Incidental Mutation 'R3498:Gpr35'
ID273638
Institutional Source Beutler Lab
Gene Symbol Gpr35
Ensembl Gene ENSMUSG00000026271
Gene NameG protein-coupled receptor 35
Synonyms
MMRRC Submission 040661-MU
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #R3498 (G1)
Quality Score225
Status Validated
Chromosome1
Chromosomal Location92950865-92986391 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 92983391 bp
ZygosityHeterozygous
Amino Acid Change Tyrosine to Cysteine at position 275 (Y275C)
Ref Sequence ENSEMBL: ENSMUSP00000139648 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000027489] [ENSMUST00000064480] [ENSMUST00000169198] [ENSMUST00000185421] [ENSMUST00000186298] [ENSMUST00000189697]
Predicted Effect probably damaging
Transcript: ENSMUST00000027489
AA Change: Y59C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000027489
Gene: ENSMUSG00000026271
AA Change: Y59C

DomainStartEndE-ValueType
Pfam:7TM_GPCR_Srsx 28 289 3.5e-7 PFAM
Pfam:7tm_1 34 275 1.8e-34 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000064480
AA Change: Y275C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000070832
Gene: ENSMUSG00000026271
AA Change: Y275C

DomainStartEndE-ValueType
Pfam:7TM_GPCR_Srsx 28 289 3.5e-7 PFAM
Pfam:7tm_1 34 275 3.6e-42 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000169198
AA Change: Y275C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000126914
Gene: ENSMUSG00000026271
AA Change: Y275C

DomainStartEndE-ValueType
Pfam:7TM_GPCR_Srsx 28 289 3.5e-7 PFAM
Pfam:7tm_1 34 275 3.6e-42 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000185421
Predicted Effect probably damaging
Transcript: ENSMUST00000186298
AA Change: Y275C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000139648
Gene: ENSMUSG00000026271
AA Change: Y275C

DomainStartEndE-ValueType
Pfam:7TM_GPCR_Srsx 28 289 3.5e-7 PFAM
Pfam:7tm_1 34 275 3.6e-42 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000189697
SMART Domains Protein: ENSMUSP00000139787
Gene: ENSMUSG00000026271

DomainStartEndE-ValueType
Pfam:7TM_GPCR_Srsx 28 147 5.7e-6 PFAM
Pfam:7tm_1 34 147 1.4e-24 PFAM
Meta Mutation Damage Score 0.8052 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.6%
  • 20x: 96.0%
Validation Efficiency 100% (43/43)
Allele List at MGI
Other mutations in this stock
Total: 44 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700001C19Rik AC A 17: 47,433,423 probably benign Het
A3galt2 T C 4: 128,755,557 F6L probably benign Het
Aurkc A G 7: 7,000,030 I175V probably damaging Het
Azi2 A G 9: 118,049,407 D105G probably damaging Het
Bcat1 A G 6: 145,019,342 V45A probably damaging Het
Cass4 C T 2: 172,432,558 P753L probably damaging Het
Ddx42 A G 11: 106,231,193 E178G possibly damaging Het
Dmpk T C 7: 19,086,381 I101T probably damaging Het
Dnah17 C T 11: 118,080,849 probably benign Het
Fosb C T 7: 19,306,632 R161H probably damaging Het
Gm6729 T C 10: 86,540,718 noncoding transcript Het
Gnb1 T A 4: 155,555,026 N237K possibly damaging Het
Hmcn1 A T 1: 150,605,102 I4441N probably damaging Het
Ighe G A 12: 113,271,374 Q389* probably null Het
Kcnj11 T C 7: 46,099,602 D23G probably damaging Het
Lats2 G T 14: 57,722,466 A191E possibly damaging Het
Lyplal1 A G 1: 186,088,660 S197P possibly damaging Het
Map4 G T 9: 110,035,212 V502L probably benign Het
Mgat5 A G 1: 127,384,834 M237V possibly damaging Het
Mindy4 A G 6: 55,216,525 R68G probably benign Het
Nell1 T A 7: 50,258,179 V362E possibly damaging Het
Olfr1031 T A 2: 85,992,430 F204L probably benign Het
Olfr792 T A 10: 129,540,909 I124N probably damaging Het
P4ha2 T C 11: 54,119,253 Y279H probably benign Het
Pcid2 A G 8: 13,100,413 V13A possibly damaging Het
Polr2j T C 5: 136,122,770 I116T probably benign Het
Prdm9 A G 17: 15,562,945 probably benign Het
Prr5 T A 15: 84,703,144 V365E probably benign Het
Ptprf A T 4: 118,224,930 I1037N probably damaging Het
Ranbp17 GCCTGGATACTGACC GCC 11: 33,219,203 probably benign Het
Sde2 T A 1: 180,858,185 C101S probably damaging Het
Sec1 T C 7: 45,679,239 H128R probably damaging Het
Serpinb6a A T 13: 33,918,781 M253K probably damaging Het
Slc1a4 A T 11: 20,313,973 I248N probably damaging Het
Slc22a4 T G 11: 53,992,053 K328N probably benign Het
Slc24a4 A T 12: 102,234,692 K278N probably benign Het
Slc6a21 T A 7: 45,280,842 W222R probably damaging Het
Slc7a2 A G 8: 40,912,530 E466G probably benign Het
Sspo A G 6: 48,467,980 T2133A possibly damaging Het
Taco1 A G 11: 106,072,538 M172V probably benign Het
Tmem127 T A 2: 127,256,120 H36Q probably benign Het
Tmem229b-ps C T 10: 53,475,127 noncoding transcript Het
Vac14 A G 8: 110,671,090 D479G probably benign Het
Vmn1r176 T A 7: 23,835,242 K162I probably benign Het
Other mutations in Gpr35
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00509:Gpr35 APN 1 92982872 missense probably damaging 0.99
IGL03102:Gpr35 APN 1 92982577 missense probably benign 0.00
PIT4280001:Gpr35 UTSW 1 92982634 missense probably damaging 1.00
R0015:Gpr35 UTSW 1 92983232 missense probably damaging 1.00
R0412:Gpr35 UTSW 1 92982784 missense probably benign 0.01
R1203:Gpr35 UTSW 1 92983148 missense probably damaging 0.98
R1515:Gpr35 UTSW 1 92983048 missense probably damaging 1.00
R2872:Gpr35 UTSW 1 92983126 missense probably benign 0.34
R2872:Gpr35 UTSW 1 92983126 missense probably benign 0.34
R3499:Gpr35 UTSW 1 92983391 missense probably damaging 1.00
R4732:Gpr35 UTSW 1 92983385 missense probably damaging 1.00
R4733:Gpr35 UTSW 1 92983385 missense probably damaging 1.00
R5270:Gpr35 UTSW 1 92982577 missense probably benign 0.00
R5969:Gpr35 UTSW 1 92983220 missense probably damaging 1.00
R6769:Gpr35 UTSW 1 92982704 missense probably damaging 0.97
R6771:Gpr35 UTSW 1 92982704 missense probably damaging 0.97
R7144:Gpr35 UTSW 1 92982631 missense probably benign 0.11
R7395:Gpr35 UTSW 1 92983207 missense probably damaging 1.00
R8156:Gpr35 UTSW 1 92982715 missense probably damaging 1.00
Z1177:Gpr35 UTSW 1 92983016 missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- ACATGGTCTGGGCCAACTTG -3'
(R):5'- AGATGCAGCCTCTCTAGTCCAAC -3'

Sequencing Primer
(F):5'- CAACTTGGCTGTGTTTGTCATC -3'
(R):5'- TAGTCCAACTGGGTCTCCTAGAG -3'
Posted On2015-04-02