Incidental Mutation 'IGL00978:Ifne'
ID27346
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Ifne
Ensembl Gene ENSMUSG00000045364
Gene Nameinterferon epsilon
SynonymsIfnt1, Ifne1
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #IGL00978
Quality Score
Status
Chromosome4
Chromosomal Location88879538-88880201 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 88880031 bp
ZygosityHeterozygous
Amino Acid Change Glutamine to Arginine at position 50 (Q50R)
Ref Sequence ENSEMBL: ENSMUSP00000059199 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000056014]
Predicted Effect probably benign
Transcript: ENSMUST00000056014
AA Change: Q50R

PolyPhen 2 Score 0.170 (Sensitivity: 0.92; Specificity: 0.87)
SMART Domains Protein: ENSMUSP00000059199
Gene: ENSMUSG00000045364
AA Change: Q50R

DomainStartEndE-ValueType
signal peptide 1 21 N/A INTRINSIC
low complexity region 37 51 N/A INTRINSIC
IFabd 58 175 2.09e-22 SMART
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit increased susceptibility to HSV-2 and Chlamydia infection. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 35 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
0610009L18Rik T C 11: 120,350,947 probably benign Het
Alpk2 A T 18: 65,291,534 probably benign Het
Angptl8 T C 9: 21,837,053 probably benign Het
AU040320 T A 4: 126,828,839 D383E probably benign Het
Cep97 C T 16: 55,924,960 probably benign Het
Clcn4 A T 7: 7,287,673 L649H probably damaging Het
Col5a2 T C 1: 45,376,739 N1416S probably benign Het
Erbb2 C T 11: 98,435,630 P1027S probably damaging Het
Eya1 A G 1: 14,270,701 probably benign Het
Gfm2 T C 13: 97,162,977 I402T probably benign Het
Gmeb2 A T 2: 181,259,043 V187E probably benign Het
Hectd1 T C 12: 51,791,390 H662R possibly damaging Het
Kidins220 A G 12: 25,057,474 D1642G probably damaging Het
Klhl32 T A 4: 24,682,245 D146V probably damaging Het
Krt36 T C 11: 100,102,948 I355V probably damaging Het
Lrrcc1 T A 3: 14,536,128 S73R possibly damaging Het
Ltbp3 A T 19: 5,754,019 H853L probably benign Het
Map3k5 G A 10: 20,141,567 R1369Q probably damaging Het
Mcm8 A G 2: 132,821,406 N148S probably benign Het
Mylk3 A T 8: 85,355,526 L211* probably null Het
Nras T C 3: 103,058,916 probably benign Het
Olfr135 A T 17: 38,208,982 I246F probably damaging Het
Olfr670 A T 7: 104,960,716 N5K probably damaging Het
Os9 A T 10: 127,120,509 Y66N probably damaging Het
Pitpnm1 A G 19: 4,101,228 D15G possibly damaging Het
Reg3a A T 6: 78,382,301 R95* probably null Het
Rnf17 C T 14: 56,512,271 P1425S probably damaging Het
Smad2 T C 18: 76,299,775 probably benign Het
Ttll5 C T 12: 85,933,482 Q76* probably null Het
Uri1 A T 7: 37,996,731 probably benign Het
Vmn2r102 G T 17: 19,678,923 probably null Het
Vmn2r70 T G 7: 85,563,799 M467L probably benign Het
Zfp318 T A 17: 46,413,726 D2218E possibly damaging Het
Zfp692 T C 11: 58,314,029 I405T possibly damaging Het
Zfp692 A G 11: 58,309,998 H235R possibly damaging Het
Other mutations in Ifne
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00594:Ifne APN 4 88879804 missense probably benign 0.01
IGL02167:Ifne APN 4 88879828 missense possibly damaging 0.58
R0212:Ifne UTSW 4 88879735 missense possibly damaging 0.95
R0699:Ifne UTSW 4 88879777 missense probably benign 0.00
R1868:Ifne UTSW 4 88879671 missense probably damaging 1.00
R4480:Ifne UTSW 4 88879601 makesense probably null
R4865:Ifne UTSW 4 88879705 missense probably damaging 1.00
R6752:Ifne UTSW 4 88880082 missense probably benign 0.06
R7319:Ifne UTSW 4 88880006 missense probably damaging 0.98
R7413:Ifne UTSW 4 88879603 makesense probably null
Posted On2013-04-17