Mutagenetix > Incidental Mutation

Incidental Mutation 'R3841:4921524L21Rik'

277186

Institutional Source

Beutler Lab

Gene Symbol

4921524L21Rik

Ensembl Gene

ENSMUSG00000039540

Gene Name

RIKEN cDNA 4921524L21 gene

Synonyms

MMRRC Submission

040781-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.069) question?

Stock #

R3841 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

6603629-6638970 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 6620104 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Asparagine at position 11 (K11N)

Ref Sequence

ENSEMBL: ENSMUSP00000035514 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000044829]

AlphaFold

Q9D5T2

Predicted Effect

probably benign
Transcript: ENSMUST00000044829
AA Change: K11N

PolyPhen 2 Score 0.439 (Sensitivity: 0.89; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000035514
Gene: ENSMUSG00000039540
AA Change: K11N

Domain	Start	End	E-Value	Type
Pfam:DUF3496	131	235	6.9e-12	PFAM
coiled coil region	269	292	N/A	INTRINSIC
low complexity region	408	419	N/A	INTRINSIC

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.4%
20x: 95.2%

Validation Efficiency

98% (43/44)

Allele List at MGI

Other mutations in this stock

Total: 43 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Atp8b3	A	G	10: 80,365,540 (GRCm39)	F405L	possibly damaging	Het
BC035947	G	T	1: 78,474,482 (GRCm39)	N683K	probably benign	Het
Bmper	T	A	9: 23,384,727 (GRCm39)		probably null	Het
Btnl7-ps	A	G	17: 34,761,550 (GRCm39)		noncoding transcript	Het
Cmya5	A	G	13: 93,231,140 (GRCm39)	V1316A	probably damaging	Het
Cracd	A	T	5: 77,006,858 (GRCm39)	Q1073L	unknown	Het
Dgcr6	C	A	16: 17,888,077 (GRCm39)	Y200*	probably null	Het
Dsp	A	C	13: 38,381,681 (GRCm39)	I2210L	probably benign	Het
Eef1e1	G	A	13: 38,840,167 (GRCm39)	T46I	probably damaging	Het
Epc2	A	G	2: 49,378,750 (GRCm39)	K68R	probably damaging	Het
F11r	G	T	1: 171,288,457 (GRCm39)	R100L	probably damaging	Het
Fam83c	C	T	2: 155,676,668 (GRCm39)	R34H	probably benign	Het
Fbxw25	A	T	9: 109,491,202 (GRCm39)	Y105*	probably null	Het
Ggt1	T	A	10: 75,417,219 (GRCm39)	Y5*	probably null	Het
Hipk2	T	C	6: 38,795,861 (GRCm39)	E136G	probably damaging	Het
Hsph1	T	A	5: 149,544,180 (GRCm39)		probably null	Het
Impdh1	A	G	6: 29,202,768 (GRCm39)	S421P	probably damaging	Het
Jhy	T	A	9: 40,856,142 (GRCm39)	E115V	probably benign	Het
Kmt2a	T	C	9: 44,742,588 (GRCm39)		probably benign	Het
Ldlrap1	T	C	4: 134,477,747 (GRCm39)	T159A	probably damaging	Het
Lrrc4c	A	G	2: 97,460,537 (GRCm39)	T388A	probably damaging	Het
Map3k10	C	A	7: 27,357,789 (GRCm39)	C663F	possibly damaging	Het
Me3	A	T	7: 89,435,701 (GRCm39)	N179Y	possibly damaging	Het
Medag	T	A	5: 149,350,888 (GRCm39)	I121N	probably damaging	Het
Mocos	C	T	18: 24,809,681 (GRCm39)	A428V	probably damaging	Het
Mok	C	T	12: 110,781,591 (GRCm39)	V59M	probably benign	Het
Neb	C	A	2: 52,097,672 (GRCm39)		probably null	Het
Nr2c2	C	T	6: 92,140,119 (GRCm39)	R464W	probably damaging	Het
Or52s1	G	A	7: 102,861,900 (GRCm39)	G267R	probably damaging	Het
Or6c35	A	G	10: 129,169,202 (GRCm39)	I151V	probably benign	Het
Otud1	G	T	2: 19,663,554 (GRCm39)	E228*	probably null	Het
Parp4	A	T	14: 56,825,235 (GRCm39)	N120Y	probably damaging	Het
Ptprb	T	C	10: 116,182,887 (GRCm39)	V1521A	possibly damaging	Het
Rap1gap	T	C	4: 137,444,758 (GRCm39)	F182S	probably damaging	Het
Rcan2	A	G	17: 44,347,870 (GRCm39)	K193R	probably benign	Het
Rdh19	A	T	10: 127,692,755 (GRCm39)	M141L	probably benign	Het
Selenok	C	T	14: 29,695,337 (GRCm39)	R72*	probably null	Het
Tbpl1	A	G	10: 22,587,807 (GRCm39)		probably benign	Het
Tnxb	A	G	17: 34,917,897 (GRCm39)	E2270G	possibly damaging	Het
Tulp1	A	G	17: 28,572,689 (GRCm39)	V489A	probably damaging	Het
Utp20	A	T	10: 88,611,065 (GRCm39)		probably benign	Het
Zfp617	G	A	8: 72,685,961 (GRCm39)	G97E	probably damaging	Het
Zfp773	A	G	7: 7,135,390 (GRCm39)	V402A	possibly damaging	Het

Other mutations in 4921524L21Rik

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01286:4921524L21Rik	APN	18	6,629,578 (GRCm39)	missense	possibly damaging	0.93
IGL01402:4921524L21Rik	APN	18	6,638,653 (GRCm39)	missense	possibly damaging	0.65
IGL01404:4921524L21Rik	APN	18	6,638,653 (GRCm39)	missense	possibly damaging	0.65
IGL02680:4921524L21Rik	APN	18	6,635,949 (GRCm39)	splice site	probably benign
PIT4812001:4921524L21Rik	UTSW	18	6,630,053 (GRCm39)	missense	possibly damaging	0.93
R0532:4921524L21Rik	UTSW	18	6,638,618 (GRCm39)	missense	possibly damaging	0.83
R1069:4921524L21Rik	UTSW	18	6,624,037 (GRCm39)	missense	probably benign	0.01
R1706:4921524L21Rik	UTSW	18	6,624,059 (GRCm39)	splice site	probably benign
R1768:4921524L21Rik	UTSW	18	6,623,470 (GRCm39)	missense	possibly damaging	0.72
R1912:4921524L21Rik	UTSW	18	6,620,205 (GRCm39)	missense	possibly damaging	0.72
R3820:4921524L21Rik	UTSW	18	6,630,166 (GRCm39)	critical splice donor site	probably null
R3840:4921524L21Rik	UTSW	18	6,620,104 (GRCm39)	missense	probably benign	0.44
R4201:4921524L21Rik	UTSW	18	6,623,952 (GRCm39)	critical splice acceptor site	probably null
R4852:4921524L21Rik	UTSW	18	6,623,488 (GRCm39)	missense	probably damaging	0.99
R4852:4921524L21Rik	UTSW	18	6,623,487 (GRCm39)	missense	possibly damaging	0.91
R5218:4921524L21Rik	UTSW	18	6,629,628 (GRCm39)	missense	possibly damaging	0.63
R5389:4921524L21Rik	UTSW	18	6,638,795 (GRCm39)	missense	probably benign	0.14
R5428:4921524L21Rik	UTSW	18	6,635,918 (GRCm39)	missense	probably benign	0.04
R5873:4921524L21Rik	UTSW	18	6,630,167 (GRCm39)	critical splice donor site	probably null
R6120:4921524L21Rik	UTSW	18	6,638,795 (GRCm39)	missense	possibly damaging	0.85
R6345:4921524L21Rik	UTSW	18	6,626,399 (GRCm39)	missense	possibly damaging	0.71
R7246:4921524L21Rik	UTSW	18	6,635,902 (GRCm39)	missense	probably damaging	0.98
R7296:4921524L21Rik	UTSW	18	6,626,385 (GRCm39)	missense	probably damaging	0.99
R8796:4921524L21Rik	UTSW	18	6,629,482 (GRCm39)	missense	possibly damaging	0.95
R8897:4921524L21Rik	UTSW	18	6,635,934 (GRCm39)	missense	probably damaging	0.98
R8930:4921524L21Rik	UTSW	18	6,629,693 (GRCm39)	critical splice donor site	probably null
R8932:4921524L21Rik	UTSW	18	6,629,693 (GRCm39)	critical splice donor site	probably null
R8991:4921524L21Rik	UTSW	18	6,620,232 (GRCm39)	missense	probably damaging	0.99
R9108:4921524L21Rik	UTSW	18	6,638,794 (GRCm39)	missense	probably benign	0.04
R9235:4921524L21Rik	UTSW	18	6,623,518 (GRCm39)	missense	possibly damaging	0.96
R9642:4921524L21Rik	UTSW	18	6,619,412 (GRCm39)	critical splice donor site	probably null
Z1177:4921524L21Rik	UTSW	18	6,635,865 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- GCCAATTTCCTGGGAAAACC -3'
(R):5'- GTATGTCAAATCAAGGGAGTGC -3'

Sequencing Primer
(F):5'- GACCATTTGAGTGTAAGTACT -3'
(R):5'- TGTCAAATCAAGGGAGTGCTATATG -3'

Posted On

2015-04-06