Incidental Mutation 'IGL01622:Vmn2r60'
ID 278613
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn2r60
Ensembl Gene ENSMUSG00000090619
Gene Name vomeronasal 2, receptor 60
Synonyms Casr-rs3, EG637898, Gprc2a-rs3
Accession Numbers
Essential gene? Probably non essential (E-score: 0.100) question?
Stock # IGL01622
Quality Score
Status
Chromosome 7
Chromosomal Location 41765895-41845200 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 41785910 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 238 (I238V)
Ref Sequence ENSEMBL: ENSMUSP00000128493 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000166447]
AlphaFold A0A3B2WBC8
Predicted Effect probably benign
Transcript: ENSMUST00000166447
AA Change: I238V

PolyPhen 2 Score 0.085 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000128493
Gene: ENSMUSG00000090619
AA Change: I238V

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 78 471 1.2e-44 PFAM
Pfam:NCD3G 514 567 5.1e-23 PFAM
Pfam:7tm_3 600 835 1.4e-51 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 54 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930596D02Rik G A 14: 35,532,024 (GRCm39) Q184* probably null Het
A1bg A C 15: 60,789,742 (GRCm39) I502S possibly damaging Het
Actl11 T C 9: 107,805,775 (GRCm39) S33P probably benign Het
Aftph G T 11: 20,659,632 (GRCm39) D730E probably damaging Het
Arhgap29 A G 3: 121,767,773 (GRCm39) probably benign Het
Brf1 T G 12: 112,924,795 (GRCm39) E643A probably benign Het
Caskin1 G T 17: 24,722,914 (GRCm39) probably null Het
Ccnjl T C 11: 43,476,154 (GRCm39) V259A probably benign Het
Ccser2 G T 14: 36,662,920 (GRCm39) T88K probably benign Het
Cdk17 T C 10: 93,074,824 (GRCm39) probably benign Het
Clec16a G A 16: 10,395,774 (GRCm39) S309N possibly damaging Het
Cpxm1 C A 2: 130,233,191 (GRCm39) A633S probably benign Het
Ctnnbl1 A T 2: 157,661,468 (GRCm39) N326I probably damaging Het
Cyp46a1 T C 12: 108,318,234 (GRCm39) V215A possibly damaging Het
Daxx A G 17: 34,132,454 (GRCm39) D528G probably benign Het
Dnah6 T C 6: 73,121,701 (GRCm39) Y1427C probably damaging Het
Dpy19l3 G A 7: 35,422,169 (GRCm39) T228I probably damaging Het
Fam131c C T 4: 141,109,761 (GRCm39) A131V possibly damaging Het
Fat1 A G 8: 45,482,592 (GRCm39) T3061A possibly damaging Het
Fgl2 T A 5: 21,578,175 (GRCm39) L154H possibly damaging Het
Fhod3 T A 18: 25,155,924 (GRCm39) I514K probably benign Het
Ficd G A 5: 113,876,622 (GRCm39) G266S probably damaging Het
Frem3 A G 8: 81,340,544 (GRCm39) T946A probably benign Het
Gan T A 8: 117,913,917 (GRCm39) V105D probably damaging Het
Garin5b A G 7: 4,761,722 (GRCm39) V330A probably benign Het
Gramd1c A G 16: 43,811,061 (GRCm39) V221A probably damaging Het
Hacd1 A G 2: 14,040,667 (GRCm39) V196A probably benign Het
Kcna6 C A 6: 126,715,576 (GRCm39) V438L probably damaging Het
Kif14 T C 1: 136,425,094 (GRCm39) probably benign Het
Klhl41 T C 2: 69,508,582 (GRCm39) V512A probably benign Het
Lrfn1 A G 7: 28,166,111 (GRCm39) T502A probably damaging Het
Notch3 A T 17: 32,377,844 (GRCm39) F105I possibly damaging Het
Or4b13 T G 2: 90,082,953 (GRCm39) K126N probably damaging Het
Or5m10 A T 2: 85,717,306 (GRCm39) H54L probably benign Het
P3h1 C T 4: 119,092,480 (GRCm39) T171I probably damaging Het
Pcdhb1 A G 18: 37,399,366 (GRCm39) E439G possibly damaging Het
Pik3c3 A T 18: 30,423,578 (GRCm39) K225* probably null Het
Pik3c3 A G 18: 30,426,102 (GRCm39) probably benign Het
Pik3r5 T A 11: 68,377,452 (GRCm39) probably null Het
Pnpt1 A C 11: 29,098,272 (GRCm39) probably benign Het
Ppp2r1b T A 9: 50,789,422 (GRCm39) V495D probably damaging Het
Rbfox3 C A 11: 118,396,440 (GRCm39) probably benign Het
Sec14l2 G A 11: 4,053,966 (GRCm39) P234S possibly damaging Het
Sec16a A C 2: 26,328,915 (GRCm39) D1033E probably benign Het
Septin14 A G 5: 129,763,019 (GRCm39) V357A probably damaging Het
Sf3a3 C T 4: 124,612,136 (GRCm39) T131I possibly damaging Het
Snrpa A T 7: 26,892,395 (GRCm39) M55K probably benign Het
Swt1 G T 1: 151,286,760 (GRCm39) T244N probably benign Het
Tbl1xr1 A G 3: 22,246,238 (GRCm39) T253A probably benign Het
Tst G T 15: 78,283,964 (GRCm39) R288S probably benign Het
Zbtb14 A G 17: 69,695,184 (GRCm39) K294R probably benign Het
Zfp710 T A 7: 79,730,871 (GRCm39) V16E probably damaging Het
Zfpm2 A G 15: 40,965,320 (GRCm39) T602A probably benign Het
Zfr2 G A 10: 81,087,193 (GRCm39) M850I probably benign Het
Other mutations in Vmn2r60
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01623:Vmn2r60 APN 7 41,785,910 (GRCm39) missense probably benign 0.09
IGL02363:Vmn2r60 APN 7 41,844,578 (GRCm39) missense probably benign 0.02
IGL02485:Vmn2r60 APN 7 41,844,890 (GRCm39) missense possibly damaging 0.54
IGL02651:Vmn2r60 APN 7 41,845,010 (GRCm39) missense probably damaging 0.99
IGL02660:Vmn2r60 APN 7 41,791,720 (GRCm39) nonsense probably null
IGL03135:Vmn2r60 APN 7 41,786,018 (GRCm39) missense probably benign 0.13
IGL03307:Vmn2r60 APN 7 41,765,971 (GRCm39) missense probably benign 0.14
R0310:Vmn2r60 UTSW 7 41,844,564 (GRCm39) missense possibly damaging 0.54
R0314:Vmn2r60 UTSW 7 41,784,985 (GRCm39) splice site probably benign
R0328:Vmn2r60 UTSW 7 41,791,744 (GRCm39) splice site probably benign
R0464:Vmn2r60 UTSW 7 41,785,255 (GRCm39) missense probably damaging 0.99
R0755:Vmn2r60 UTSW 7 41,844,869 (GRCm39) missense probably damaging 1.00
R1119:Vmn2r60 UTSW 7 41,844,365 (GRCm39) missense possibly damaging 0.68
R1162:Vmn2r60 UTSW 7 41,845,195 (GRCm39) missense probably benign 0.29
R1241:Vmn2r60 UTSW 7 41,786,476 (GRCm39) missense probably benign 0.01
R1404:Vmn2r60 UTSW 7 41,786,211 (GRCm39) missense probably damaging 0.99
R1404:Vmn2r60 UTSW 7 41,786,211 (GRCm39) missense probably damaging 0.99
R1488:Vmn2r60 UTSW 7 41,786,137 (GRCm39) missense probably benign 0.17
R1623:Vmn2r60 UTSW 7 41,785,279 (GRCm39) nonsense probably null
R1628:Vmn2r60 UTSW 7 41,785,830 (GRCm39) nonsense probably null
R1883:Vmn2r60 UTSW 7 41,786,094 (GRCm39) missense probably damaging 0.99
R1884:Vmn2r60 UTSW 7 41,786,094 (GRCm39) missense probably damaging 0.99
R2182:Vmn2r60 UTSW 7 41,844,931 (GRCm39) missense probably benign 0.06
R2275:Vmn2r60 UTSW 7 41,786,251 (GRCm39) nonsense probably null
R2847:Vmn2r60 UTSW 7 41,785,857 (GRCm39) missense probably benign 0.07
R2885:Vmn2r60 UTSW 7 41,790,403 (GRCm39) missense possibly damaging 0.91
R2894:Vmn2r60 UTSW 7 41,785,220 (GRCm39) missense probably benign
R2921:Vmn2r60 UTSW 7 41,790,459 (GRCm39) missense probably damaging 0.98
R2922:Vmn2r60 UTSW 7 41,790,459 (GRCm39) missense probably damaging 0.98
R3772:Vmn2r60 UTSW 7 41,765,980 (GRCm39) missense probably benign 0.35
R3820:Vmn2r60 UTSW 7 41,785,125 (GRCm39) missense probably damaging 0.98
R3822:Vmn2r60 UTSW 7 41,785,125 (GRCm39) missense probably damaging 0.98
R3872:Vmn2r60 UTSW 7 41,785,878 (GRCm39) missense probably benign 0.19
R4222:Vmn2r60 UTSW 7 41,765,952 (GRCm39) missense probably benign 0.08
R4223:Vmn2r60 UTSW 7 41,765,952 (GRCm39) missense probably benign 0.08
R4224:Vmn2r60 UTSW 7 41,765,952 (GRCm39) missense probably benign 0.08
R4526:Vmn2r60 UTSW 7 41,844,667 (GRCm39) missense probably damaging 0.96
R4547:Vmn2r60 UTSW 7 41,785,087 (GRCm39) missense probably null 0.54
R4840:Vmn2r60 UTSW 7 41,785,285 (GRCm39) missense probably damaging 1.00
R5173:Vmn2r60 UTSW 7 41,844,935 (GRCm39) missense probably damaging 0.97
R5231:Vmn2r60 UTSW 7 41,786,448 (GRCm39) missense possibly damaging 0.93
R5480:Vmn2r60 UTSW 7 41,785,154 (GRCm39) missense probably damaging 0.98
R5521:Vmn2r60 UTSW 7 41,845,049 (GRCm39) missense probably damaging 0.99
R5834:Vmn2r60 UTSW 7 41,765,932 (GRCm39) missense probably benign 0.17
R6038:Vmn2r60 UTSW 7 41,844,386 (GRCm39) missense probably benign 0.04
R6038:Vmn2r60 UTSW 7 41,844,386 (GRCm39) missense probably benign 0.04
R6112:Vmn2r60 UTSW 7 41,844,847 (GRCm39) missense probably damaging 1.00
R6149:Vmn2r60 UTSW 7 41,786,400 (GRCm39) missense probably damaging 1.00
R6170:Vmn2r60 UTSW 7 41,785,045 (GRCm39) missense possibly damaging 0.94
R6383:Vmn2r60 UTSW 7 41,765,895 (GRCm39) start codon destroyed probably null 0.04
R6811:Vmn2r60 UTSW 7 41,844,310 (GRCm39) missense probably damaging 1.00
R6876:Vmn2r60 UTSW 7 41,785,087 (GRCm39) missense probably null 0.54
R6997:Vmn2r60 UTSW 7 41,791,716 (GRCm39) missense probably benign 0.00
R7040:Vmn2r60 UTSW 7 41,791,666 (GRCm39) missense probably benign 0.00
R7116:Vmn2r60 UTSW 7 41,786,487 (GRCm39) missense probably benign 0.00
R7128:Vmn2r60 UTSW 7 41,844,536 (GRCm39) missense probably damaging 0.96
R7232:Vmn2r60 UTSW 7 41,786,166 (GRCm39) missense possibly damaging 0.83
R7296:Vmn2r60 UTSW 7 41,785,826 (GRCm39) missense probably benign 0.01
R7376:Vmn2r60 UTSW 7 41,844,631 (GRCm39) missense probably damaging 1.00
R7526:Vmn2r60 UTSW 7 41,845,158 (GRCm39) frame shift probably null
R7527:Vmn2r60 UTSW 7 41,845,158 (GRCm39) frame shift probably null
R7528:Vmn2r60 UTSW 7 41,845,158 (GRCm39) frame shift probably null
R7764:Vmn2r60 UTSW 7 41,844,535 (GRCm39) missense probably damaging 0.99
R7843:Vmn2r60 UTSW 7 41,844,511 (GRCm39) missense probably benign 0.00
R8080:Vmn2r60 UTSW 7 41,790,521 (GRCm39) missense probably benign 0.30
R8290:Vmn2r60 UTSW 7 41,791,690 (GRCm39) missense probably damaging 1.00
R8342:Vmn2r60 UTSW 7 41,790,494 (GRCm39) missense possibly damaging 0.63
R8362:Vmn2r60 UTSW 7 41,844,954 (GRCm39) missense probably damaging 1.00
R8418:Vmn2r60 UTSW 7 41,844,850 (GRCm39) missense probably damaging 0.97
R8848:Vmn2r60 UTSW 7 41,786,169 (GRCm39) missense probably damaging 1.00
R8860:Vmn2r60 UTSW 7 41,791,654 (GRCm39) missense probably damaging 0.99
R8882:Vmn2r60 UTSW 7 41,790,518 (GRCm39) missense probably benign 0.00
R8913:Vmn2r60 UTSW 7 41,785,778 (GRCm39) missense probably benign 0.27
R9190:Vmn2r60 UTSW 7 41,844,935 (GRCm39) missense probably damaging 0.99
R9229:Vmn2r60 UTSW 7 41,791,723 (GRCm39) missense possibly damaging 0.95
R9295:Vmn2r60 UTSW 7 41,785,955 (GRCm39) missense probably benign 0.01
R9335:Vmn2r60 UTSW 7 41,844,332 (GRCm39) missense probably damaging 1.00
R9796:Vmn2r60 UTSW 7 41,785,172 (GRCm39) missense probably benign
RF024:Vmn2r60 UTSW 7 41,790,363 (GRCm39) missense probably benign 0.01
X0023:Vmn2r60 UTSW 7 41,790,538 (GRCm39) missense probably benign 0.01
Posted On 2015-04-16