Incidental Mutation 'R3822:Herpud2'
ID 275228
Institutional Source Beutler Lab
Gene Symbol Herpud2
Ensembl Gene ENSMUSG00000008429
Gene Name HERPUD family member 2
Synonyms 5031400M07Rik
MMRRC Submission 040884-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.168) question?
Stock # R3822 (G1)
Quality Score 225
Status Validated
Chromosome 9
Chromosomal Location 25019428-25063116 bp(-) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) G to A at 25036220 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamine to Stop codon at position 147 (Q147*)
Ref Sequence ENSEMBL: ENSMUSP00000008573 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000008573]
AlphaFold Q9JJC9
Predicted Effect probably null
Transcript: ENSMUST00000008573
AA Change: Q147*
SMART Domains Protein: ENSMUSP00000008573
Gene: ENSMUSG00000008429
AA Change: Q147*

DomainStartEndE-ValueType
UBQ 10 87 7.34e-3 SMART
low complexity region 88 98 N/A INTRINSIC
low complexity region 109 126 N/A INTRINSIC
low complexity region 194 226 N/A INTRINSIC
transmembrane domain 291 313 N/A INTRINSIC
low complexity region 346 374 N/A INTRINSIC
Meta Mutation Damage Score 0.9713 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.6%
  • 20x: 95.9%
Validation Efficiency 100% (34/34)
Allele List at MGI
Other mutations in this stock
Total: 36 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aarsd1 T A 11: 101,301,971 (GRCm39) I332F probably damaging Het
Acp3 G T 9: 104,201,916 (GRCm39) Q76K probably damaging Het
Anp32e A T 3: 95,842,181 (GRCm39) I100L probably benign Het
Ccdc13 C A 9: 121,660,085 (GRCm39) L76F probably damaging Het
Cd44 T C 2: 102,731,738 (GRCm39) probably null Het
Chka A G 19: 3,932,038 (GRCm39) probably benign Het
Cnot6 A T 11: 49,579,999 (GRCm39) S98T probably benign Het
Cth A G 3: 157,624,136 (GRCm39) F127S probably benign Het
Dnah9 C A 11: 65,741,829 (GRCm39) probably null Het
Dysf T C 6: 84,184,070 (GRCm39) probably benign Het
Flad1 T A 3: 89,318,494 (GRCm39) I20F probably damaging Het
Gm20730 C T 6: 43,058,656 (GRCm39) S52N probably benign Het
Gpr89 A G 3: 96,800,260 (GRCm39) S113P probably benign Het
Hivep1 A T 13: 42,337,787 (GRCm39) H2622L possibly damaging Het
Hlcs T C 16: 94,068,840 (GRCm39) N274D probably benign Het
Ido2 T C 8: 25,023,771 (GRCm39) I356V probably benign Het
Insyn2b T C 11: 34,353,007 (GRCm39) S350P probably benign Het
Itgam A G 7: 127,711,458 (GRCm39) probably null Het
Lama1 C A 17: 68,086,041 (GRCm39) probably null Het
Lrrc4b T A 7: 44,111,982 (GRCm39) V618E probably damaging Het
Man1a2 A G 3: 100,539,913 (GRCm39) I176T possibly damaging Het
Mns1 A G 9: 72,346,730 (GRCm39) E71G probably damaging Het
Ncoa6 T A 2: 155,248,858 (GRCm39) N1482I probably damaging Het
Neto2 C A 8: 86,389,924 (GRCm39) E180* probably null Het
Psmb7 A T 2: 38,503,440 (GRCm39) probably benign Het
Rin2 C T 2: 145,664,550 (GRCm39) T60M probably benign Het
Slc28a3 A G 13: 58,706,092 (GRCm39) V639A probably benign Het
Tenm2 A T 11: 35,915,147 (GRCm39) I2129N probably damaging Het
Topaz1 A G 9: 122,626,848 (GRCm39) D1492G possibly damaging Het
Trank1 G A 9: 111,207,887 (GRCm39) G1711R probably damaging Het
Trpm1 A G 7: 63,867,451 (GRCm39) probably benign Het
Ugt1a6a T A 1: 88,066,251 (GRCm39) V19E probably benign Het
Vmn2r60 A T 7: 41,785,125 (GRCm39) E112D probably damaging Het
Wdr4 T G 17: 31,731,195 (GRCm39) Q55P probably damaging Het
Xpnpep1 G A 19: 52,992,250 (GRCm39) probably benign Het
Zfyve16 A T 13: 92,657,769 (GRCm39) L714Q probably damaging Het
Other mutations in Herpud2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01310:Herpud2 APN 9 25,062,247 (GRCm39) missense probably benign 0.00
IGL01325:Herpud2 APN 9 25,025,207 (GRCm39) missense probably benign
R1793:Herpud2 UTSW 9 25,021,953 (GRCm39) missense possibly damaging 0.95
R3976:Herpud2 UTSW 9 25,021,734 (GRCm39) missense probably damaging 1.00
R4886:Herpud2 UTSW 9 25,036,285 (GRCm39) missense probably benign 0.05
R5291:Herpud2 UTSW 9 25,036,256 (GRCm39) missense probably benign
R5922:Herpud2 UTSW 9 25,020,280 (GRCm39) missense probably benign 0.00
R6062:Herpud2 UTSW 9 25,020,284 (GRCm39) missense probably damaging 0.96
R6200:Herpud2 UTSW 9 25,062,130 (GRCm39) missense probably damaging 1.00
R7529:Herpud2 UTSW 9 25,020,193 (GRCm39) missense probably damaging 0.99
R7649:Herpud2 UTSW 9 25,021,902 (GRCm39) missense possibly damaging 0.90
R9330:Herpud2 UTSW 9 25,036,246 (GRCm39) missense probably damaging 1.00
R9539:Herpud2 UTSW 9 25,041,936 (GRCm39) missense probably damaging 0.96
X0063:Herpud2 UTSW 9 25,062,165 (GRCm39) missense probably damaging 0.98
Z1176:Herpud2 UTSW 9 25,041,918 (GRCm39) missense not run
Z1177:Herpud2 UTSW 9 25,041,918 (GRCm39) missense not run
Predicted Primers PCR Primer
(F):5'- AGCTTTTCACGTTTAGTAGTTGCC -3'
(R):5'- TACGTTACAGTCTTGGCTTTCTGAC -3'

Sequencing Primer
(F):5'- AAAGCATGTGAAAGTACTTG -3'
(R):5'- AGTCTTGGCTTTCTGACCTTTTTAG -3'
Posted On 2015-04-02