Mutagenetix > Incidental Mutation

Incidental Mutation 'R3874:Vmn2r7'

276708

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r7

Ensembl Gene

ENSMUSG00000116028

Gene Name

Synonyms

MMRRC Submission

040792-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.084) question?

Stock #

R3874 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

64690660-64719602 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 64719611 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Leucine at position 86 (F86L)

Ref Sequence

ENSEMBL: ENSMUSP00000124192 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000161972] [ENSMUST00000168072]

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000050123

Predicted Effect

possibly damaging
Transcript: ENSMUST00000161972
AA Change: F86L

PolyPhen 2 Score 0.692 (Sensitivity: 0.86; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000124192
Gene: ENSMUSG00000062200
AA Change: F86L

Domain	Start	End	E-Value	Type
signal peptide	1	24	N/A	INTRINSIC
Pfam:ANF_receptor	90	507	3.8e-77	PFAM
Pfam:NCD3G	549	602	3.4e-17	PFAM
Pfam:7tm_3	635	869	1.1e-47	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000168072

SMART Domains

Protein: ENSMUSP00000131220
Gene: ENSMUSG00000116028

Domain	Start	End	E-Value	Type
Pfam:ANF_receptor	1	416	5.1e-72	PFAM
Pfam:Peripla_BP_6	63	245	6.1e-10	PFAM
Pfam:NCD3G	458	511	1.8e-17	PFAM
Pfam:7tm_3	542	779	4.3e-76	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000177146

Coding Region Coverage

1x: 99.2%
3x: 98.7%
10x: 97.5%
20x: 95.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 68 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
9130213A22Rik	C	A	11: 69,121,475	G26*	probably null	Het
Abca5	T	A	11: 110,310,233	Y447F	probably damaging	Het
Acox2	A	G	14: 8,248,061	I407T	probably benign	Het
Adam8	T	C	7: 139,987,607	N408D	probably damaging	Het
Adgre1	A	T	17: 57,401,925	T39S	probably benign	Het
Akap12	G	A	10: 4,357,590	V1467I	probably benign	Het
Arid1b	T	A	17: 5,336,515		probably null	Het
Atp2c2	A	G	8: 119,735,296	I303V	possibly damaging	Het
Bpifc	C	T	10: 85,991,254	V144I	probably benign	Het
C530008M17Rik	A	G	5: 76,840,892	D30G	probably damaging	Het
Camk4	A	G	18: 33,158,854	E189G	possibly damaging	Het
Casz1	A	G	4: 148,939,589		probably benign	Het
Ccdc134	T	C	15: 82,131,442	V41A	possibly damaging	Het
Chrd	A	T	16: 20,738,910	T753S	probably damaging	Het
Cyb561a3	T	C	19: 10,585,371	V125A	probably benign	Het
D630039A03Rik	T	A	4: 57,910,606	T69S	probably benign	Het
Dchs1	A	G	7: 105,761,635	F1687S	probably damaging	Het
Dlgap4	T	C	2: 156,749,347	S818P	probably benign	Het
Dnah2	A	G	11: 69,429,348	I3965T	probably damaging	Het
Dnaic2	G	T	11: 114,732,955	G15W	probably damaging	Het
Dsg1c	A	G	18: 20,277,052	I526V	probably benign	Het
Far2	G	A	6: 148,150,591	E123K	probably benign	Het
Gli1	A	T	10: 127,330,219	V1055E	probably damaging	Het
Hand2	G	T	8: 57,321,976	A24S	probably benign	Het
Helb	T	C	10: 120,106,037	I249V	probably benign	Het
Hspa4l	G	A	3: 40,772,642	V492M	probably damaging	Het
Hspg2	T	C	4: 137,539,349	I1916T	probably damaging	Het
Igfals	G	A	17: 24,881,605	V557I	possibly damaging	Het
Itpa	T	G	2: 130,681,010	S176A	probably damaging	Het
Kcnu1	T	A	8: 25,885,317	L353H	probably damaging	Het
Klhl1	A	G	14: 96,518,179	F47L	probably benign	Het
Klhl13	T	C	X: 23,285,176	D21G	probably benign	Het
Krt26	T	C	11: 99,334,744	K304E	probably damaging	Het
Krt9	C	T	11: 100,190,849	V285I	probably damaging	Het
Mansc1	T	C	6: 134,610,183	R344G	possibly damaging	Het
Mier2	G	T	10: 79,541,797	P439T	possibly damaging	Het
Mppe1	T	A	18: 67,225,886		probably null	Het
Nedd4l	G	A	18: 65,167,535	A243T	probably benign	Het
Notch4	T	A	17: 34,578,069	C934*	probably null	Het
Nsmce3	C	T	7: 64,872,168	D251N	probably damaging	Het
Olfr101	T	A	17: 37,299,979	T148S	probably benign	Het
Olfr1156	T	A	2: 87,949,530	R234S	probably damaging	Het
Olfr1310	T	C	2: 112,008,323	T288A	possibly damaging	Het
Olfr139	A	G	11: 74,044,699	C192R	probably damaging	Het
Olfr517	C	T	7: 108,869,128	V9M	probably damaging	Het
Olfr937	A	G	9: 39,060,174	I164T	probably benign	Het
Pdzd7	T	C	19: 45,045,628	T6A	probably benign	Het
Picalm	T	A	7: 90,189,219	F493Y	probably damaging	Het
Prl7d1	A	G	13: 27,716,668	M1T	probably null	Het
Prl8a1	T	C	13: 27,575,458	K199E	possibly damaging	Het
Rims1	C	T	1: 22,428,489	R764H	probably damaging	Het
Rnf17	G	T	14: 56,475,413	R779L	possibly damaging	Het
Rufy2	T	C	10: 62,998,137	L294P	probably damaging	Het
Sgsh	A	G	11: 119,350,947	L111P	probably damaging	Het
Slc22a30	G	T	19: 8,336,849	T491K	probably benign	Het
Slc35b3	T	C	13: 38,943,068	N20D	possibly damaging	Het
Slc5a4a	T	C	10: 76,181,655	F429L	probably benign	Het
Sulf1	T	C	1: 12,817,412	I270T	probably damaging	Het
Tmem51	T	C	4: 142,031,748	T230A	probably damaging	Het
Tnc	T	A	4: 64,008,710	I860F	probably damaging	Het
Trh	A	T	6: 92,243,698	V61E	possibly damaging	Het
Ttn	T	G	2: 76,754,099	T22222P	probably damaging	Het
Uroc1	A	T	6: 90,361,512	K652*	probably null	Het
Usp34	C	T	11: 23,489,033	P3532S	possibly damaging	Het
Vmn2r120	A	T	17: 57,524,954	F278L	probably benign	Het
Vmn2r87	A	T	10: 130,479,987	I70K	possibly damaging	Het
Vps13a	C	T	19: 16,744,953	A332T	probably benign	Het
Zfp568	T	A	7: 30,023,396	C589S	probably damaging	Het

Other mutations in Vmn2r7

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00961:Vmn2r7	APN	3	64715813	missense	possibly damaging	0.60
IGL01762:Vmn2r7	APN	3	64691435	missense	probably benign	0.39
IGL01903:Vmn2r7	APN	3	64719443	missense	probably benign	0.00
IGL02263:Vmn2r7	APN	3	64691447	missense	probably damaging	1.00
IGL02458:Vmn2r7	APN	3	64693025	missense	probably damaging	0.97
IGL02593:Vmn2r7	APN	3	64693022	missense	probably damaging	1.00
IGL02797:Vmn2r7	APN	3	64691245	missense	possibly damaging	0.80
IGL03047:Vmn2r7	UTSW	3	64707218	missense	possibly damaging	0.81
PIT4504001:Vmn2r7	UTSW	3	64715976	missense	probably benign	0.01
R0193:Vmn2r7	UTSW	3	64691039	missense	probably damaging	1.00
R0329:Vmn2r7	UTSW	3	64691018	missense	probably damaging	1.00
R0609:Vmn2r7	UTSW	3	64716479	missense	probably benign	0.44
R0735:Vmn2r7	UTSW	3	64716367	missense	probably benign	0.02
R0941:Vmn2r7	UTSW	3	64716579	missense	probably benign
R1065:Vmn2r7	UTSW	3	64707138	missense	possibly damaging	0.82
R1378:Vmn2r7	UTSW	3	64691604	missense	possibly damaging	0.59
R1445:Vmn2r7	UTSW	3	64724802	missense	probably benign	0.01
R1506:Vmn2r7	UTSW	3	64707079	missense	probably benign
R1509:Vmn2r7	UTSW	3	64716460	nonsense	probably null
R1519:Vmn2r7	UTSW	3	64716455	missense	possibly damaging	0.95
R1706:Vmn2r7	UTSW	3	64691459	missense	possibly damaging	0.79
R2113:Vmn2r7	UTSW	3	64691604	missense	possibly damaging	0.59
R3725:Vmn2r7	UTSW	3	64724991	missense	possibly damaging	0.65
R3902:Vmn2r7	UTSW	3	64719516	missense	possibly damaging	0.46
R4084:Vmn2r7	UTSW	3	64692993	missense	probably benign	0.08
R4117:Vmn2r7	UTSW	3	64715717	intron	probably benign
R4333:Vmn2r7	UTSW	3	64690778	missense	probably damaging	1.00
R4551:Vmn2r7	UTSW	3	64690689	missense	possibly damaging	0.86
R4643:Vmn2r7	UTSW	3	64716404	missense	probably damaging	1.00
R4654:Vmn2r7	UTSW	3	64719443	missense	probably benign	0.00
R5091:Vmn2r7	UTSW	3	64690784	missense	possibly damaging	0.63
R5109:Vmn2r7	UTSW	3	64690667	missense	probably null	0.84
R5372:Vmn2r7	UTSW	3	64716324	missense	probably damaging	1.00
R5415:Vmn2r7	UTSW	3	64716237	missense	probably benign	0.07
R5740:Vmn2r7	UTSW	3	64707233	missense	probably benign
R5977:Vmn2r7	UTSW	3	64716043	nonsense	probably null
R6019:Vmn2r7	UTSW	3	64716222	missense	probably damaging	1.00
R6058:Vmn2r7	UTSW	3	64725015	missense	probably benign	0.00
R6139:Vmn2r7	UTSW	3	64715918	missense	probably damaging	1.00
R6696:Vmn2r7	UTSW	3	64707074	missense	probably benign	0.01
R6887:Vmn2r7	UTSW	3	64690827	missense	probably damaging	1.00
R6918:Vmn2r7	UTSW	3	64691339	missense	probably benign	0.03
R6949:Vmn2r7	UTSW	3	64691121	missense	probably damaging	0.99
R6980:Vmn2r7	UTSW	3	64716566	missense	possibly damaging	0.67
R7196:Vmn2r7	UTSW	3	64715777	missense	probably benign	0.00
R7286:Vmn2r7	UTSW	3	64690880	missense	probably benign	0.00
R7455:Vmn2r7	UTSW	3	64716593	missense	probably benign
R7557:Vmn2r7	UTSW	3	64724973	missense	probably benign
R7864:Vmn2r7	UTSW	3	64691526	missense	probably benign	0.10
R8046:Vmn2r7	UTSW	3	64707058	missense	probably damaging	1.00
R8068:Vmn2r7	UTSW	3	64716086	missense	probably benign	0.01
R8252:Vmn2r7	UTSW	3	64693106	missense	probably benign	0.00
R8814:Vmn2r7	UTSW	3	64716563	missense	probably benign	0.14
R9497:Vmn2r7	UTSW	3	64707053	missense	probably benign	0.04
R9722:Vmn2r7	UTSW	3	64690986	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CCAGTGCTGTTTCTCCAGTTAG -3'
(R):5'- AGCAATGTTCAGGTGTAGTTTCTTC -3'

Sequencing Primer
(F):5'- AGTTAGGTTTGTATTCCTCCTGC -3'
(R):5'- TTAATTGTGTTTCCTCACTGGC -3'

Posted On

2015-04-06