5: 35,080,811 (GRCm39) V155E possibly damaging Het
Myo3b A G 2: 70,064,829 (GRCm39) probably benign Het
Nbn T A 4: 15,976,163 (GRCm39) C375S possibly damaging Het
Nell2 A C 15: 95,330,554 (GRCm39) C231W probably damaging Het
Nipbl A G 15: 8,388,358 (GRCm39) S421P probably benign Het
Npr3 A T 15: 11,905,577 (GRCm39) V50E probably damaging Het
Or4d10 A G 19: 12,051,744 (GRCm39) L84P probably damaging Het
Pclo T C 5: 14,728,435 (GRCm39) probably benign Het
Pkn3 A G 2: 29,980,353 (GRCm39) K785R probably damaging Het
Ppef2 T A 5: 92,387,010 (GRCm39) probably benign Het
Prdm10 T C 9: 31,251,703 (GRCm39) I357T possibly damaging Het
Prrc2c G A 1: 162,525,754 (GRCm39) T284I unknown Het
Psma3 T C 12: 71,025,522 (GRCm39) S13P possibly damaging Het
Ptch1 T G 13: 63,672,773 (GRCm39) E944A probably benign Het
Rpl6l T C 10: 110,962,226 (GRCm39) noncoding transcript Het
Tex11 A G X: 99,960,178 (GRCm39) V522A probably benign Het
Thsd7b A G 1: 129,605,978 (GRCm39) E573G probably benign Het
Tom1l1 A G 11: 90,548,567 (GRCm39) S259P probably benign Het
Trpm8 A G 1: 88,276,049 (GRCm39) E549G probably benign Het
Zc3h13 T A 14: 75,568,101 (GRCm39) D1131E probably benign Het
Zfp445 A C 9: 122,683,791 (GRCm39) D289E probably benign Het
Other mutations in Vmn1r66
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02957:Vmn1r66 APN 7 10,008,737 (GRCm39) missense probably damaging 1.00
IGL03236:Vmn1r66 APN 7 10,008,990 (GRCm39) missense probably damaging 0.98
R0380:Vmn1r66 UTSW 7 10,008,670 (GRCm39) missense probably benign 0.02
R1625:Vmn1r66 UTSW 7 10,008,316 (GRCm39) missense probably benign 0.00
R4081:Vmn1r66 UTSW 7 10,008,733 (GRCm39) missense probably damaging 1.00
R4389:Vmn1r66 UTSW 7 10,008,715 (GRCm39) nonsense probably null
R5081:Vmn1r66 UTSW 7 10,008,722 (GRCm39) missense probably damaging 1.00
R5909:Vmn1r66 UTSW 7 10,008,269 (GRCm39) missense probably benign 0.44
R6164:Vmn1r66 UTSW 7 10,008,329 (GRCm39) nonsense probably null
R6792:Vmn1r66 UTSW 7 10,008,412 (GRCm39) missense possibly damaging 0.78
R6843:Vmn1r66 UTSW 7 10,008,692 (GRCm39) missense probably damaging 1.00
R7013:Vmn1r66 UTSW 7 10,008,683 (GRCm39) missense possibly damaging 0.94
R7173:Vmn1r66 UTSW 7 10,008,482 (GRCm39) missense probably benign 0.00
R7400:Vmn1r66 UTSW 7 10,008,874 (GRCm39) missense probably damaging 0.99
R9092:Vmn1r66 UTSW 7 10,008,110 (GRCm39) missense possibly damaging 0.71
Z1176:Vmn1r66 UTSW 7 10,008,212 (GRCm39) missense probably benign 0.01
Predicted Primers PCR Primer
(F):5'- CTGAGGAGTTCAATTCTCTGCATTG -3'
(R):5'- AGTGGCTCTATGACTGTCATTC -3'

Sequencing Primer
(F):5'- CTCTGCATTGAACTTTTGAGAAAG -3'
(R):5'- GGCTCTATGACTGTCATTCTATACAG -3'
Posted On 2015-03-18