Incidental Mutation 'IGL00949:Ptgfrn'
ID27125
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Ptgfrn
Ensembl Gene ENSMUSG00000027864
Gene Nameprostaglandin F2 receptor negative regulator
SynonymsCD9P-1, 4833445A08Rik
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #IGL00949
Quality Score
Status
Chromosome3
Chromosomal Location101040232-101110278 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to T at 101072845 bp
ZygosityHeterozygous
Amino Acid Change Methionine to Lysine at position 393 (M393K)
Ref Sequence ENSEMBL: ENSMUSP00000099755 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000102694]
Predicted Effect probably benign
Transcript: ENSMUST00000102694
AA Change: M393K

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)
SMART Domains Protein: ENSMUSP00000099755
Gene: ENSMUSG00000027864
AA Change: M393K

DomainStartEndE-ValueType
signal peptide 1 21 N/A INTRINSIC
IGv 38 121 3.01e-7 SMART
IG 154 264 1.54e-4 SMART
IG 284 390 1.11e-5 SMART
IG 414 532 1.72e-2 SMART
IG 556 676 9.71e-2 SMART
IG 696 822 5.21e-2 SMART
transmembrane domain 831 853 N/A INTRINSIC
low complexity region 862 872 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000198037
Predicted Effect noncoding transcript
Transcript: ENSMUST00000200065
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Homozygous mice for a null gene trap mutation exhibit a decreased depressive-like response during tail suspension testing when compared with their wild-type littermates, [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acsl4 A G X: 142,343,329 C303R probably damaging Het
Als2 C T 1: 59,215,572 G209S probably damaging Het
Ankrd11 T C 8: 122,908,728 T56A possibly damaging Het
Arnt T A 3: 95,487,268 I381N probably damaging Het
Atp13a1 T C 8: 69,800,003 probably benign Het
Cd180 A T 13: 102,693,760 T21S possibly damaging Het
Cdc27 T C 11: 104,529,403 Y138C probably damaging Het
Dhx16 A G 17: 35,887,934 T753A probably benign Het
Dnah1 A G 14: 31,307,090 M561T probably benign Het
Dsc3 C A 18: 19,985,631 G259C probably null Het
Enox2 A T X: 49,040,607 D346E probably benign Het
Exoc3l T C 8: 105,290,498 E619G probably benign Het
Exosc9 T C 3: 36,563,266 probably benign Het
Gmpr2 C T 14: 55,676,750 probably benign Het
Golga1 T C 2: 39,041,255 E289G probably damaging Het
Hist1h3a G A 13: 23,762,031 T108I probably damaging Het
Jmy A G 13: 93,454,002 V531A probably damaging Het
Lamp2 T C X: 38,435,473 N156S probably benign Het
Lrrn1 C A 6: 107,569,300 N686K probably benign Het
Lyst T C 13: 13,635,485 V580A possibly damaging Het
Ms4a8a C A 19: 11,079,444 L91F probably benign Het
Naip2 A G 13: 100,161,591 F646L probably damaging Het
Npat T C 9: 53,563,362 V818A probably benign Het
Olfr1362 A T 13: 21,611,351 I206N probably damaging Het
Padi3 C A 4: 140,788,943 R542L possibly damaging Het
Pid1 A G 1: 84,038,506 V46A probably damaging Het
Pld5 A T 1: 175,975,473 C409S probably damaging Het
Plet1 A G 9: 50,499,223 T105A possibly damaging Het
Polrmt T C 10: 79,737,597 probably null Het
Pp2d1 T C 17: 53,515,639 N133S probably benign Het
Prpf40b G T 15: 99,306,538 V228L probably benign Het
Slc9a1 C T 4: 133,416,451 T416I probably benign Het
Slc9c1 T C 16: 45,593,358 S950P probably benign Het
Slitrk1 A T 14: 108,911,809 V490D probably damaging Het
Th T C 7: 142,897,026 Y131C probably benign Het
Tlr6 A G 5: 64,953,512 L684P probably damaging Het
Tpm3 A G 3: 90,089,858 E234G probably damaging Het
Tti1 A G 2: 157,982,399 Y1045H probably benign Het
Txnl4b T A 8: 109,569,075 V37D probably benign Het
Ufl1 A T 4: 25,275,822 F194I probably damaging Het
Usp13 G A 3: 32,886,577 E412K possibly damaging Het
Usp46 A T 5: 74,003,242 L251Q possibly damaging Het
Other mutations in Ptgfrn
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01710:Ptgfrn APN 3 101073088 missense probably damaging 0.98
IGL02557:Ptgfrn APN 3 101060636 critical splice donor site probably null
IGL02740:Ptgfrn APN 3 101072937 missense possibly damaging 0.84
IGL02817:Ptgfrn APN 3 101060752 missense probably benign
IGL02948:Ptgfrn APN 3 101072819 missense probably benign 0.21
R1540:Ptgfrn UTSW 3 101060654 missense probably benign 0.41
R1563:Ptgfrn UTSW 3 101060651 missense possibly damaging 0.67
R1730:Ptgfrn UTSW 3 101056442 missense possibly damaging 0.71
R1766:Ptgfrn UTSW 3 101050122 missense probably benign 0.00
R1783:Ptgfrn UTSW 3 101056442 missense possibly damaging 0.71
R1918:Ptgfrn UTSW 3 101056307 missense probably benign
R2113:Ptgfrn UTSW 3 101077309 missense probably benign 0.00
R2290:Ptgfrn UTSW 3 101077361 missense possibly damaging 0.77
R3522:Ptgfrn UTSW 3 101043402 missense probably damaging 1.00
R5223:Ptgfrn UTSW 3 101045593 missense probably benign 0.13
R5600:Ptgfrn UTSW 3 101056250 missense probably damaging 0.99
R5642:Ptgfrn UTSW 3 101043362 missense probably damaging 1.00
R5927:Ptgfrn UTSW 3 101060652 missense possibly damaging 0.92
R5984:Ptgfrn UTSW 3 101050143 missense probably damaging 0.99
R6124:Ptgfrn UTSW 3 101073089 missense probably damaging 0.98
R6331:Ptgfrn UTSW 3 101045620 missense possibly damaging 0.64
R6363:Ptgfrn UTSW 3 101045578 missense possibly damaging 0.93
R6473:Ptgfrn UTSW 3 101045639 missense probably damaging 1.00
R6856:Ptgfrn UTSW 3 101045446 missense probably damaging 1.00
R7151:Ptgfrn UTSW 3 101080195 nonsense probably null
R7313:Ptgfrn UTSW 3 101073047 missense possibly damaging 0.84
R7361:Ptgfrn UTSW 3 101077444 missense probably benign 0.03
R7806:Ptgfrn UTSW 3 101077132 missense possibly damaging 0.50
R7823:Ptgfrn UTSW 3 101043409 missense probably damaging 1.00
R7841:Ptgfrn UTSW 3 101060810 missense probably damaging 0.98
R7924:Ptgfrn UTSW 3 101060810 missense probably damaging 0.98
Z1088:Ptgfrn UTSW 3 101056437 missense probably damaging 1.00
Posted On2013-04-17