Incidental Mutation 'R3877:Or9s13'
ID 276876
Institutional Source Beutler Lab
Gene Symbol Or9s13
Ensembl Gene ENSMUSG00000061616
Gene Name olfactory receptor family 9 subfamily S member 13
Synonyms GA_x6K02T2R7CC-81134096-81133095, Olfr12, MOR208-5
MMRRC Submission 040904-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.073) question?
Stock # R3877 (G1)
Quality Score 225
Status Validated
Chromosome 1
Chromosomal Location 92547603-92548723 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 92547805 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Valine at position 59 (D59V)
Ref Sequence ENSEMBL: ENSMUSP00000150858 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000081274] [ENSMUST00000213247]
AlphaFold Q60894
Predicted Effect probably damaging
Transcript: ENSMUST00000081274
AA Change: D59V

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000080027
Gene: ENSMUSG00000061616
AA Change: D59V

DomainStartEndE-ValueType
transmembrane domain 13 30 N/A INTRINSIC
Pfam:7tm_4 38 314 8e-53 PFAM
Pfam:7tm_1 48 297 1.3e-17 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000213247
AA Change: D59V

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Meta Mutation Damage Score 0.6467 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.6%
  • 20x: 96.2%
Validation Efficiency 100% (49/49)
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 48 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam20 G A 8: 41,249,671 (GRCm39) V594I possibly damaging Het
Adgb A T 10: 10,318,227 (GRCm39) probably null Het
Adgrb3 A C 1: 25,150,906 (GRCm39) L1109R probably damaging Het
Angptl4 G A 17: 33,996,008 (GRCm39) P323S possibly damaging Het
Arhgap21 A T 2: 20,864,717 (GRCm39) M1197K probably damaging Het
Arhgef40 A G 14: 52,239,742 (GRCm39) T1319A probably damaging Het
C4bp A G 1: 130,575,764 (GRCm39) probably null Het
Cd200r1 T C 16: 44,610,374 (GRCm39) S161P possibly damaging Het
Ckap5 A G 2: 91,445,495 (GRCm39) K1711E possibly damaging Het
Cldn19 T C 4: 119,114,094 (GRCm39) S79P possibly damaging Het
Cplane1 T C 15: 8,251,427 (GRCm39) S1900P probably benign Het
Dnah17 T G 11: 117,915,533 (GRCm39) N4334T probably damaging Het
Dpm2 G A 2: 32,462,412 (GRCm39) probably null Het
Eef1a2 A T 2: 180,794,626 (GRCm39) V191E probably damaging Het
Gmds G A 13: 32,411,248 (GRCm39) T62I probably damaging Het
Hyal5 A T 6: 24,876,630 (GRCm39) I168F probably damaging Het
Idh3a T C 9: 54,499,679 (GRCm39) V31A probably benign Het
Inf2 C A 12: 112,577,264 (GRCm39) A1036E unknown Het
Kcnd3 C T 3: 105,566,082 (GRCm39) A421V probably damaging Het
Kidins220 T A 12: 25,051,564 (GRCm39) probably benign Het
Kirrel1 C T 3: 86,996,458 (GRCm39) M380I probably null Het
Lrp1b A G 2: 41,335,206 (GRCm39) C779R probably damaging Het
Lrp2 A G 2: 69,289,816 (GRCm39) probably null Het
Lrp2 G A 2: 69,379,391 (GRCm39) T107M probably damaging Het
Lrpap1 T C 5: 35,255,547 (GRCm39) E184G probably benign Het
Mapre1 C T 2: 153,588,201 (GRCm39) T8M possibly damaging Het
Mms19 G A 19: 41,954,695 (GRCm39) Q75* probably null Het
Mtcl1 T C 17: 66,649,949 (GRCm39) I1390V probably damaging Het
Muc5b A G 7: 141,411,289 (GRCm39) S1412G unknown Het
Myh4 A T 11: 67,148,009 (GRCm39) Q1686L probably benign Het
Or1e25 A T 11: 73,493,979 (GRCm39) D191V probably damaging Het
Rcvrn A T 11: 67,590,802 (GRCm39) I129F probably damaging Het
Reg3b T A 6: 78,348,216 (GRCm39) M10K possibly damaging Het
Rimbp2 T A 5: 128,850,529 (GRCm39) E918V probably damaging Het
Rpl5 A G 5: 108,051,667 (GRCm39) T154A probably benign Het
Sall4 A C 2: 168,598,162 (GRCm39) L195R probably damaging Het
Sh3gl2 T C 4: 85,297,618 (GRCm39) S199P possibly damaging Het
Shank1 G T 7: 43,994,416 (GRCm39) R859L unknown Het
Thsd7b A G 1: 130,117,919 (GRCm39) E1445G possibly damaging Het
Tnfaip6 A G 2: 51,942,339 (GRCm39) E216G probably benign Het
Tram1 T C 1: 13,639,827 (GRCm39) T307A probably benign Het
Trpv5 A G 6: 41,637,277 (GRCm39) V354A probably benign Het
Tyro3 A G 2: 119,643,774 (GRCm39) E745G probably damaging Het
Vmn1r68 A T 7: 10,261,408 (GRCm39) I230N probably damaging Het
Vmn2r28 A T 7: 5,491,357 (GRCm39) W297R probably damaging Het
Vrk3 A T 7: 44,412,460 (GRCm39) probably null Het
Zfhx4 T C 3: 5,465,845 (GRCm39) V2001A probably benign Het
Zfp512b AG AGG 2: 181,230,556 (GRCm39) probably null Het
Other mutations in Or9s13
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01085:Or9s13 APN 1 92,547,921 (GRCm39) missense possibly damaging 0.88
IGL01309:Or9s13 APN 1 92,548,057 (GRCm39) missense probably damaging 1.00
IGL02025:Or9s13 APN 1 92,548,269 (GRCm39) missense probably benign 0.00
IGL02517:Or9s13 APN 1 92,548,183 (GRCm39) missense probably benign
IGL02837:Or9s13 UTSW 1 92,548,404 (GRCm39) missense possibly damaging 0.73
R1394:Or9s13 UTSW 1 92,548,267 (GRCm39) missense probably benign 0.02
R1395:Or9s13 UTSW 1 92,548,267 (GRCm39) missense probably benign 0.02
R1590:Or9s13 UTSW 1 92,548,467 (GRCm39) missense possibly damaging 0.64
R1778:Or9s13 UTSW 1 92,548,342 (GRCm39) missense possibly damaging 0.94
R1924:Or9s13 UTSW 1 92,548,525 (GRCm39) missense probably damaging 1.00
R2011:Or9s13 UTSW 1 92,548,471 (GRCm39) missense probably benign 0.01
R5286:Or9s13 UTSW 1 92,548,084 (GRCm39) missense probably benign 0.38
R5513:Or9s13 UTSW 1 92,548,102 (GRCm39) missense probably benign
R5727:Or9s13 UTSW 1 92,547,900 (GRCm39) missense probably benign 0.00
R5905:Or9s13 UTSW 1 92,547,864 (GRCm39) missense possibly damaging 0.49
R5921:Or9s13 UTSW 1 92,548,344 (GRCm39) missense probably benign 0.01
R7614:Or9s13 UTSW 1 92,548,183 (GRCm39) missense probably damaging 0.99
R7959:Or9s13 UTSW 1 92,548,029 (GRCm39) missense probably damaging 0.96
R8073:Or9s13 UTSW 1 92,547,806 (GRCm39) missense probably damaging 1.00
R8161:Or9s13 UTSW 1 92,548,078 (GRCm39) missense probably benign 0.00
R8680:Or9s13 UTSW 1 92,547,643 (GRCm39) missense probably benign 0.10
Predicted Primers PCR Primer
(F):5'- TGCATCTGACCCCACTCATG -3'
(R):5'- TGAAACGATCATAGGCCATCAC -3'

Sequencing Primer
(F):5'- ACTCATGGCCACAGCAGTG -3'
(R):5'- AAGTCTCAGTGGTAGCCAAC -3'
Posted On 2015-04-06