Incidental Mutation 'IGL02114:Or13c3'
| ID |
280283 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or13c3
|
| Ensembl Gene |
ENSMUSG00000049648 |
| Gene Name |
olfactory receptor family 13 subfamily C member 3 |
| Synonyms |
Olfr273, GA_x6K02T2N78B-7137430-7138383, MOR262-8 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.060)
|
| Stock # |
IGL02114
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
4 |
| Chromosomal Location |
52855558-52856511 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 52856144 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Phenylalanine
at position 123
(Y123F)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000103297
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000051520]
[ENSMUST00000107670]
[ENSMUST00000215274]
|
| AlphaFold |
Q8VG87 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000051520
AA Change: Y123F
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000052080
Gene: ENSMUSG00000049648
AA Change: Y123F
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
314 |
1.3e-55 |
PFAM |
|
Pfam:7tm_1
|
41 |
296 |
1.4e-28 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000107670
AA Change: Y123F
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000103297
Gene: ENSMUSG00000049648
AA Change: Y123F
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_1
|
41 |
296 |
3.2e-37 |
PFAM |
|
Pfam:7tm_4
|
139 |
289 |
4e-42 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000215274
AA Change: Y123F
PolyPhen 2
Score 0.415 (Sensitivity: 0.89; Specificity: 0.90)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 40 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1700084J12Rik |
C |
A |
15: 33,405,844 (GRCm39) |
|
probably benign |
Het |
| Akap3 |
T |
C |
6: 126,842,959 (GRCm39) |
V526A |
probably damaging |
Het |
| Ano6 |
C |
A |
15: 95,841,341 (GRCm39) |
S479R |
probably damaging |
Het |
| Aqp8 |
C |
A |
7: 123,063,419 (GRCm39) |
H90N |
probably damaging |
Het |
| Arih1 |
A |
T |
9: 59,333,452 (GRCm39) |
C229S |
probably damaging |
Het |
| Col6a6 |
C |
A |
9: 105,644,398 (GRCm39) |
|
probably null |
Het |
| Cp |
A |
G |
3: 20,020,511 (GRCm39) |
E168G |
probably benign |
Het |
| Creb5 |
C |
T |
6: 53,581,443 (GRCm39) |
|
probably benign |
Het |
| Cstdc3 |
T |
A |
16: 36,131,617 (GRCm39) |
Y42* |
probably null |
Het |
| Cyp2c66 |
C |
A |
19: 39,159,519 (GRCm39) |
|
probably benign |
Het |
| Dcpp2 |
C |
A |
17: 24,119,609 (GRCm39) |
A141D |
possibly damaging |
Het |
| Dnah5 |
A |
G |
15: 28,397,270 (GRCm39) |
D3321G |
probably damaging |
Het |
| Ecsit |
T |
C |
9: 21,989,440 (GRCm39) |
|
probably benign |
Het |
| Gabra1 |
T |
C |
11: 42,026,402 (GRCm39) |
I297V |
probably damaging |
Het |
| Gja8 |
T |
C |
3: 96,827,341 (GRCm39) |
K107R |
probably benign |
Het |
| Gm16686 |
A |
T |
4: 88,673,739 (GRCm39) |
L30Q |
probably null |
Het |
| Hbp1 |
T |
C |
12: 31,980,674 (GRCm39) |
|
probably benign |
Het |
| Inhbc |
T |
C |
10: 127,205,971 (GRCm39) |
I99V |
probably benign |
Het |
| Kcne3 |
T |
A |
7: 99,833,697 (GRCm39) |
|
probably benign |
Het |
| Larp1 |
T |
C |
11: 57,947,881 (GRCm39) |
Y926H |
probably damaging |
Het |
| Lhfpl5 |
G |
T |
17: 28,795,149 (GRCm39) |
A59S |
possibly damaging |
Het |
| Mov10 |
T |
A |
3: 104,702,634 (GRCm39) |
|
probably benign |
Het |
| Myl12b |
A |
T |
17: 71,284,164 (GRCm39) |
N21K |
possibly damaging |
Het |
| Ncoa7 |
A |
T |
10: 30,538,360 (GRCm39) |
V675E |
probably damaging |
Het |
| Nt5c1b |
T |
C |
12: 10,425,444 (GRCm39) |
I255T |
probably damaging |
Het |
| Numa1 |
T |
A |
7: 101,661,083 (GRCm39) |
|
probably benign |
Het |
| Otop2 |
A |
T |
11: 115,217,806 (GRCm39) |
D214V |
possibly damaging |
Het |
| Plec |
C |
A |
15: 76,057,748 (GRCm39) |
G3928V |
probably damaging |
Het |
| Prkcz |
T |
C |
4: 155,356,047 (GRCm39) |
E176G |
probably damaging |
Het |
| Qdpr |
G |
A |
5: 45,592,018 (GRCm39) |
T106I |
possibly damaging |
Het |
| R3hdm2 |
T |
G |
10: 127,319,978 (GRCm39) |
M481R |
probably damaging |
Het |
| Setdb2 |
C |
T |
14: 59,639,764 (GRCm39) |
R709Q |
probably damaging |
Het |
| Skic2 |
C |
T |
17: 35,060,092 (GRCm39) |
V145M |
probably damaging |
Het |
| Slx4ip |
T |
A |
2: 136,842,120 (GRCm39) |
V15D |
probably damaging |
Het |
| Stat4 |
T |
C |
1: 52,142,024 (GRCm39) |
S624P |
probably damaging |
Het |
| Tecpr2 |
T |
A |
12: 110,935,321 (GRCm39) |
L1380Q |
probably damaging |
Het |
| Traf2 |
T |
C |
2: 25,415,004 (GRCm39) |
I286V |
possibly damaging |
Het |
| Vmn2r30 |
T |
C |
7: 7,340,408 (GRCm39) |
I29V |
possibly damaging |
Het |
| Wdr43 |
A |
G |
17: 71,959,843 (GRCm39) |
Q561R |
probably benign |
Het |
| Zfp607b |
T |
A |
7: 27,403,150 (GRCm39) |
F535L |
probably benign |
Het |
|
| Other mutations in Or13c3 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
R0048:Or13c3
|
UTSW |
4 |
52,856,196 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0048:Or13c3
|
UTSW |
4 |
52,856,196 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0826:Or13c3
|
UTSW |
4 |
52,855,566 (GRCm39) |
missense |
probably benign |
|
|
R0831:Or13c3
|
UTSW |
4 |
52,855,764 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R1772:Or13c3
|
UTSW |
4 |
52,855,730 (GRCm39) |
missense |
probably benign |
0.30 |
|
R1774:Or13c3
|
UTSW |
4 |
52,855,674 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1861:Or13c3
|
UTSW |
4 |
52,856,373 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2080:Or13c3
|
UTSW |
4 |
52,855,568 (GRCm39) |
missense |
probably benign |
0.20 |
|
R2242:Or13c3
|
UTSW |
4 |
52,855,769 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3777:Or13c3
|
UTSW |
4 |
52,855,636 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4492:Or13c3
|
UTSW |
4 |
52,855,764 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4748:Or13c3
|
UTSW |
4 |
52,856,076 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R4880:Or13c3
|
UTSW |
4 |
52,856,411 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4905:Or13c3
|
UTSW |
4 |
52,855,613 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5856:Or13c3
|
UTSW |
4 |
52,856,516 (GRCm39) |
start gained |
probably benign |
|
|
R6585:Or13c3
|
UTSW |
4 |
52,856,192 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R6862:Or13c3
|
UTSW |
4 |
52,855,695 (GRCm39) |
missense |
probably benign |
|
|
R7378:Or13c3
|
UTSW |
4 |
52,856,421 (GRCm39) |
missense |
probably benign |
|
|
R7649:Or13c3
|
UTSW |
4 |
52,855,692 (GRCm39) |
nonsense |
probably null |
|
|
R8793:Or13c3
|
UTSW |
4 |
52,856,490 (GRCm39) |
missense |
probably benign |
|
|
R9169:Or13c3
|
UTSW |
4 |
52,856,052 (GRCm39) |
missense |
probably damaging |
0.97 |
|
| Posted On |
2015-04-16 |
Incidental Mutation