Incidental Mutation 'IGL00903:Gvin1'
ID 27773
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Gvin1
Ensembl Gene ENSMUSG00000045868
Gene Name GTPase, very large interferon inducible 1
Synonyms VLIG-1, Iigs1, 9130002C22Rik, VLIG, 9830104F22Rik
Accession Numbers
Essential gene? Not available question?
Stock # IGL00903
Quality Score
Status
Chromosome 7
Chromosomal Location 105755763-105814533 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 105757377 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Glycine at position 2364 (E2364G)
Ref Sequence ENSEMBL: ENSMUSP00000138950 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000006667] [ENSMUST00000183409]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000006667
AA Change: E2364G

PolyPhen 2 Score 0.005 (Sensitivity: 0.97; Specificity: 0.74)
SMART Domains Protein: ENSMUSP00000006667
Gene: ENSMUSG00000045868
AA Change: E2364G

DomainStartEndE-ValueType
low complexity region 104 116 N/A INTRINSIC
low complexity region 122 135 N/A INTRINSIC
Blast:PGAM 860 1554 7e-61 BLAST
coiled coil region 1625 1655 N/A INTRINSIC
low complexity region 1769 1781 N/A INTRINSIC
coiled coil region 1851 1877 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000183409
AA Change: E2364G

PolyPhen 2 Score 0.005 (Sensitivity: 0.97; Specificity: 0.74)
SMART Domains Protein: ENSMUSP00000138950
Gene: ENSMUSG00000045868
AA Change: E2364G

DomainStartEndE-ValueType
low complexity region 104 116 N/A INTRINSIC
low complexity region 122 135 N/A INTRINSIC
Blast:PGAM 860 1554 7e-61 BLAST
coiled coil region 1625 1655 N/A INTRINSIC
low complexity region 1769 1781 N/A INTRINSIC
coiled coil region 1851 1877 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 27 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Arsk A G 13: 76,246,487 (GRCm39) probably null Het
As3mt A G 19: 46,700,673 (GRCm39) I159V probably benign Het
Atpsckmt T C 15: 31,606,261 (GRCm39) V73A possibly damaging Het
Ctsll3 C A 13: 60,948,075 (GRCm39) V201L probably benign Het
Dapk1 T C 13: 60,909,211 (GRCm39) Y1275H probably damaging Het
Erap1 G A 13: 74,821,826 (GRCm39) R727H probably benign Het
Fcrl6 T A 1: 172,426,674 (GRCm39) T91S probably benign Het
Hacd3 T C 9: 64,911,535 (GRCm39) probably benign Het
Hcls1 T A 16: 36,776,383 (GRCm39) probably null Het
Igf2r C T 17: 12,902,754 (GRCm39) R2432H possibly damaging Het
Kif27 C A 13: 58,492,486 (GRCm39) V218F possibly damaging Het
Klhl20 T C 1: 160,918,076 (GRCm39) Y70C probably benign Het
Krt86 C T 15: 101,371,741 (GRCm39) H104Y probably benign Het
Lcn12 G T 2: 25,383,332 (GRCm39) N15K possibly damaging Het
Mrgpra1 T C 7: 46,985,326 (GRCm39) M118V probably benign Het
Nacad G T 11: 6,550,632 (GRCm39) T853K probably damaging Het
Nos3 A T 5: 24,574,860 (GRCm39) Q293L probably damaging Het
Prkca C T 11: 107,874,800 (GRCm39) V381M probably damaging Het
Ptcd3 A G 6: 71,884,828 (GRCm39) F37S possibly damaging Het
Ptgs2 A G 1: 149,980,175 (GRCm39) Y371C probably damaging Het
Pygl T C 12: 70,254,516 (GRCm39) Y143C probably damaging Het
Samhd1 A G 2: 156,949,343 (GRCm39) probably benign Het
Scube1 T A 15: 83,587,702 (GRCm39) H89L probably damaging Het
Tmem59l G A 8: 70,938,315 (GRCm39) probably benign Het
Vmn2r108 A G 17: 20,682,774 (GRCm39) V810A probably damaging Het
Vmn2r61 T G 7: 41,949,935 (GRCm39) F785C probably damaging Het
Zfas1 G T 2: 166,907,406 (GRCm39) probably benign Het
Other mutations in Gvin1
AlleleSourceChrCoordTypePredicted EffectPPH Score
R4860:Gvin1 UTSW 7 105,762,643 (GRCm39) missense possibly damaging 0.95
R4860:Gvin1 UTSW 7 105,762,643 (GRCm39) missense possibly damaging 0.95
R5648:Gvin1 UTSW 7 105,762,606 (GRCm39) missense possibly damaging 0.92
R5806:Gvin1 UTSW 7 105,757,413 (GRCm39) missense probably benign
R8355:Gvin1 UTSW 7 105,757,312 (GRCm39) missense possibly damaging 0.73
R8970:Gvin1 UTSW 7 105,762,647 (GRCm39) missense probably damaging 0.96
Posted On 2013-04-17