Incidental Mutation 'R3838:Or10w1'
| ID |
277033 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or10w1
|
| Ensembl Gene |
ENSMUSG00000061387 |
| Gene Name |
olfactory receptor family 10 subfamily W member 1 |
| Synonyms |
Olfr1490, GA_x6K02T2RE5P-3987000-3987950, MOR266-6P |
| MMRRC Submission |
040779-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.128)
|
| Stock # |
R3838 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
19 |
| Chromosomal Location |
13631810-13632760 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 13632321 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Aspartic acid to Glycine
at position 176
(D176G)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000151186
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000080162]
[ENSMUST00000208667]
[ENSMUST00000213900]
|
| AlphaFold |
A0A1L1SVH0 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000080162
AA Change: D171G
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| SMART Domains |
Protein: ENSMUSP00000079057
Gene: ENSMUSG00000061387
AA Change: D171G
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
5.3e-48 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
2e-22 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000208667
AA Change: D176G
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213900
AA Change: D176G
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000216631
|
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.8%
- 10x: 97.8%
- 20x: 96.4%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 58 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4930486L24Rik |
A |
G |
13: 60,993,041 (GRCm39) |
Y213H |
probably damaging |
Het |
| Alg8 |
C |
T |
7: 97,037,752 (GRCm39) |
H379Y |
probably damaging |
Het |
| Arhgef25 |
T |
C |
10: 127,025,605 (GRCm39) |
T12A |
probably benign |
Het |
| Arid4a |
A |
G |
12: 71,122,559 (GRCm39) |
E980G |
possibly damaging |
Het |
| Aspm |
C |
T |
1: 139,405,792 (GRCm39) |
H1560Y |
probably benign |
Het |
| Atg10 |
A |
T |
13: 91,085,499 (GRCm39) |
I150K |
probably damaging |
Het |
| Bud13 |
A |
C |
9: 46,201,490 (GRCm39) |
Q387P |
possibly damaging |
Het |
| Champ1 |
A |
G |
8: 13,929,939 (GRCm39) |
Y699C |
probably damaging |
Het |
| Clstn1 |
A |
G |
4: 149,722,790 (GRCm39) |
E476G |
probably damaging |
Het |
| Col2a1 |
T |
C |
15: 97,886,857 (GRCm39) |
D345G |
unknown |
Het |
| Col2a1 |
A |
T |
15: 97,898,462 (GRCm39) |
|
probably benign |
Het |
| Col9a2 |
C |
G |
4: 120,911,455 (GRCm39) |
R599G |
probably damaging |
Het |
| Dnajb2 |
G |
A |
1: 75,218,124 (GRCm39) |
|
probably null |
Het |
| Dock4 |
G |
T |
12: 40,844,623 (GRCm39) |
|
probably null |
Het |
| Epx |
A |
T |
11: 87,765,656 (GRCm39) |
L101Q |
probably damaging |
Het |
| F13a1 |
A |
T |
13: 37,231,398 (GRCm39) |
N21K |
probably damaging |
Het |
| Fam13c |
C |
T |
10: 70,378,478 (GRCm39) |
S336L |
probably damaging |
Het |
| Foxj3 |
T |
A |
4: 119,473,821 (GRCm39) |
H215Q |
possibly damaging |
Het |
| Gcnt4 |
A |
T |
13: 97,083,522 (GRCm39) |
R273* |
probably null |
Het |
| Gpam |
T |
C |
19: 55,068,890 (GRCm39) |
N450S |
probably benign |
Het |
| Hivep2 |
C |
A |
10: 14,004,713 (GRCm39) |
T437K |
probably benign |
Het |
| Hmcn2 |
T |
C |
2: 31,303,419 (GRCm39) |
L3020P |
probably damaging |
Het |
| Hmgcr |
A |
G |
13: 96,795,597 (GRCm39) |
I324T |
probably benign |
Het |
| Ighmbp2 |
T |
C |
19: 3,321,658 (GRCm39) |
Y367C |
probably benign |
Het |
| Lrrc14b |
A |
G |
13: 74,511,664 (GRCm39) |
C139R |
possibly damaging |
Het |
| Lsamp |
A |
T |
16: 41,954,675 (GRCm39) |
E174V |
possibly damaging |
Het |
| Mid1ip1 |
T |
C |
X: 10,584,620 (GRCm39) |
V51A |
possibly damaging |
Het |
| Mrc2 |
G |
A |
11: 105,239,257 (GRCm39) |
|
probably null |
Het |
| Msn |
C |
A |
X: 95,203,805 (GRCm39) |
Q303K |
probably damaging |
Het |
| Myh7b |
A |
G |
2: 155,474,909 (GRCm39) |
K1816E |
probably damaging |
Het |
| Nap1l1 |
T |
A |
10: 111,331,183 (GRCm39) |
|
probably null |
Het |
| Nme2 |
T |
A |
11: 93,840,803 (GRCm39) |
E252D |
probably benign |
Het |
| Ntpcr |
G |
A |
8: 126,464,111 (GRCm39) |
V79M |
probably damaging |
Het |
| Ogdh |
C |
T |
11: 6,288,627 (GRCm39) |
R235* |
probably null |
Het |
| Or10d1 |
A |
G |
9: 39,484,267 (GRCm39) |
V96A |
probably benign |
Het |
| Or9k2 |
C |
A |
10: 129,998,275 (GRCm39) |
E307* |
probably null |
Het |
| P3r3urf |
A |
G |
4: 116,030,718 (GRCm39) |
T41A |
probably benign |
Het |
| Pcdh20 |
T |
C |
14: 88,705,899 (GRCm39) |
N467S |
probably benign |
Het |
| Pkhd1 |
G |
A |
1: 20,604,853 (GRCm39) |
T1154I |
possibly damaging |
Het |
| Polq |
G |
T |
16: 36,898,711 (GRCm39) |
R2157I |
probably damaging |
Het |
| Reep6 |
C |
A |
10: 80,171,723 (GRCm39) |
A533E |
probably damaging |
Het |
| Senp2 |
T |
C |
16: 21,828,485 (GRCm39) |
S32P |
probably damaging |
Het |
| Septin11 |
T |
A |
5: 93,296,258 (GRCm39) |
I52N |
probably damaging |
Het |
| Shld2 |
T |
C |
14: 33,967,325 (GRCm39) |
D77G |
probably benign |
Het |
| Slc17a4 |
C |
T |
13: 24,085,752 (GRCm39) |
R387H |
probably benign |
Het |
| Spdye4b |
C |
T |
5: 143,178,084 (GRCm39) |
T11I |
probably benign |
Het |
| Srrt |
C |
T |
5: 137,300,387 (GRCm39) |
|
probably null |
Het |
| Sspo |
T |
A |
6: 48,457,754 (GRCm39) |
C3085S |
probably damaging |
Het |
| Stim1 |
C |
T |
7: 102,060,503 (GRCm39) |
T182I |
possibly damaging |
Het |
| Thbs2 |
C |
A |
17: 14,908,113 (GRCm39) |
V217L |
probably benign |
Het |
| Thpo |
G |
A |
16: 20,547,498 (GRCm39) |
R38C |
probably damaging |
Het |
| Tmem210 |
A |
G |
2: 25,178,444 (GRCm39) |
E35G |
possibly damaging |
Het |
| Trim12c |
T |
A |
7: 103,990,075 (GRCm39) |
|
probably benign |
Het |
| Tvp23b |
A |
G |
11: 62,774,455 (GRCm39) |
H33R |
possibly damaging |
Het |
| Usp14 |
A |
G |
18: 10,024,532 (GRCm39) |
|
probably null |
Het |
| Vmn2r73 |
A |
G |
7: 85,507,258 (GRCm39) |
W685R |
probably benign |
Het |
| Zfp618 |
G |
A |
4: 63,051,801 (GRCm39) |
A861T |
probably benign |
Het |
| Zfp715 |
A |
G |
7: 42,949,180 (GRCm39) |
V260A |
probably benign |
Het |
|
| Other mutations in Or10w1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01324:Or10w1
|
APN |
19 |
13,632,297 (GRCm39) |
missense |
probably damaging |
0.96 |
|
IGL01335:Or10w1
|
APN |
19 |
13,632,540 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01561:Or10w1
|
APN |
19 |
13,632,269 (GRCm39) |
missense |
probably benign |
|
|
IGL01644:Or10w1
|
APN |
19 |
13,632,768 (GRCm39) |
utr 3 prime |
probably benign |
|
|
IGL02257:Or10w1
|
APN |
19 |
13,632,629 (GRCm39) |
missense |
probably benign |
|
|
IGL02282:Or10w1
|
APN |
19 |
13,632,622 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02355:Or10w1
|
APN |
19 |
13,632,597 (GRCm39) |
missense |
probably benign |
0.02 |
|
IGL02362:Or10w1
|
APN |
19 |
13,632,597 (GRCm39) |
missense |
probably benign |
0.02 |
|
IGL02639:Or10w1
|
APN |
19 |
13,631,960 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R0078:Or10w1
|
UTSW |
19 |
13,632,179 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0278:Or10w1
|
UTSW |
19 |
13,632,129 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0278:Or10w1
|
UTSW |
19 |
13,632,128 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0506:Or10w1
|
UTSW |
19 |
13,632,261 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R0927:Or10w1
|
UTSW |
19 |
13,631,816 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1087:Or10w1
|
UTSW |
19 |
13,632,376 (GRCm39) |
nonsense |
probably null |
|
|
R1762:Or10w1
|
UTSW |
19 |
13,631,868 (GRCm39) |
missense |
probably benign |
|
|
R2901:Or10w1
|
UTSW |
19 |
13,632,309 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2907:Or10w1
|
UTSW |
19 |
13,632,611 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R3625:Or10w1
|
UTSW |
19 |
13,632,346 (GRCm39) |
nonsense |
probably null |
|
|
R4745:Or10w1
|
UTSW |
19 |
13,632,750 (GRCm39) |
missense |
probably benign |
|
|
R4804:Or10w1
|
UTSW |
19 |
13,631,882 (GRCm39) |
missense |
probably benign |
|
|
R5026:Or10w1
|
UTSW |
19 |
13,632,296 (GRCm39) |
missense |
probably benign |
0.03 |
|
R5314:Or10w1
|
UTSW |
19 |
13,632,630 (GRCm39) |
missense |
probably benign |
0.08 |
|
R6052:Or10w1
|
UTSW |
19 |
13,631,871 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R6235:Or10w1
|
UTSW |
19 |
13,632,145 (GRCm39) |
nonsense |
probably null |
|
|
R7405:Or10w1
|
UTSW |
19 |
13,632,246 (GRCm39) |
missense |
probably benign |
0.14 |
|
R7557:Or10w1
|
UTSW |
19 |
13,632,390 (GRCm39) |
missense |
possibly damaging |
0.71 |
|
R8038:Or10w1
|
UTSW |
19 |
13,632,719 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R8338:Or10w1
|
UTSW |
19 |
13,632,216 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R8366:Or10w1
|
UTSW |
19 |
13,631,903 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8496:Or10w1
|
UTSW |
19 |
13,632,388 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R8783:Or10w1
|
UTSW |
19 |
13,632,323 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8838:Or10w1
|
UTSW |
19 |
13,632,371 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R8859:Or10w1
|
UTSW |
19 |
13,632,246 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9064:Or10w1
|
UTSW |
19 |
13,632,719 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R9161:Or10w1
|
UTSW |
19 |
13,632,038 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9466:Or10w1
|
UTSW |
19 |
13,631,796 (GRCm39) |
start codon destroyed |
probably null |
|
|
R9596:Or10w1
|
UTSW |
19 |
13,632,002 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9623:Or10w1
|
UTSW |
19 |
13,632,414 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1176:Or10w1
|
UTSW |
19 |
13,631,827 (GRCm39) |
missense |
probably benign |
0.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- TGCCACTCAGATGGTTTTCC -3'
(R):5'- TGAGTGGAGTTTGAGCACAG -3'
Sequencing Primer
(F):5'- CAGATGGTTTTCCTCATTGGAC -3'
(R):5'- AGTTTGAGCACAGCAGCC -3'
|
| Posted On |
2015-04-06 |
Incidental Mutation