Incidental Mutation 'IGL01622:Dpy19l3'
ID 278631
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Dpy19l3
Ensembl Gene ENSMUSG00000043671
Gene Name dpy-19 like C-mannosyltransferase 3
Synonyms 9330164H19Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.130) question?
Stock # IGL01622
Quality Score
Status
Chromosome 7
Chromosomal Location 35384925-35453879 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to A at 35422169 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Isoleucine at position 228 (T228I)
Ref Sequence ENSEMBL: ENSMUSP00000054747 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000051377] [ENSMUST00000144416]
AlphaFold Q71B07
Predicted Effect probably damaging
Transcript: ENSMUST00000051377
AA Change: T228I

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000054747
Gene: ENSMUSG00000043671
AA Change: T228I

DomainStartEndE-ValueType
Pfam:Dpy19 55 712 2.2e-243 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000127782
Predicted Effect probably benign
Transcript: ENSMUST00000144416
SMART Domains Protein: ENSMUSP00000122489
Gene: ENSMUSG00000043671

DomainStartEndE-ValueType
Pfam:Dpy19 1 114 2.5e-50 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000155451
Predicted Effect noncoding transcript
Transcript: ENSMUST00000205751
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 54 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930596D02Rik G A 14: 35,532,024 (GRCm39) Q184* probably null Het
A1bg A C 15: 60,789,742 (GRCm39) I502S possibly damaging Het
Actl11 T C 9: 107,805,775 (GRCm39) S33P probably benign Het
Aftph G T 11: 20,659,632 (GRCm39) D730E probably damaging Het
Arhgap29 A G 3: 121,767,773 (GRCm39) probably benign Het
Brf1 T G 12: 112,924,795 (GRCm39) E643A probably benign Het
Caskin1 G T 17: 24,722,914 (GRCm39) probably null Het
Ccnjl T C 11: 43,476,154 (GRCm39) V259A probably benign Het
Ccser2 G T 14: 36,662,920 (GRCm39) T88K probably benign Het
Cdk17 T C 10: 93,074,824 (GRCm39) probably benign Het
Clec16a G A 16: 10,395,774 (GRCm39) S309N possibly damaging Het
Cpxm1 C A 2: 130,233,191 (GRCm39) A633S probably benign Het
Ctnnbl1 A T 2: 157,661,468 (GRCm39) N326I probably damaging Het
Cyp46a1 T C 12: 108,318,234 (GRCm39) V215A possibly damaging Het
Daxx A G 17: 34,132,454 (GRCm39) D528G probably benign Het
Dnah6 T C 6: 73,121,701 (GRCm39) Y1427C probably damaging Het
Fam131c C T 4: 141,109,761 (GRCm39) A131V possibly damaging Het
Fat1 A G 8: 45,482,592 (GRCm39) T3061A possibly damaging Het
Fgl2 T A 5: 21,578,175 (GRCm39) L154H possibly damaging Het
Fhod3 T A 18: 25,155,924 (GRCm39) I514K probably benign Het
Ficd G A 5: 113,876,622 (GRCm39) G266S probably damaging Het
Frem3 A G 8: 81,340,544 (GRCm39) T946A probably benign Het
Gan T A 8: 117,913,917 (GRCm39) V105D probably damaging Het
Garin5b A G 7: 4,761,722 (GRCm39) V330A probably benign Het
Gramd1c A G 16: 43,811,061 (GRCm39) V221A probably damaging Het
Hacd1 A G 2: 14,040,667 (GRCm39) V196A probably benign Het
Kcna6 C A 6: 126,715,576 (GRCm39) V438L probably damaging Het
Kif14 T C 1: 136,425,094 (GRCm39) probably benign Het
Klhl41 T C 2: 69,508,582 (GRCm39) V512A probably benign Het
Lrfn1 A G 7: 28,166,111 (GRCm39) T502A probably damaging Het
Notch3 A T 17: 32,377,844 (GRCm39) F105I possibly damaging Het
Or4b13 T G 2: 90,082,953 (GRCm39) K126N probably damaging Het
Or5m10 A T 2: 85,717,306 (GRCm39) H54L probably benign Het
P3h1 C T 4: 119,092,480 (GRCm39) T171I probably damaging Het
Pcdhb1 A G 18: 37,399,366 (GRCm39) E439G possibly damaging Het
Pik3c3 A T 18: 30,423,578 (GRCm39) K225* probably null Het
Pik3c3 A G 18: 30,426,102 (GRCm39) probably benign Het
Pik3r5 T A 11: 68,377,452 (GRCm39) probably null Het
Pnpt1 A C 11: 29,098,272 (GRCm39) probably benign Het
Ppp2r1b T A 9: 50,789,422 (GRCm39) V495D probably damaging Het
Rbfox3 C A 11: 118,396,440 (GRCm39) probably benign Het
Sec14l2 G A 11: 4,053,966 (GRCm39) P234S possibly damaging Het
Sec16a A C 2: 26,328,915 (GRCm39) D1033E probably benign Het
Septin14 A G 5: 129,763,019 (GRCm39) V357A probably damaging Het
Sf3a3 C T 4: 124,612,136 (GRCm39) T131I possibly damaging Het
Snrpa A T 7: 26,892,395 (GRCm39) M55K probably benign Het
Swt1 G T 1: 151,286,760 (GRCm39) T244N probably benign Het
Tbl1xr1 A G 3: 22,246,238 (GRCm39) T253A probably benign Het
Tst G T 15: 78,283,964 (GRCm39) R288S probably benign Het
Vmn2r60 A G 7: 41,785,910 (GRCm39) I238V probably benign Het
Zbtb14 A G 17: 69,695,184 (GRCm39) K294R probably benign Het
Zfp710 T A 7: 79,730,871 (GRCm39) V16E probably damaging Het
Zfpm2 A G 15: 40,965,320 (GRCm39) T602A probably benign Het
Zfr2 G A 10: 81,087,193 (GRCm39) M850I probably benign Het
Other mutations in Dpy19l3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01066:Dpy19l3 APN 7 35,392,192 (GRCm39) splice site probably benign
IGL01351:Dpy19l3 APN 7 35,426,840 (GRCm39) splice site probably benign
IGL01623:Dpy19l3 APN 7 35,422,169 (GRCm39) missense probably damaging 1.00
IGL01645:Dpy19l3 APN 7 35,394,763 (GRCm39) missense probably benign 0.00
IGL02725:Dpy19l3 APN 7 35,411,343 (GRCm39) missense probably benign 0.01
IGL02817:Dpy19l3 APN 7 35,392,233 (GRCm39) missense probably damaging 1.00
IGL03130:Dpy19l3 APN 7 35,452,097 (GRCm39) missense probably benign 0.00
IGL03178:Dpy19l3 APN 7 35,429,154 (GRCm39) nonsense probably null
IGL03374:Dpy19l3 APN 7 35,411,633 (GRCm39) missense possibly damaging 0.82
R0143:Dpy19l3 UTSW 7 35,413,640 (GRCm39) missense probably benign 0.19
R0164:Dpy19l3 UTSW 7 35,416,071 (GRCm39) missense probably damaging 0.98
R0164:Dpy19l3 UTSW 7 35,416,071 (GRCm39) missense probably damaging 0.98
R0385:Dpy19l3 UTSW 7 35,452,130 (GRCm39) missense probably damaging 0.97
R0705:Dpy19l3 UTSW 7 35,394,741 (GRCm39) missense probably damaging 0.96
R1489:Dpy19l3 UTSW 7 35,424,835 (GRCm39) nonsense probably null
R1640:Dpy19l3 UTSW 7 35,449,203 (GRCm39) missense probably benign 0.41
R1782:Dpy19l3 UTSW 7 35,407,580 (GRCm39) missense possibly damaging 0.94
R1843:Dpy19l3 UTSW 7 35,429,185 (GRCm39) missense probably damaging 1.00
R2096:Dpy19l3 UTSW 7 35,426,713 (GRCm39) critical splice donor site probably null
R3814:Dpy19l3 UTSW 7 35,426,717 (GRCm39) nonsense probably null
R4438:Dpy19l3 UTSW 7 35,392,284 (GRCm39) missense probably damaging 1.00
R4537:Dpy19l3 UTSW 7 35,411,326 (GRCm39) missense probably benign 0.01
R4735:Dpy19l3 UTSW 7 35,422,146 (GRCm39) missense probably benign 0.00
R4737:Dpy19l3 UTSW 7 35,402,926 (GRCm39) missense probably damaging 1.00
R4864:Dpy19l3 UTSW 7 35,411,607 (GRCm39) nonsense probably null
R4915:Dpy19l3 UTSW 7 35,452,167 (GRCm39) utr 5 prime probably benign
R4920:Dpy19l3 UTSW 7 35,407,467 (GRCm39) intron probably benign
R5300:Dpy19l3 UTSW 7 35,426,735 (GRCm39) missense probably damaging 1.00
R5527:Dpy19l3 UTSW 7 35,413,555 (GRCm39) missense possibly damaging 0.95
R5801:Dpy19l3 UTSW 7 35,424,723 (GRCm39) missense probably benign 0.10
R6815:Dpy19l3 UTSW 7 35,449,272 (GRCm39) missense possibly damaging 0.67
R7150:Dpy19l3 UTSW 7 35,408,055 (GRCm39) missense probably benign
R7198:Dpy19l3 UTSW 7 35,449,190 (GRCm39) missense possibly damaging 0.73
R7378:Dpy19l3 UTSW 7 35,452,067 (GRCm39) missense probably benign 0.10
R7625:Dpy19l3 UTSW 7 35,452,106 (GRCm39) missense probably benign
R7641:Dpy19l3 UTSW 7 35,394,734 (GRCm39) missense probably damaging 1.00
R7674:Dpy19l3 UTSW 7 35,394,734 (GRCm39) missense probably damaging 1.00
R8034:Dpy19l3 UTSW 7 35,449,281 (GRCm39) missense probably benign
R8073:Dpy19l3 UTSW 7 35,429,173 (GRCm39) missense probably damaging 1.00
R8183:Dpy19l3 UTSW 7 35,394,814 (GRCm39) missense probably damaging 0.96
R8206:Dpy19l3 UTSW 7 35,429,155 (GRCm39) missense probably damaging 1.00
R9299:Dpy19l3 UTSW 7 35,424,752 (GRCm39) nonsense probably null
R9765:Dpy19l3 UTSW 7 35,408,056 (GRCm39) missense probably benign
Posted On 2015-04-16