Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00976:Stk38l'

27706

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Stk38l

Ensembl Gene

ENSMUSG00000001630

Gene Name

serine/threonine kinase 38 like

Synonyms

Ndr2, 4930473A22Rik

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.664) question?

Stock #

IGL00976

Quality Score

Status

Chromosome

Chromosomal Location

146626493-146680310 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 146676900 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 393 (E393G)

Ref Sequence

ENSEMBL: ENSMUSP00000107271 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000001675] [ENSMUST00000111644]

AlphaFold

Q7TSE6

Predicted Effect

probably benign
Transcript: ENSMUST00000001675
AA Change: E393G

PolyPhen 2 Score 0.374 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000001675
Gene: ENSMUSG00000001630
AA Change: E393G

Domain	Start	End	E-Value	Type
S_TKc	90	383	5.62e-100	SMART
S_TK_X	384	445	2.88e-2	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000111644
AA Change: E393G

PolyPhen 2 Score 0.374 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000107271
Gene: ENSMUSG00000001630
AA Change: E393G

Domain	Start	End	E-Value	Type
S_TKc	90	383	5.62e-100	SMART
S_TK_X	384	452	3.66e-1	SMART

Coding Region Coverage

Validation Efficiency

MGI Phenotype

PHENOTYPE: Homozygous gene-trapped mice exhibit premature dendritic branching of CA3 pyramidal neurons. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 37 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930519F16Rik	A	G	X: 102,226,868 (GRCm39)		probably benign	Het
Aldob	C	A	4: 49,541,220 (GRCm39)	V151L	probably damaging	Het
Cacna1i	G	A	15: 80,239,846 (GRCm39)	M298I	probably benign	Het
Capn3	A	G	2: 120,322,382 (GRCm39)	N414S	possibly damaging	Het
Ccdc186	G	A	19: 56,785,932 (GRCm39)	T701M	probably damaging	Het
Ccdc190	A	T	1: 169,761,309 (GRCm39)	H137L	probably benign	Het
Clhc1	G	A	11: 29,511,389 (GRCm39)	D278N	probably benign	Het
Cntnap3	T	C	13: 64,942,166 (GRCm39)	Y188C	probably damaging	Het
Dnah1	A	C	14: 31,000,095 (GRCm39)	V2466G	probably damaging	Het
Dnah8	A	G	17: 31,070,684 (GRCm39)	T4457A	probably damaging	Het
Hectd4	A	G	5: 121,487,169 (GRCm39)	Q3388R	probably benign	Het
Hecw1	T	A	13: 14,493,557 (GRCm39)	D316V	probably damaging	Het
Il1rap	T	C	16: 26,517,589 (GRCm39)	V263A	probably benign	Het
Il6	G	A	5: 30,219,839 (GRCm39)	G72S	probably benign	Het
Katnal2	T	C	18: 77,105,189 (GRCm39)	Y86C	probably damaging	Het
Kdm7a	G	T	6: 39,121,332 (GRCm39)	S874R	possibly damaging	Het
Mybpc2	T	C	7: 44,171,741 (GRCm39)		probably null	Het
Nphs1	T	G	7: 30,160,110 (GRCm39)	S130A	possibly damaging	Het
Ntrk3	C	T	7: 78,100,701 (GRCm39)	V444I	probably benign	Het
Numbl	T	C	7: 26,968,235 (GRCm39)	V144A	possibly damaging	Het
Or8g33	T	A	9: 39,337,953 (GRCm39)	Y138F	probably benign	Het
P2rx1	T	C	11: 72,903,826 (GRCm39)		probably null	Het
Pcdhb3	G	A	18: 37,436,001 (GRCm39)	V656I	probably benign	Het
Pole	A	G	5: 110,471,438 (GRCm39)	Y1394C	probably benign	Het
Pramel24	T	A	4: 143,453,585 (GRCm39)	M231K	probably damaging	Het
Rbm47	A	G	5: 66,184,081 (GRCm39)	V174A	possibly damaging	Het
Rhox4f	T	C	X: 36,786,048 (GRCm39)		probably benign	Het
Serpina12	T	C	12: 103,998,787 (GRCm39)	Y317C	probably damaging	Het
Slc12a5	T	A	2: 164,821,224 (GRCm39)	I236N	probably damaging	Het
Slc4a4	G	A	5: 89,102,657 (GRCm39)	G32R	probably damaging	Het
Slco1a4	T	C	6: 141,752,908 (GRCm39)		probably null	Het
Sorcs3	A	T	19: 48,755,542 (GRCm39)	N894I	probably damaging	Het
Synpo	A	G	18: 60,736,491 (GRCm39)	I485T	possibly damaging	Het
Tenm3	T	A	8: 48,709,876 (GRCm39)	M1687L	probably benign	Het
Ttc39c	T	C	18: 12,817,952 (GRCm39)		probably benign	Het
Unc13d	T	C	11: 115,961,293 (GRCm39)	E378G	probably damaging	Het
Vmn2r118	T	A	17: 55,900,204 (GRCm39)	N567Y	probably damaging	Het

Other mutations in Stk38l

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00225:Stk38l	APN	6	146,659,971 (GRCm39)	start codon destroyed	probably null	0.05
IGL01607:Stk38l	APN	6	146,673,725 (GRCm39)	splice site	probably benign
IGL01607:Stk38l	APN	6	146,673,152 (GRCm39)	missense	probably damaging	0.99
IGL02552:Stk38l	APN	6	146,669,031 (GRCm39)	missense	probably damaging	1.00
IGL02582:Stk38l	APN	6	146,668,321 (GRCm39)	critical splice donor site	probably null
IGL03036:Stk38l	APN	6	146,670,372 (GRCm39)	missense	probably damaging	1.00
R0445:Stk38l	UTSW	6	146,677,184 (GRCm39)	missense	probably benign
R1518:Stk38l	UTSW	6	146,673,129 (GRCm39)	missense	probably benign	0.09
R2117:Stk38l	UTSW	6	146,670,344 (GRCm39)	missense	probably damaging	1.00
R5297:Stk38l	UTSW	6	146,677,153 (GRCm39)	nonsense	probably null
R5602:Stk38l	UTSW	6	146,659,998 (GRCm39)	missense	probably benign	0.39
R5652:Stk38l	UTSW	6	146,674,826 (GRCm39)	missense	possibly damaging	0.91
R6830:Stk38l	UTSW	6	146,668,269 (GRCm39)	missense	possibly damaging	0.88
R7572:Stk38l	UTSW	6	146,677,152 (GRCm39)	missense	probably damaging	1.00
R8028:Stk38l	UTSW	6	146,674,881 (GRCm39)	missense	probably damaging	1.00
R8120:Stk38l	UTSW	6	146,660,099 (GRCm39)	missense	probably benign
R8142:Stk38l	UTSW	6	146,660,070 (GRCm39)	missense	probably benign	0.33
R8483:Stk38l	UTSW	6	146,660,017 (GRCm39)	missense	possibly damaging	0.74
R9153:Stk38l	UTSW	6	146,660,048 (GRCm39)	missense	probably benign	0.10
R9706:Stk38l	UTSW	6	146,677,104 (GRCm39)	missense	probably benign	0.00

Posted On

2013-04-17