Incidental Mutation 'IGL00904:Ccdc121rt3'
ID 27385
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Ccdc121rt3
Ensembl Gene ENSMUSG00000051503
Gene Name coiled-coil domain containing 121, retrogene 3
Synonyms Gm6583
Accession Numbers
Essential gene? Probably non essential (E-score: 0.069) question?
Stock # IGL00904
Quality Score
Status
Chromosome 5
Chromosomal Location 112501667-112503899 bp(-) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) G to A at 112502994 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Stop codon at position 237 (R237*)
Ref Sequence ENSEMBL: ENSMUSP00000049839 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000035279] [ENSMUST00000051117] [ENSMUST00000112359]
AlphaFold E9Q8Z1
Predicted Effect probably benign
Transcript: ENSMUST00000035279
SMART Domains Protein: ENSMUSP00000047920
Gene: ENSMUSG00000042328

DomainStartEndE-ValueType
low complexity region 171 180 N/A INTRINSIC
low complexity region 467 486 N/A INTRINSIC
low complexity region 514 529 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000051117
AA Change: R237*
SMART Domains Protein: ENSMUSP00000049839
Gene: ENSMUSG00000051503
AA Change: R237*

DomainStartEndE-ValueType
low complexity region 71 83 N/A INTRINSIC
coiled coil region 159 193 N/A INTRINSIC
Pfam:DUF4515 199 404 1.2e-79 PFAM
low complexity region 406 422 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000112359
SMART Domains Protein: ENSMUSP00000107978
Gene: ENSMUSG00000042328

DomainStartEndE-ValueType
low complexity region 171 180 N/A INTRINSIC
low complexity region 467 486 N/A INTRINSIC
low complexity region 514 529 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000133708
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 32 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aak1 G T 6: 86,923,135 (GRCm39) G236C probably damaging Het
Abi1 C T 2: 22,831,942 (GRCm39) R404Q possibly damaging Het
Atp8b3 C T 10: 80,364,598 (GRCm39) G532R probably damaging Het
Bysl C T 17: 47,912,796 (GRCm39) M331I probably benign Het
Cndp1 A G 18: 84,629,790 (GRCm39) S468P probably benign Het
Esd A G 14: 74,987,128 (GRCm39) *266W probably null Het
F5 T C 1: 164,021,578 (GRCm39) V1351A probably benign Het
Fchsd2 A G 7: 100,920,829 (GRCm39) D454G probably benign Het
Fndc1 T A 17: 7,975,195 (GRCm39) M1415L probably benign Het
Ghr T A 15: 3,357,602 (GRCm39) Y222F probably benign Het
Gtf3c2 C T 5: 31,330,202 (GRCm39) S299N probably damaging Het
Ice1 C T 13: 70,750,408 (GRCm39) D93N probably damaging Het
Ints7 T A 1: 191,328,276 (GRCm39) probably null Het
Kif18a A G 2: 109,122,471 (GRCm39) D182G probably damaging Het
Mcm9 A T 10: 53,499,017 (GRCm39) H308Q possibly damaging Het
Mesp2 A G 7: 79,462,401 (GRCm39) D319G probably benign Het
Mrpl55 T A 11: 59,096,499 (GRCm39) S84T probably benign Het
Mybpc3 T C 2: 90,950,374 (GRCm39) V123A probably benign Het
Myom1 T C 17: 71,406,944 (GRCm39) probably benign Het
Nfia C T 4: 97,953,623 (GRCm39) P325S probably damaging Het
Notch4 T C 17: 34,794,535 (GRCm39) probably null Het
Npepps A C 11: 97,149,132 (GRCm39) V130G probably damaging Het
Or7c70 A T 10: 78,683,597 (GRCm39) S51T probably damaging Het
Pja2 G T 17: 64,590,526 (GRCm39) T669K probably damaging Het
Rnf112 G T 11: 61,343,610 (GRCm39) D98E probably damaging Het
Rsl1d1 G A 16: 11,017,558 (GRCm39) T136I probably damaging Het
Samsn1 A T 16: 75,706,008 (GRCm39) probably benign Het
Slc6a9 T C 4: 117,721,814 (GRCm39) L280P probably damaging Het
Svep1 T C 4: 58,097,398 (GRCm39) N1382D probably benign Het
Vmn2r100 T G 17: 19,746,262 (GRCm39) C474G probably damaging Het
Vmn2r74 C T 7: 85,606,788 (GRCm39) R186H probably benign Het
Wdr7 T C 18: 63,929,302 (GRCm39) I1046T probably benign Het
Other mutations in Ccdc121rt3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01464:Ccdc121rt3 APN 5 112,503,399 (GRCm39) missense possibly damaging 0.93
IGL01615:Ccdc121rt3 APN 5 112,503,696 (GRCm39) missense possibly damaging 0.93
R0508:Ccdc121rt3 UTSW 5 112,502,685 (GRCm39) missense probably damaging 0.99
R1466:Ccdc121rt3 UTSW 5 112,502,630 (GRCm39) missense probably benign 0.00
R1466:Ccdc121rt3 UTSW 5 112,502,630 (GRCm39) missense probably benign 0.00
R1473:Ccdc121rt3 UTSW 5 112,502,415 (GRCm39) missense probably benign 0.45
R1474:Ccdc121rt3 UTSW 5 112,503,642 (GRCm39) missense probably benign
R1584:Ccdc121rt3 UTSW 5 112,502,630 (GRCm39) missense probably benign 0.00
R2032:Ccdc121rt3 UTSW 5 112,502,978 (GRCm39) missense possibly damaging 0.95
R2422:Ccdc121rt3 UTSW 5 112,502,984 (GRCm39) missense probably damaging 1.00
R4795:Ccdc121rt3 UTSW 5 112,503,165 (GRCm39) missense possibly damaging 0.65
R4796:Ccdc121rt3 UTSW 5 112,503,165 (GRCm39) missense possibly damaging 0.65
R5306:Ccdc121rt3 UTSW 5 112,502,910 (GRCm39) missense probably benign 0.41
R5997:Ccdc121rt3 UTSW 5 112,502,874 (GRCm39) missense possibly damaging 0.71
R6915:Ccdc121rt3 UTSW 5 112,502,523 (GRCm39) missense probably damaging 1.00
R7022:Ccdc121rt3 UTSW 5 112,503,395 (GRCm39) missense probably benign
R7702:Ccdc121rt3 UTSW 5 112,503,063 (GRCm39) missense probably benign 0.27
R7721:Ccdc121rt3 UTSW 5 112,503,383 (GRCm39) missense probably benign
R8037:Ccdc121rt3 UTSW 5 112,502,882 (GRCm39) missense probably benign 0.23
R8114:Ccdc121rt3 UTSW 5 112,503,563 (GRCm39) missense probably benign
R8380:Ccdc121rt3 UTSW 5 112,503,191 (GRCm39) missense probably benign 0.01
R8914:Ccdc121rt3 UTSW 5 112,503,087 (GRCm39) missense probably damaging 0.98
R9067:Ccdc121rt3 UTSW 5 112,502,706 (GRCm39) missense possibly damaging 0.90
R9140:Ccdc121rt3 UTSW 5 112,502,723 (GRCm39) missense probably damaging 1.00
R9322:Ccdc121rt3 UTSW 5 112,503,272 (GRCm39) missense probably damaging 0.99
R9690:Ccdc121rt3 UTSW 5 112,503,300 (GRCm39) missense probably benign
R9786:Ccdc121rt3 UTSW 5 112,502,939 (GRCm39) missense probably benign
Z1177:Ccdc121rt3 UTSW 5 112,502,784 (GRCm39) missense probably damaging 0.98
Posted On 2013-04-17