Incidental Mutation 'R3828:Mcts1'
ID 273867
Institutional Source Beutler Lab
Gene Symbol Mcts1
Ensembl Gene ENSMUSG00000000355
Gene Name malignant T cell amplified sequence 1
Synonyms MCT-1, 1500019M23Rik
MMRRC Submission 040886-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R3828 (G1)
Quality Score 222
Status Validated
Chromosome X
Chromosomal Location 37689455-37702303 bp(+) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) T to C at 37691445 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000000365 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000000365]
AlphaFold Q9DB27
Predicted Effect probably benign
Transcript: ENSMUST00000000365
SMART Domains Protein: ENSMUSP00000000365
Gene: ENSMUSG00000000355

DomainStartEndE-ValueType
Blast:PSN 40 63 1e-6 BLAST
PUA 93 171 3.23e-14 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000134573
Predicted Effect noncoding transcript
Transcript: ENSMUST00000140204
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.5%
Validation Efficiency 100% (34/34)
Allele List at MGI
Other mutations in this stock
Total: 33 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Camk2b A G 11: 5,978,932 (GRCm39) V32A probably damaging Het
Cbr2 A T 11: 120,621,278 (GRCm39) H140Q probably benign Het
Cdk19 T C 10: 40,351,609 (GRCm39) V258A probably damaging Het
Cep104 T G 4: 154,069,400 (GRCm39) M207R probably damaging Het
Chd2 A G 7: 73,141,163 (GRCm39) Y577H possibly damaging Het
Col4a1 C A 8: 11,259,650 (GRCm39) G1341V probably damaging Het
Commd9 C A 2: 101,727,486 (GRCm39) N93K probably benign Het
Cplane2 C T 4: 140,945,900 (GRCm39) R148C probably damaging Het
Cx3cl1 A T 8: 95,503,934 (GRCm39) probably benign Het
Cxcr6 A T 9: 123,639,934 (GRCm39) M319L probably benign Het
Dlg5 T A 14: 24,196,226 (GRCm39) K1308I probably damaging Het
Dnah17 G A 11: 117,931,984 (GRCm39) probably benign Het
Ffar2 A T 7: 30,519,510 (GRCm39) I10N possibly damaging Het
Gm17521 C A X: 121,938,922 (GRCm39) G149C unknown Het
Gm5862 T G 5: 26,224,345 (GRCm39) H208P probably benign Het
Gpat4 G A 8: 23,670,171 (GRCm39) P286L probably damaging Het
Ino80d A T 1: 63,101,237 (GRCm39) M463K possibly damaging Het
Lrp2 G A 2: 69,256,356 (GRCm39) P4595S probably benign Het
Mark4 A G 7: 19,177,112 (GRCm39) I239T possibly damaging Het
Mcoln1 C T 8: 3,550,601 (GRCm39) A2V possibly damaging Het
Mrgprb5 T A 7: 47,817,839 (GRCm39) M299L probably benign Het
Ncapg2 A T 12: 116,370,938 (GRCm39) probably benign Het
Or56a3 A G 7: 104,735,504 (GRCm39) N194D probably benign Het
Pcdhga4 G T 18: 37,820,654 (GRCm39) L734F possibly damaging Het
Rrm2 G T 12: 24,758,598 (GRCm39) A47S probably benign Het
Rsph6a T C 7: 18,791,539 (GRCm39) L236P probably damaging Het
Rtkn2 A T 10: 67,833,456 (GRCm39) probably null Het
Stk11 T C 10: 79,963,782 (GRCm39) probably null Het
Syt14 T C 1: 192,584,083 (GRCm39) N444S probably damaging Het
Tmem59l A G 8: 70,939,951 (GRCm39) L6S unknown Het
Tnks A G 8: 35,340,332 (GRCm39) F429L probably damaging Het
Usp15 T A 10: 123,032,775 (GRCm39) I16F possibly damaging Het
Vps50 T C 6: 3,533,500 (GRCm39) I244T probably benign Het
Other mutations in Mcts1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01520:Mcts1 APN X 37,700,636 (GRCm39) splice site probably benign
IGL03268:Mcts1 APN X 37,690,859 (GRCm39) missense possibly damaging 0.50
R3826:Mcts1 UTSW X 37,691,445 (GRCm39) splice site probably benign
Z1176:Mcts1 UTSW X 37,690,818 (GRCm39) missense possibly damaging 0.48
Predicted Primers PCR Primer
(F):5'- TTGGCTGTAGCATGTCATATTTCC -3'
(R):5'- GTGCCTACCACATATGAAGTTCAC -3'

Sequencing Primer
(F):5'- GACAGGTATTTTTTGGTCAG -3'
(R):5'- GGATTTCTGAGTTCAAGACCAGCC -3'
Posted On 2015-04-02