Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02104:Rngtt'

279911

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Rngtt

Ensembl Gene

ENSMUSG00000028274

Gene Name

RNA guanylyltransferase and 5'-phosphatase

Synonyms

mouse capping enzyme

Accession Numbers

Is this an essential gene?

Probably essential (E-score: 0.971) question?

Stock #

IGL02104

Quality Score

Status

Chromosome

Chromosomal Location

33310311-33502614 bp(+) (GRCm38)

Type of Mutation

critical splice acceptor site

DNA Base Change (assembly)

A to G at 33320517 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000103788 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000029942] [ENSMUST00000108153]

AlphaFold

O55236

PDB Structure

CRYSTAL STRUCTURE OF THE RNA TRIPHOSPHATASE DOMAIN OF MOUSE MRNA CAPPING ENZYME [X-RAY DIFFRACTION]
CRYSTAL STRUCTURE OF THE OXIDIZED RNA TRIPHOSPHATASE DOMAIN OF MOUSE MRNA CAPPING ENZYME [X-RAY DIFFRACTION]
Crystal structure of mammalian capping enzyme (Mce1) and Pol II CTD complex [X-RAY DIFFRACTION]

Predicted Effect

probably null
Transcript: ENSMUST00000029942

SMART Domains

Protein: ENSMUSP00000029942
Gene: ENSMUSG00000028274

Domain	Start	End	E-Value	Type
Pfam:DSPc	46	179	4.7e-12	PFAM
low complexity region	195	205	N/A	INTRINSIC
Pfam:mRNA_cap_enzyme	272	460	1.8e-73	PFAM
Pfam:mRNA_cap_C	463	550	3.7e-28	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000108153

SMART Domains

Protein: ENSMUSP00000103788
Gene: ENSMUSG00000028274

Domain	Start	End	E-Value	Type
Pfam:DSPc	47	179	2.2e-13	PFAM
low complexity region	195	205	N/A	INTRINSIC
Pfam:mRNA_cap_enzyme	272	460	2e-80	PFAM
Pfam:mRNA_cap_C	464	559	1.9e-22	PFAM
low complexity region	577	590	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000130138

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000155397

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 52 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4933440M02Rik	T	C	7: 125,331,542		noncoding transcript	Het
Abcb5	T	A	12: 118,940,680	Q125L	probably damaging	Het
Acap3	G	A	4: 155,905,085	R662H	probably damaging	Het
Aox4	T	A	1: 58,236,657		probably benign	Het
Aqp6	T	C	15: 99,604,278	S285P	probably benign	Het
Arhgef5	A	T	6: 43,272,411	Q32L	probably damaging	Het
B3gnt6	G	T	7: 98,194,101	D217E	probably damaging	Het
Chd6	T	C	2: 160,977,512	I1338V	probably benign	Het
Clic6	A	G	16: 92,498,479	E9G	possibly damaging	Het
Col11a1	T	A	3: 114,181,397		probably null	Het
Dcdc2b	T	A	4: 129,611,074	D88V	probably benign	Het
Dis3l	T	A	9: 64,310,329	K791N	possibly damaging	Het
Dmxl2	A	T	9: 54,404,015	Y1008*	probably null	Het
Dnah11	A	G	12: 118,192,390	V175A	probably benign	Het
Efl1	A	G	7: 82,658,055		probably null	Het
Fam117b	C	T	1: 59,949,119	T219I	probably benign	Het
Fgf21	T	A	7: 45,615,224	Q28L	probably benign	Het
Folh1	T	C	7: 86,744,430	Q391R	possibly damaging	Het
Gars	A	G	6: 55,077,697	D663G	probably damaging	Het
Lats2	A	G	14: 57,734,012	F69L	probably damaging	Het
Lrp2	C	T	2: 69,510,418	V1038M	probably damaging	Het
Map3k1	A	T	13: 111,756,243	V826E	probably damaging	Het
Mapkap1	T	A	2: 34,623,470	Y497*	probably null	Het
Mast3	T	C	8: 70,787,906	I296V	possibly damaging	Het
Mon1a	T	G	9: 107,901,615	L346R	probably damaging	Het
Mphosph8	T	C	14: 56,674,579	L353S	probably benign	Het
Muc5ac	T	C	7: 141,811,078	Y2634H	probably damaging	Het
Mylk	A	G	16: 34,815,435	T9A	probably benign	Het
Olfr1031	G	T	2: 85,992,386	D190Y	probably damaging	Het
Olfr1440	T	A	19: 12,394,899	V212D	probably damaging	Het
Olfr1484	T	A	19: 13,585,604	M57K	probably damaging	Het
Olfr418	T	C	1: 173,271,036	V287A	probably damaging	Het
Olfr543	C	A	7: 102,477,337	V178F	probably damaging	Het
Olfr761	A	C	17: 37,952,291	H244Q	probably damaging	Het
Olfr843	A	T	9: 19,248,870	H176Q	probably benign	Het
Pabpc2	A	C	18: 39,774,883	Q400H	possibly damaging	Het
Pigg	A	G	5: 108,342,097	Y856C	probably damaging	Het
Plekhn1	A	T	4: 156,222,408	V508E	probably benign	Het
Pom121l2	C	A	13: 21,982,275	H239N	possibly damaging	Het
Prdm2	A	G	4: 143,133,427	S1098P	probably benign	Het
Rnf212	A	G	5: 108,747,440	I41T	possibly damaging	Het
Rpn2	C	T	2: 157,321,827	T613M	probably damaging	Het
Scd4	G	T	19: 44,344,747	V304F	possibly damaging	Het
Sez6l	A	G	5: 112,426,764		probably benign	Het
Shroom3	A	G	5: 92,940,389	R158G	probably benign	Het
Stil	T	C	4: 115,041,482	L1103P	probably damaging	Het
Tanc2	T	C	11: 105,780,133		probably benign	Het
Tmc1	C	T	19: 20,832,454	D255N	probably benign	Het
Trank1	C	A	9: 111,390,712	D2172E	possibly damaging	Het
Tyro3	G	A	2: 119,813,200	R718H	probably damaging	Het
Vamp2	C	A	11: 69,090,657	F114L	probably benign	Het
Wdr66	T	A	5: 123,302,698	L1106*	probably null	Het

Other mutations in Rngtt

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01865:Rngtt	APN	4	33325157	splice site	probably benign
IGL01945:Rngtt	APN	4	33339073	missense	probably damaging	1.00
IGL02505:Rngtt	APN	4	33337936	missense	possibly damaging	0.75
IGL02679:Rngtt	APN	4	33356098	missense	possibly damaging	0.65
IGL03309:Rngtt	APN	4	33339091	missense	probably damaging	1.00
R0013:Rngtt	UTSW	4	33379409	missense	probably benign	0.01
R0626:Rngtt	UTSW	4	33329598	splice site	probably null
R0633:Rngtt	UTSW	4	33368690	missense	probably damaging	1.00
R1645:Rngtt	UTSW	4	33362939	missense	probably damaging	1.00
R1670:Rngtt	UTSW	4	33368660	missense	probably benign
R1700:Rngtt	UTSW	4	33330864	missense	probably damaging	1.00
R1754:Rngtt	UTSW	4	33329634	splice site	probably null
R1809:Rngtt	UTSW	4	33443614	missense	probably benign	0.04
R1929:Rngtt	UTSW	4	33500302	nonsense	probably null
R2271:Rngtt	UTSW	4	33500302	nonsense	probably null
R2844:Rngtt	UTSW	4	33368678	missense	probably benign
R3773:Rngtt	UTSW	4	33330889	missense	probably damaging	1.00
R4445:Rngtt	UTSW	4	33499035	missense	probably benign
R4449:Rngtt	UTSW	4	33330865	missense	probably damaging	1.00
R4510:Rngtt	UTSW	4	33339032	missense	possibly damaging	0.88
R4511:Rngtt	UTSW	4	33339032	missense	possibly damaging	0.88
R4578:Rngtt	UTSW	4	33339050	missense	probably benign	0.30
R4610:Rngtt	UTSW	4	33339133	intron	probably benign
R4712:Rngtt	UTSW	4	33379394	missense	probably benign	0.00
R4888:Rngtt	UTSW	4	33500335	missense	unknown
R4911:Rngtt	UTSW	4	33500292	splice site	probably null
R5248:Rngtt	UTSW	4	33325110	nonsense	probably null
R6429:Rngtt	UTSW	4	33320606	nonsense	probably null
R6571:Rngtt	UTSW	4	33379413	missense	probably damaging	1.00
R7260:Rngtt	UTSW	4	33356176	missense	possibly damaging	0.52
R7298:Rngtt	UTSW	4	33362927	missense	probably damaging	1.00
R7379:Rngtt	UTSW	4	33498981	nonsense	probably null
R8163:Rngtt	UTSW	4	33325109	missense	probably damaging	1.00
R8717:Rngtt	UTSW	4	33368695	missense	probably damaging	1.00
R9136:Rngtt	UTSW	4	33404218	missense	probably damaging	1.00
R9324:Rngtt	UTSW	4	33320613	nonsense	probably null
R9749:Rngtt	UTSW	4	33368618	missense	possibly damaging	0.71

Posted On

2015-04-16