Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00952:Ccdc96'

27469

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Ccdc96

Ensembl Gene

ENSMUSG00000050677

Gene Name

coiled-coil domain containing 96

Synonyms

4921513E08Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.062) question?

Stock #

IGL00952

Quality Score

Status

Chromosome

Chromosomal Location

36641932-36645515 bp(+) (GRCm39)

Type of Mutation

unclassified

DNA Base Change (assembly)

T to A at 36642424 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000114124 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031097] [ENSMUST00000060100] [ENSMUST00000119916]

AlphaFold

Q9CR92

Predicted Effect

probably benign
Transcript: ENSMUST00000031097

SMART Domains

Protein: ENSMUSP00000031097
Gene: ENSMUSG00000029196

Domain	Start	End	E-Value	Type
ZnF_ZZ	3	46	2.64e-5	SMART
SANT	66	116	1.75e-9	SMART
low complexity region	138	154	N/A	INTRINSIC
low complexity region	233	260	N/A	INTRINSIC
low complexity region	306	325	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000060100
AA Change: D143E

SMART Domains

Protein: ENSMUSP00000059636
Gene: ENSMUSG00000050677
AA Change: D143E

Domain	Start	End	E-Value	Type
low complexity region	37	50	N/A	INTRINSIC
SCOP:d1qbkb_	99	144	6e-3	SMART
low complexity region	223	234	N/A	INTRINSIC
coiled coil region	315	355	N/A	INTRINSIC
Pfam:DUF4201	394	570	9.5e-53	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000119916

SMART Domains

Protein: ENSMUSP00000114124
Gene: ENSMUSG00000029196

Domain	Start	End	E-Value	Type
Blast:SANT	16	41	2e-10	BLAST
low complexity region	63	79	N/A	INTRINSIC
low complexity region	158	185	N/A	INTRINSIC
low complexity region	231	250	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 50 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1810009J06Rik	T	G	6: 40,941,733 (GRCm39)	I4S	probably benign	Het
Abca8b	A	G	11: 109,859,886 (GRCm39)		probably null	Het
Aftph	A	T	11: 20,677,483 (GRCm39)	V42E	probably damaging	Het
AI467606	A	G	7: 126,691,874 (GRCm39)	S150G	probably damaging	Het
Art4	T	C	6: 136,831,818 (GRCm39)	N108D	possibly damaging	Het
B9d1	G	A	11: 61,403,504 (GRCm39)	V167I	possibly damaging	Het
Ccdc47	A	T	11: 106,094,358 (GRCm39)		probably null	Het
Cfap44	A	G	16: 44,241,638 (GRCm39)	I670V	probably benign	Het
Col18a1	T	G	10: 76,905,813 (GRCm39)	K909Q	possibly damaging	Het
Col8a2	A	G	4: 126,203,584 (GRCm39)	Y59C	probably damaging	Het
Coro6	A	T	11: 77,359,291 (GRCm39)	D288V	probably damaging	Het
Cul4a	C	T	8: 13,196,562 (GRCm39)	L739F	probably damaging	Het
Dmxl2	C	T	9: 54,324,166 (GRCm39)	V1073I	probably damaging	Het
Dnah11	T	C	12: 118,160,386 (GRCm39)	T115A	possibly damaging	Het
Fdx2	A	G	9: 20,984,558 (GRCm39)		probably null	Het
Flnc	C	T	6: 29,459,546 (GRCm39)	Q2549*	probably null	Het
Foxn2	T	C	17: 88,783,308 (GRCm39)	C188R	probably benign	Het
Hnrnpm	C	A	17: 33,868,876 (GRCm39)	R517L	probably damaging	Het
Ilf3	T	C	9: 21,307,347 (GRCm39)	L343P	probably damaging	Het
Itgb2l	C	T	16: 96,227,950 (GRCm39)	G518S	probably damaging	Het
Itpr2	T	A	6: 146,060,459 (GRCm39)	I2486F	probably damaging	Het
Kat2a	A	G	11: 100,596,977 (GRCm39)	V681A	probably damaging	Het
Kif17	A	G	4: 137,990,019 (GRCm39)	N69S	possibly damaging	Het
Kif26b	G	A	1: 178,759,770 (GRCm39)	D2106N	probably damaging	Het
Klf6	A	G	13: 5,911,680 (GRCm39)	T15A	probably benign	Het
Lyst	A	G	13: 13,852,692 (GRCm39)	T2231A	probably benign	Het
Mark4	T	C	7: 19,165,749 (GRCm39)	T515A	possibly damaging	Het
Mast3	A	T	8: 71,233,327 (GRCm39)		probably benign	Het
Nalcn	T	C	14: 123,586,201 (GRCm39)	K722R	probably benign	Het
Ncf2	G	A	1: 152,711,857 (GRCm39)	E524K	probably benign	Het
Or56a3b	A	G	7: 104,771,614 (GRCm39)		probably null	Het
Or5p81	A	G	7: 108,267,445 (GRCm39)	N274S	possibly damaging	Het
Or5w12	A	T	2: 87,502,159 (GRCm39)	I184N	probably damaging	Het
Or8c17	A	T	9: 38,179,801 (GRCm39)		probably benign	Het
Plcg2	A	T	8: 118,333,956 (GRCm39)	M910L	probably benign	Het
Pramel14	T	C	4: 143,719,894 (GRCm39)	H157R	probably benign	Het
Rai1	A	T	11: 60,078,818 (GRCm39)	K961*	probably null	Het
Rsph14	T	C	10: 74,865,601 (GRCm39)	D112G	probably benign	Het
Sgo1	T	A	17: 53,994,275 (GRCm39)	D59V	probably damaging	Het
Slc22a29	A	T	19: 8,195,221 (GRCm39)	V138E	probably damaging	Het
Slc9a1	T	A	4: 133,143,693 (GRCm39)	V393D	probably damaging	Het
Smg6	A	G	11: 74,819,974 (GRCm39)	R82G	probably benign	Het
Sppl3	T	C	5: 115,212,935 (GRCm39)	S55P	probably benign	Het
Srsf12	A	C	4: 33,226,103 (GRCm39)	Q122P	possibly damaging	Het
Tas1r2	T	C	4: 139,382,563 (GRCm39)	M67T	probably benign	Het
Thnsl1	G	A	2: 21,216,767 (GRCm39)	V174I	possibly damaging	Het
Thumpd1	A	G	7: 119,316,232 (GRCm39)	V239A	possibly damaging	Het
Tnxb	T	G	17: 34,932,102 (GRCm39)	Y2212D	probably damaging	Het
Trim40	T	C	17: 37,193,289 (GRCm39)	*213W	probably null	Het
Ttc16	T	C	2: 32,660,259 (GRCm39)	D183G	probably damaging	Het

Other mutations in Ccdc96

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R0167:Ccdc96	UTSW	5	36,642,497 (GRCm39)	missense	probably benign	0.18
R0302:Ccdc96	UTSW	5	36,643,445 (GRCm39)	missense	possibly damaging	0.51
R0423:Ccdc96	UTSW	5	36,642,591 (GRCm39)	missense	probably benign	0.41
R0532:Ccdc96	UTSW	5	36,643,710 (GRCm39)	missense	probably benign	0.18
R3800:Ccdc96	UTSW	5	36,643,611 (GRCm39)	missense	probably damaging	1.00
R3977:Ccdc96	UTSW	5	36,642,510 (GRCm39)	missense	possibly damaging	0.96
R4575:Ccdc96	UTSW	5	36,643,419 (GRCm39)	missense	possibly damaging	0.88
R4720:Ccdc96	UTSW	5	36,642,219 (GRCm39)	unclassified	probably benign
R5476:Ccdc96	UTSW	5	36,642,981 (GRCm39)	missense	possibly damaging	0.83
R5945:Ccdc96	UTSW	5	36,643,194 (GRCm39)	missense	probably damaging	1.00
R5995:Ccdc96	UTSW	5	36,643,718 (GRCm39)	missense	probably damaging	0.99
R6434:Ccdc96	UTSW	5	36,643,707 (GRCm39)	missense	probably damaging	1.00
R6493:Ccdc96	UTSW	5	36,643,596 (GRCm39)	missense	probably damaging	0.99
R6632:Ccdc96	UTSW	5	36,642,533 (GRCm39)	missense	probably benign	0.07
R6633:Ccdc96	UTSW	5	36,642,533 (GRCm39)	missense	probably benign	0.07
R7395:Ccdc96	UTSW	5	36,642,609 (GRCm39)	missense	probably benign	0.29
R7819:Ccdc96	UTSW	5	36,643,329 (GRCm39)	missense	probably damaging	0.98
R8466:Ccdc96	UTSW	5	36,642,252 (GRCm39)	unclassified	probably benign
R9351:Ccdc96	UTSW	5	36,642,069 (GRCm39)	missense	unknown
X0022:Ccdc96	UTSW	5	36,643,718 (GRCm39)	missense	probably damaging	1.00
Z1176:Ccdc96	UTSW	5	36,642,938 (GRCm39)	missense	probably benign	0.03

Posted On

2013-04-17