Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01770:Vmn2r98'

278882

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Vmn2r98

Ensembl Gene

ENSMUSG00000096717

Gene Name

vomeronasal 2, receptor 98

Synonyms

EG224552

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.141) question?

Stock #

IGL01770

Quality Score

Status

Chromosome

Chromosomal Location

19053460-19082411 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 19066440 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 400 (Y400C)

Ref Sequence

ENSEMBL: ENSMUSP00000131261 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000170424]

AlphaFold

E9PZ56

Predicted Effect

probably damaging
Transcript: ENSMUST00000170424
AA Change: Y400C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000131261
Gene: ENSMUSG00000096717
AA Change: Y400C

Domain	Start	End	E-Value	Type
signal peptide	1	19	N/A	INTRINSIC
Pfam:ANF_receptor	82	460	2.6e-35	PFAM
Pfam:NCD3G	509	562	7.4e-22	PFAM
Pfam:7tm_3	594	830	1.4e-52	PFAM
low complexity region	844	856	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 12 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adss2	T	C	1: 177,776,509 (GRCm38)	S177G	possibly damaging	Het
Fbxw2	G	A	2: 34,811,026 (GRCm38)	T194I	possibly damaging	Het
Il16	A	T	7: 83,673,026 (GRCm38)		probably benign	Het
Klra5	A	T	6: 129,906,664 (GRCm38)	C77S	probably damaging	Het
Mterf4	G	A	1: 93,304,994 (GRCm38)	T45I	probably damaging	Het
Or1j17	G	A	2: 36,688,105 (GRCm38)	M34I	probably benign	Het
Pcdhb2	T	G	18: 37,296,303 (GRCm38)	V86G	probably damaging	Het
Pkd1l3	A	G	8: 109,648,502 (GRCm38)		probably null	Het
Prrc2c	A	T	1: 162,704,499 (GRCm38)	S1516T	probably benign	Het
Shisa3	G	A	5: 67,611,065 (GRCm38)	G103S	probably damaging	Het
St3gal4	A	C	9: 35,052,305 (GRCm38)	F236V	possibly damaging	Het
Vmn1r57	A	G	7: 5,220,668 (GRCm38)	D64G	possibly damaging	Het

Other mutations in Vmn2r98

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00897:Vmn2r98	APN	17	19,065,745 (GRCm38)	splice site	probably benign
IGL01296:Vmn2r98	APN	17	19,065,185 (GRCm38)	missense	probably damaging	1.00
IGL01363:Vmn2r98	APN	17	19,065,758 (GRCm38)	missense	probably benign	0.01
IGL01618:Vmn2r98	APN	17	19,065,259 (GRCm38)	missense	possibly damaging	0.93
IGL01746:Vmn2r98	APN	17	19,066,451 (GRCm38)	missense	probably damaging	1.00
IGL01747:Vmn2r98	APN	17	19,066,440 (GRCm38)	missense	probably damaging	1.00
IGL01868:Vmn2r98	APN	17	19,066,286 (GRCm38)	missense	probably benign
IGL02123:Vmn2r98	APN	17	19,080,679 (GRCm38)	missense	probably damaging	1.00
IGL02323:Vmn2r98	APN	17	19,065,851 (GRCm38)	missense	probably damaging	0.99
IGL02543:Vmn2r98	APN	17	19,065,821 (GRCm38)	missense	probably benign
IGL02650:Vmn2r98	APN	17	19,080,961 (GRCm38)	missense	probably benign	0.00
IGL02676:Vmn2r98	APN	17	19,065,259 (GRCm38)	missense	probably benign	0.00
IGL02803:Vmn2r98	APN	17	19,066,013 (GRCm38)	missense	probably benign
IGL02807:Vmn2r98	APN	17	19,081,021 (GRCm38)	missense	probably damaging	1.00
IGL03307:Vmn2r98	APN	17	19,065,980 (GRCm38)	missense	possibly damaging	0.62
IGL03396:Vmn2r98	APN	17	19,069,845 (GRCm38)	missense	possibly damaging	0.92
PIT4131001:Vmn2r98	UTSW	17	19,080,961 (GRCm38)	missense	probably benign	0.00
R0122:Vmn2r98	UTSW	17	19,066,400 (GRCm38)	missense	probably benign	0.06
R0329:Vmn2r98	UTSW	17	19,066,347 (GRCm38)	missense	probably benign	0.21
R0330:Vmn2r98	UTSW	17	19,066,347 (GRCm38)	missense	probably benign	0.21
R0368:Vmn2r98	UTSW	17	19,065,827 (GRCm38)	nonsense	probably null
R0545:Vmn2r98	UTSW	17	19,053,613 (GRCm38)	missense	probably benign	0.15
R0635:Vmn2r98	UTSW	17	19,080,497 (GRCm38)	missense	probably benign	0.00
R0689:Vmn2r98	UTSW	17	19,080,520 (GRCm38)	missense	possibly damaging	0.83
R1035:Vmn2r98	UTSW	17	19,080,749 (GRCm38)	missense	possibly damaging	0.90
R1243:Vmn2r98	UTSW	17	19,065,948 (GRCm38)	missense	possibly damaging	0.52
R1421:Vmn2r98	UTSW	17	19,065,178 (GRCm38)	missense	probably damaging	1.00
R1629:Vmn2r98	UTSW	17	19,067,383 (GRCm38)	missense	possibly damaging	0.94
R1643:Vmn2r98	UTSW	17	19,080,908 (GRCm38)	missense	probably damaging	1.00
R1795:Vmn2r98	UTSW	17	19,066,440 (GRCm38)	missense	probably damaging	1.00
R1958:Vmn2r98	UTSW	17	19,066,418 (GRCm38)	missense	possibly damaging	0.70
R1962:Vmn2r98	UTSW	17	19,065,333 (GRCm38)	nonsense	probably null
R2165:Vmn2r98	UTSW	17	19,081,291 (GRCm38)	missense	unknown
R2238:Vmn2r98	UTSW	17	19,065,951 (GRCm38)	missense	probably damaging	1.00
R2252:Vmn2r98	UTSW	17	19,080,436 (GRCm38)	missense	probably benign	0.00
R2323:Vmn2r98	UTSW	17	19,065,819 (GRCm38)	missense	probably benign	0.18
R2887:Vmn2r98	UTSW	17	19,081,177 (GRCm38)	missense	possibly damaging	0.83
R2909:Vmn2r98	UTSW	17	19,067,402 (GRCm38)	missense	probably damaging	1.00
R3001:Vmn2r98	UTSW	17	19,065,863 (GRCm38)	missense	probably benign	0.01
R3002:Vmn2r98	UTSW	17	19,065,863 (GRCm38)	missense	probably benign	0.01
R3003:Vmn2r98	UTSW	17	19,065,863 (GRCm38)	missense	probably benign	0.01
R3788:Vmn2r98	UTSW	17	19,080,625 (GRCm38)	missense	probably benign	0.31
R4570:Vmn2r98	UTSW	17	19,066,092 (GRCm38)	missense	probably benign	0.11
R4706:Vmn2r98	UTSW	17	19,069,745 (GRCm38)	missense	probably damaging	1.00
R4723:Vmn2r98	UTSW	17	19,066,340 (GRCm38)	missense	probably benign	0.01
R5036:Vmn2r98	UTSW	17	19,066,157 (GRCm38)	missense	probably benign	0.00
R5072:Vmn2r98	UTSW	17	19,066,044 (GRCm38)	missense	probably benign	0.07
R5121:Vmn2r98	UTSW	17	19,053,553 (GRCm38)	missense	probably benign	0.13
R5283:Vmn2r98	UTSW	17	19,080,719 (GRCm38)	missense	probably benign	0.05
R5294:Vmn2r98	UTSW	17	19,069,754 (GRCm38)	nonsense	probably null
R5371:Vmn2r98	UTSW	17	19,069,753 (GRCm38)	missense	probably damaging	1.00
R5532:Vmn2r98	UTSW	17	19,067,383 (GRCm38)	missense	possibly damaging	0.94
R5598:Vmn2r98	UTSW	17	19,080,899 (GRCm38)	missense	probably benign	0.37
R5800:Vmn2r98	UTSW	17	19,065,998 (GRCm38)	missense	probably benign	0.17
R6089:Vmn2r98	UTSW	17	19,066,074 (GRCm38)	missense	probably benign	0.29
R6155:Vmn2r98	UTSW	17	19,065,881 (GRCm38)	missense	possibly damaging	0.87
R6853:Vmn2r98	UTSW	17	19,065,801 (GRCm38)	missense	probably benign	0.00
R6920:Vmn2r98	UTSW	17	19,065,248 (GRCm38)	missense	probably damaging	0.98
R7012:Vmn2r98	UTSW	17	19,066,268 (GRCm38)	missense	probably benign	0.06
R7042:Vmn2r98	UTSW	17	19,080,922 (GRCm38)	missense	probably benign
R7068:Vmn2r98	UTSW	17	19,065,313 (GRCm38)	missense	probably benign
R7607:Vmn2r98	UTSW	17	19,067,308 (GRCm38)	missense	possibly damaging	0.95
R7763:Vmn2r98	UTSW	17	19,080,535 (GRCm38)	missense	probably benign	0.00
R7771:Vmn2r98	UTSW	17	19,067,198 (GRCm38)	splice site	probably null
R7915:Vmn2r98	UTSW	17	19,067,231 (GRCm38)	missense	probably benign	0.10
R8028:Vmn2r98	UTSW	17	19,053,650 (GRCm38)	missense	probably benign	0.00
R8205:Vmn2r98	UTSW	17	19,081,163 (GRCm38)	missense	probably damaging	0.99
R8241:Vmn2r98	UTSW	17	19,080,769 (GRCm38)	missense	probably damaging	0.99
R8906:Vmn2r98	UTSW	17	19,066,270 (GRCm38)	missense	probably benign
R8952:Vmn2r98	UTSW	17	19,065,269 (GRCm38)	missense	possibly damaging	0.76
R9147:Vmn2r98	UTSW	17	19,066,121 (GRCm38)	missense	probably benign	0.04
R9148:Vmn2r98	UTSW	17	19,066,121 (GRCm38)	missense	probably benign	0.04
R9187:Vmn2r98	UTSW	17	19,081,219 (GRCm38)	missense	probably damaging	1.00
R9344:Vmn2r98	UTSW	17	19,066,515 (GRCm38)	missense	probably benign	0.14
R9467:Vmn2r98	UTSW	17	19,067,255 (GRCm38)	missense	probably benign	0.01
R9487:Vmn2r98	UTSW	17	19,081,234 (GRCm38)	missense	possibly damaging	0.78
R9753:Vmn2r98	UTSW	17	19,065,403 (GRCm38)	missense	probably benign	0.27
Z1177:Vmn2r98	UTSW	17	19,067,423 (GRCm38)	nonsense	probably null
Z1177:Vmn2r98	UTSW	17	19,065,136 (GRCm38)	critical splice acceptor site	probably null

Posted On

2015-04-16