Mutagenetix > Incidental Mutation

Incidental Mutation 'R3874:Vmn2r87'

276738

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r87

Ensembl Gene

ENSMUSG00000091511

Gene Name

vomeronasal 2, receptor 87

Synonyms

EG625131

MMRRC Submission

040792-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.066) question?

Stock #

R3874 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

130471332-130497379 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 130479987 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Lysine at position 70 (I70K)

Ref Sequence

ENSEMBL: ENSMUSP00000129215 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000164227]

AlphaFold

E9PZX4

Predicted Effect

possibly damaging
Transcript: ENSMUST00000164227
AA Change: I70K

PolyPhen 2 Score 0.622 (Sensitivity: 0.87; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000129215
Gene: ENSMUSG00000091511
AA Change: I70K

Domain	Start	End	E-Value	Type
signal peptide	1	24	N/A	INTRINSIC
Pfam:ANF_receptor	77	422	1.8e-27	PFAM
Pfam:NCD3G	508	562	1.8e-19	PFAM
Pfam:7tm_3	595	829	8.8e-55	PFAM

Coding Region Coverage

1x: 99.2%
3x: 98.7%
10x: 97.5%
20x: 95.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 68 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
9130213A22Rik	C	A	11: 69,121,475	G26*	probably null	Het
Abca5	T	A	11: 110,310,233	Y447F	probably damaging	Het
Acox2	A	G	14: 8,248,061	I407T	probably benign	Het
Adam8	T	C	7: 139,987,607	N408D	probably damaging	Het
Adgre1	A	T	17: 57,401,925	T39S	probably benign	Het
Akap12	G	A	10: 4,357,590	V1467I	probably benign	Het
Arid1b	T	A	17: 5,336,515		probably null	Het
Atp2c2	A	G	8: 119,735,296	I303V	possibly damaging	Het
Bpifc	C	T	10: 85,991,254	V144I	probably benign	Het
C530008M17Rik	A	G	5: 76,840,892	D30G	probably damaging	Het
Camk4	A	G	18: 33,158,854	E189G	possibly damaging	Het
Casz1	A	G	4: 148,939,589		probably benign	Het
Ccdc134	T	C	15: 82,131,442	V41A	possibly damaging	Het
Chrd	A	T	16: 20,738,910	T753S	probably damaging	Het
Cyb561a3	T	C	19: 10,585,371	V125A	probably benign	Het
D630039A03Rik	T	A	4: 57,910,606	T69S	probably benign	Het
Dchs1	A	G	7: 105,761,635	F1687S	probably damaging	Het
Dlgap4	T	C	2: 156,749,347	S818P	probably benign	Het
Dnah2	A	G	11: 69,429,348	I3965T	probably damaging	Het
Dnaic2	G	T	11: 114,732,955	G15W	probably damaging	Het
Dsg1c	A	G	18: 20,277,052	I526V	probably benign	Het
Far2	G	A	6: 148,150,591	E123K	probably benign	Het
Gli1	A	T	10: 127,330,219	V1055E	probably damaging	Het
Hand2	G	T	8: 57,321,976	A24S	probably benign	Het
Helb	T	C	10: 120,106,037	I249V	probably benign	Het
Hspa4l	G	A	3: 40,772,642	V492M	probably damaging	Het
Hspg2	T	C	4: 137,539,349	I1916T	probably damaging	Het
Igfals	G	A	17: 24,881,605	V557I	possibly damaging	Het
Itpa	T	G	2: 130,681,010	S176A	probably damaging	Het
Kcnu1	T	A	8: 25,885,317	L353H	probably damaging	Het
Klhl1	A	G	14: 96,518,179	F47L	probably benign	Het
Klhl13	T	C	X: 23,285,176	D21G	probably benign	Het
Krt26	T	C	11: 99,334,744	K304E	probably damaging	Het
Krt9	C	T	11: 100,190,849	V285I	probably damaging	Het
Mansc1	T	C	6: 134,610,183	R344G	possibly damaging	Het
Mier2	G	T	10: 79,541,797	P439T	possibly damaging	Het
Mppe1	T	A	18: 67,225,886		probably null	Het
Nedd4l	G	A	18: 65,167,535	A243T	probably benign	Het
Notch4	T	A	17: 34,578,069	C934*	probably null	Het
Nsmce3	C	T	7: 64,872,168	D251N	probably damaging	Het
Olfr101	T	A	17: 37,299,979	T148S	probably benign	Het
Olfr1156	T	A	2: 87,949,530	R234S	probably damaging	Het
Olfr1310	T	C	2: 112,008,323	T288A	possibly damaging	Het
Olfr139	A	G	11: 74,044,699	C192R	probably damaging	Het
Olfr517	C	T	7: 108,869,128	V9M	probably damaging	Het
Olfr937	A	G	9: 39,060,174	I164T	probably benign	Het
Pdzd7	T	C	19: 45,045,628	T6A	probably benign	Het
Picalm	T	A	7: 90,189,219	F493Y	probably damaging	Het
Prl7d1	A	G	13: 27,716,668	M1T	probably null	Het
Prl8a1	T	C	13: 27,575,458	K199E	possibly damaging	Het
Rims1	C	T	1: 22,428,489	R764H	probably damaging	Het
Rnf17	G	T	14: 56,475,413	R779L	possibly damaging	Het
Rufy2	T	C	10: 62,998,137	L294P	probably damaging	Het
Sgsh	A	G	11: 119,350,947	L111P	probably damaging	Het
Slc22a30	G	T	19: 8,336,849	T491K	probably benign	Het
Slc35b3	T	C	13: 38,943,068	N20D	possibly damaging	Het
Slc5a4a	T	C	10: 76,181,655	F429L	probably benign	Het
Sulf1	T	C	1: 12,817,412	I270T	probably damaging	Het
Tmem51	T	C	4: 142,031,748	T230A	probably damaging	Het
Tnc	T	A	4: 64,008,710	I860F	probably damaging	Het
Trh	A	T	6: 92,243,698	V61E	possibly damaging	Het
Ttn	T	G	2: 76,754,099	T22222P	probably damaging	Het
Uroc1	A	T	6: 90,361,512	K652*	probably null	Het
Usp34	C	T	11: 23,489,033	P3532S	possibly damaging	Het
Vmn2r120	A	T	17: 57,524,954	F278L	probably benign	Het
Vmn2r7	A	G	3: 64,719,611	F86L	possibly damaging	Het
Vps13a	C	T	19: 16,744,953	A332T	probably benign	Het
Zfp568	T	A	7: 30,023,396	C589S	probably damaging	Het

Other mutations in Vmn2r87

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01090:Vmn2r87	APN	10	130497378	start codon destroyed	probably null	1.00
IGL01295:Vmn2r87	APN	10	130472009	missense	probably damaging	1.00
IGL01411:Vmn2r87	APN	10	130472560	missense	probably benign	0.03
IGL01680:Vmn2r87	APN	10	130479717	nonsense	probably null
IGL01822:Vmn2r87	APN	10	130472122	missense	probably damaging	1.00
IGL01835:Vmn2r87	APN	10	130479109	missense	probably damaging	1.00
IGL01965:Vmn2r87	APN	10	130479055	missense	possibly damaging	0.49
IGL02562:Vmn2r87	APN	10	130478644	missense	probably damaging	1.00
IGL02665:Vmn2r87	APN	10	130497180	missense	probably benign	0.16
IGL03202:Vmn2r87	APN	10	130497222	missense	probably benign
FR4304:Vmn2r87	UTSW	10	130478714	missense	probably benign	0.01
FR4340:Vmn2r87	UTSW	10	130478714	missense	probably benign	0.01
FR4342:Vmn2r87	UTSW	10	130478714	missense	probably benign	0.01
FR4589:Vmn2r87	UTSW	10	130478714	missense	probably benign	0.01
LCD18:Vmn2r87	UTSW	10	130478714	missense	probably benign	0.01
R0344:Vmn2r87	UTSW	10	130479937	missense	probably damaging	1.00
R0374:Vmn2r87	UTSW	10	130471979	missense	probably damaging	1.00
R0384:Vmn2r87	UTSW	10	130471843	missense	probably benign
R1144:Vmn2r87	UTSW	10	130476229	splice site	probably benign
R1172:Vmn2r87	UTSW	10	130477584	missense	probably benign	0.03
R1860:Vmn2r87	UTSW	10	130479886	missense	probably benign	0.00
R1866:Vmn2r87	UTSW	10	130472572	missense	possibly damaging	0.88
R1897:Vmn2r87	UTSW	10	130471960	missense	probably damaging	1.00
R2360:Vmn2r87	UTSW	10	130479762	missense	probably damaging	0.99
R2909:Vmn2r87	UTSW	10	130478996	missense	probably damaging	0.99
R4113:Vmn2r87	UTSW	10	130479822	missense	probably benign
R4190:Vmn2r87	UTSW	10	130472687	missense	probably damaging	1.00
R4197:Vmn2r87	UTSW	10	130479910	missense	possibly damaging	0.55
R4201:Vmn2r87	UTSW	10	130472579	missense	probably benign	0.03
R4202:Vmn2r87	UTSW	10	130472579	missense	probably benign	0.03
R4368:Vmn2r87	UTSW	10	130479807	missense	probably benign	0.44
R4485:Vmn2r87	UTSW	10	130479809	nonsense	probably null
R4537:Vmn2r87	UTSW	10	130472185	missense	probably benign	0.12
R4590:Vmn2r87	UTSW	10	130479145	missense	possibly damaging	0.69
R4752:Vmn2r87	UTSW	10	130478467	nonsense	probably null
R4873:Vmn2r87	UTSW	10	130472498	missense	probably damaging	1.00
R4875:Vmn2r87	UTSW	10	130472498	missense	probably damaging	1.00
R4923:Vmn2r87	UTSW	10	130478566	missense	probably damaging	0.99
R4970:Vmn2r87	UTSW	10	130478553	missense	probably damaging	1.00
R5049:Vmn2r87	UTSW	10	130472429	missense	probably damaging	0.96
R5112:Vmn2r87	UTSW	10	130478553	missense	probably damaging	1.00
R5187:Vmn2r87	UTSW	10	130497339	missense	probably null	0.99
R5618:Vmn2r87	UTSW	10	130479948	missense	probably damaging	1.00
R6057:Vmn2r87	UTSW	10	130472357	missense	probably benign	0.02
R6220:Vmn2r87	UTSW	10	130479938	missense	probably benign	0.01
R6287:Vmn2r87	UTSW	10	130478422	critical splice donor site	probably null
R6383:Vmn2r87	UTSW	10	130479000	missense	probably damaging	1.00
R6576:Vmn2r87	UTSW	10	130478785	missense	probably benign	0.05
R6742:Vmn2r87	UTSW	10	130472527	missense	probably damaging	1.00
R7086:Vmn2r87	UTSW	10	130497309	missense	probably benign	0.00
R7162:Vmn2r87	UTSW	10	130477547	missense	probably benign	0.08
R7419:Vmn2r87	UTSW	10	130472123	missense	probably damaging	1.00
R7425:Vmn2r87	UTSW	10	130478892	missense	probably damaging	1.00
R7443:Vmn2r87	UTSW	10	130472719	missense	probably damaging	1.00
R7571:Vmn2r87	UTSW	10	130479071	missense	probably damaging	0.99
R7663:Vmn2r87	UTSW	10	130472185	missense	probably damaging	0.97
R7716:Vmn2r87	UTSW	10	130472149	missense	probably benign	0.09
R7793:Vmn2r87	UTSW	10	130477544	missense	probably benign	0.05
R7806:Vmn2r87	UTSW	10	130479810	missense	probably benign
R7841:Vmn2r87	UTSW	10	130497226	missense	probably benign	0.31
R8326:Vmn2r87	UTSW	10	130472311	missense	possibly damaging	0.67
R8411:Vmn2r87	UTSW	10	130472257	missense	probably damaging	0.99
R8445:Vmn2r87	UTSW	10	130477466	missense	probably damaging	1.00
R8540:Vmn2r87	UTSW	10	130478893	missense	possibly damaging	0.74
R8892:Vmn2r87	UTSW	10	130472236	missense	probably damaging	0.99
R9093:Vmn2r87	UTSW	10	130472296	missense	probably benign	0.08
R9623:Vmn2r87	UTSW	10	130479925	missense	probably damaging	1.00
R9667:Vmn2r87	UTSW	10	130478907	missense	probably damaging	1.00
R9797:Vmn2r87	UTSW	10	130472269	missense	probably damaging	0.99
R9797:Vmn2r87	UTSW	10	130476195	missense	probably benign	0.44
Z1088:Vmn2r87	UTSW	10	130472314	missense	probably damaging	0.98
Z1176:Vmn2r87	UTSW	10	130471844	missense	probably benign	0.04

Predicted Primers

PCR Primer
(F):5'- GTCTATGACACATGTATCATCTGC -3'
(R):5'- TAGTGCCCAATGCCTATGAATTC -3'

Sequencing Primer
(F):5'- TGACACATGTATCATCTGCTTTAC -3'
(R):5'- CCCAATGCCTATGAATTCTTAAATTG -3'

Posted On

2015-04-06